RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 RNF125Q96EQ8 232 aa5.11□□□□□ -1.59
UBBP1-201ENST00000392399 PHYHIPLQ96FC7 376 aa5.11□□□□□ -1.59
UBBP1-201ENST00000392399 GRAMD2BQ96HH9 432 aa5.11□□□□□ -1.59
UBBP1-201ENST00000392399 RHPN1-AS1Q9BWJ2 59 aa5.11□□□□□ -1.59
UBBP1-201ENST00000392399 VSIRQ9H7M9 311 aa5.11□□□□□ -1.59
UBBP1-201ENST00000392399 UQCC1Q9NVA1 299 aa5.11□□□□□ -1.59
UBBP1-201ENST00000392399 AURKAIP1Q9NWT8 199 aaPredicted RBP5.11□□□□□ -1.59
UBBP1-201ENST00000392399 OR5AC2Q9NZP5 309 aa5.11□□□□□ -1.59
UBBP1-201ENST00000392399 MLXQ9UH92 298 aa5.11□□□□□ -1.59
UBBP1-201ENST00000392399 SLC45A2Q9UMX9 530 aa5.11□□□□□ -1.59
UBBP1-201ENST00000392399 KANTRA0A1W2PQU2 76 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 IGSF23A1L1A6 192 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 ZNF785A8K8V0 405 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 CHEK1O14757 476 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 TSPAN4O14817 238 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 MPDU1O75352 247 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 IFNA7P01567 189 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 AP2S1P53680 142 aaPredicted RBP5.1□□□□□ -1.59
UBBP1-201ENST00000392399 CMC4P56277 68 aaPredicted RBP5.1□□□□□ -1.59
UBBP1-201ENST00000392399 PAFAH1B2P68402 229 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 VWC2Q2TAL6 325 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 PXDC1Q5TGL8 231 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 BTNL8Q6UX41 500 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 CYP2G1PQ6ZSU1 146 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 GTSCR1Q86UQ5 136 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 HAPLN4Q86UW8 402 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 LILRB2Q8N423 598 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 TMEM217Q8N7C4 229 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 SPAG8Q99932 426 aaPredicted RBP5.1□□□□□ -1.59
UBBP1-201ENST00000392399 ARPC5LQ9BPX5 153 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 TMEM147Q9BVK8 224 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 ARL6Q9H0F7 186 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 RABAC1Q9UI14 185 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 RNF24Q9Y225 148 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 LSM4Q9Y4Z0 139 aaKnown RBP5.1□□□□□ -1.59
UBBP1-201ENST00000392399 U3KQE9 123 aa5.1□□□□□ -1.59
UBBP1-201ENST00000392399 IGHV3OR16-8A0A075B7F1 116 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 TRAV2A0A0B4J234 112 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 IZUMO1RA6ND01 250 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 HELTA6NFD8 242 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 OR4C46A6NHA9 309 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 AGPAT2O15120 278 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 ZNF207O43670 478 aaKnown RBP5.09□□□□□ -1.59
UBBP1-201ENST00000392399 BUB3O43684 328 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 RPL12P30050 165 aaKnown RBP5.09□□□□□ -1.59
UBBP1-201ENST00000392399 PLP1P60201 277 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 EWSR1Q01844 656 aaKnown RBP eCLIP5.09□□□□□ -1.59
UBBP1-201ENST00000392399 NHLH2Q02577 135 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 USF2Q15853 346 aaPredicted RBP5.09□□□□□ -1.59
UBBP1-201ENST00000392399 GUCA2BQ16661 112 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 C1orf194Q5T5A4 169 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 FAM90A2PQ658T7 463 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 TEX261Q6UWH6 196 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 TMEM61Q8N0U2 210 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 OR5C1Q8NGR4 320 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 ST8SIA2Q92186 375 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 RNF2Q99496 336 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 FAM110AQ9BQ89 295 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 PBDC1Q9BVG4 233 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 FBXL17Q9UF56 701 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 WDR83OSQ9Y284 106 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 SMAD5-AS1Q9Y6J3 95 aa5.09□□□□□ -1.59
UBBP1-201ENST00000392399 A8MZ25 164 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 K7EIL1 84 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 HYPMO75409 117 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 DFFBO76075 338 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 JTBO76095 146 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 APOHP02749 345 aaPredicted RBP5.08□□□□□ -1.6
UBBP1-201ENST00000392399 TPT1P13693 172 aaKnown RBP5.08□□□□□ -1.6
UBBP1-201ENST00000392399 EDN2P20800 178 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 RPL29P47914 159 aaKnown RBP5.08□□□□□ -1.6
UBBP1-201ENST00000392399 CAMLGP49069 296 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 LYZP61626 148 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 DEFB121Q5J5C9 76 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 EIF5AL1Q6IS14 154 aaKnown RBP5.08□□□□□ -1.6
UBBP1-201ENST00000392399 C16orf54Q6UWD8 224 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 Q6ZRG5 221 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 TCF24Q7RTU0 167 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 Q8N1Y9 231 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 ZNF680Q8NEM1 530 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 LRRC20Q8TCA0 184 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 MRAPQ8TCY5 172 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 GPR82Q96P67 336 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 PRR25Q96S07 402 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 PARD6GQ9BYG4 376 aaPredicted RBP5.08□□□□□ -1.6
UBBP1-201ENST00000392399 SEPSECSQ9HD40 501 aaKnown RBP5.08□□□□□ -1.6
UBBP1-201ENST00000392399 UBQLN2Q9UHD9 624 aa5.08□□□□□ -1.6
UBBP1-201ENST00000392399 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
UBBP1-201ENST00000392399 IGHV3OR16-13A0A075B7E8 117 aa5.07□□□□□ -1.6
UBBP1-201ENST00000392399 IGHV3-49A0A0A0MS15 119 aa5.07□□□□□ -1.6
UBBP1-201ENST00000392399 BORCS7-ASMTA0A0B4J1R7 106 aa5.07□□□□□ -1.6
UBBP1-201ENST00000392399 IGHV3-74A0A0B4J1X5 117 aa5.07□□□□□ -1.6
UBBP1-201ENST00000392399 C17orf112F2Z3M2 114 aa5.07□□□□□ -1.6
UBBP1-201ENST00000392399 DNASE2O00115 360 aaPredicted RBP5.07□□□□□ -1.6
UBBP1-201ENST00000392399 IFNA5P01569 189 aa5.07□□□□□ -1.6
UBBP1-201ENST00000392399 PRB2P02812 416 aaPredicted RBP5.07□□□□□ -1.6
UBBP1-201ENST00000392399 LINC00869P0C866 280 aa5.07□□□□□ -1.6
UBBP1-201ENST00000392399 ORM2P19652 201 aa5.07□□□□□ -1.6
UBBP1-201ENST00000392399 GATA2P23769 480 aaPredicted RBP5.07□□□□□ -1.6
UBBP1-201ENST00000392399 CD81P60033 236 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms