RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 PAX9P55771 341 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 FOXL2NBQ6ZUU3 175 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 GTSCR1Q86UQ5 136 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 PPP1R27Q86WC6 154 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 PLXNA3P51805 1871 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 FAM201AQ5SY85 155 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 CLPSP04118 112 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 RHOGP84095 191 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 TMEM95Q3KNT9 176 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 YAE1D1Q9NRH1 226 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 COL6A6A6NMZ7 2263 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 LAGE3Q14657 143 aa16.18■□□□□ 0.18
SHANK1-203ENST00000391813 CELA3BP08861 270 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 SNRPD3P62318 126 aaKnown RBP16.17■□□□□ 0.18
SHANK1-203ENST00000391813 IGHV2-26A0A0B4J1V2 119 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 PSPNO60542 156 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 IGKV3-15P01624 115 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 TRGV9Q99603 122 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 SLC25A39Q9BZJ4 359 aaPredicted RBP16.17■□□□□ 0.18
SHANK1-203ENST00000391813 RPUSD1Q9UJJ7 312 aaKnown RBP16.17■□□□□ 0.18
SHANK1-203ENST00000391813 TNFRSF18Q9Y5U5 241 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 DOCK11Q5JSL3 2073 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 LOC105371242A0A075B767 164 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 C9orf118A6NHY6 69 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 SPINK8P0C7L1 97 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 LIME1Q9H400 295 aa16.17■□□□□ 0.18
SHANK1-203ENST00000391813 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.16■□□□□ 0.18
SHANK1-203ENST00000391813 JMJD8Q96S16 334 aa16.16■□□□□ 0.18
SHANK1-203ENST00000391813 NPFFO15130 113 aa16.16■□□□□ 0.18
SHANK1-203ENST00000391813 CDKN1BP46527 198 aa16.16■□□□□ 0.18
SHANK1-203ENST00000391813 NBASA2RRP1 2371 aa16.16■□□□□ 0.18
SHANK1-203ENST00000391813 K7EP13 123 aa16.16■□□□□ 0.18
SHANK1-203ENST00000391813 Q6ZS92 163 aa16.16■□□□□ 0.18
SHANK1-203ENST00000391813 SRRM5B3KS81 715 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 ZNF726P1Q15940 193 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 CT83Q5H943 113 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 ZC2HC1BQ5TFG8 222 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 TCF20Q9UGU0 1960 aaKnown RBP16.15■□□□□ 0.18
SHANK1-203ENST00000391813 IGHV3OR16-13A0A075B7E8 117 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 IGHV3-74A0A0B4J1X5 117 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 IFI27P40305 119 aaPredicted RBP16.15■□□□□ 0.18
SHANK1-203ENST00000391813 TOMM40O96008 361 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 PLAURQ03405 335 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 RNF182Q8N6D2 247 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 SELENOKQ9Y6D0 94 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 FAM71F2Q6NXP2 309 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 CHAC1Q9BUX1 264 aa16.15■□□□□ 0.18
SHANK1-203ENST00000391813 STPG4Q8N801 248 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 PRSS33Q8NF86 280 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 Q6P435 159 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 IGHV4-39P01824 125 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 IGLL1P15814 213 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 SSBP2P81877 361 aaPredicted RBP16.14■□□□□ 0.17
SHANK1-203ENST00000391813 BSPH1Q075Z2 132 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 LYPD1Q8N2G4 141 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 RAX2Q96IS3 184 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 K7ENP7 123 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 LYZL1Q6UWQ5 148 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 PYGO2Q9BRQ0 406 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 ZNF581Q9P0T4 197 aa16.14■□□□□ 0.17
SHANK1-203ENST00000391813 OR13C6PQ8NH95 151 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 TRAV21A0A0B4J279 112 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 LINC00473A8K010 186 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 TMEM238C9JI98 176 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 CCL3L1P16619 93 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 EVI2AP22794 236 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 ATXN8Q156A1 80 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 DOCK8Q8NF50 2099 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 TNFRSF14Q92956 283 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 S4R3C0 116 aa16.13■□□□□ 0.17
SHANK1-203ENST00000391813 NBR2O15453 112 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 ZNF492Q9P255 531 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 SPTAN1Q13813 2472 aaKnown RBP16.12■□□□□ 0.17
SHANK1-203ENST00000391813 TRAV2A0A0B4J234 112 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 IGKV1D-33P01593 117 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 IGKV1-33P01594 117 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 SELLP14151 372 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 FAM231DQ6ZW35 169 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 MDS2Q8NDY4 140 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 TMEM167AQ8TBQ9 72 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 COL4A6Q14031 1691 aa16.12■□□□□ 0.17
SHANK1-203ENST00000391813 CDPF1Q6NVV7 123 aa16.11■□□□□ 0.17
SHANK1-203ENST00000391813 NPIPB5A8MRT5 1133 aa16.11■□□□□ 0.17
SHANK1-203ENST00000391813 GGNQ86UU5 652 aa16.11■□□□□ 0.17
SHANK1-203ENST00000391813 MBNL3Q9NUK0 354 aaKnown RBP16.11■□□□□ 0.17
SHANK1-203ENST00000391813 WNK2Q9Y3S1 2297 aa16.11■□□□□ 0.17
SHANK1-203ENST00000391813 KIAA2026Q5HYC2 2103 aa16.11■□□□□ 0.17
SHANK1-203ENST00000391813 K7EP34 96 aa16.11■□□□□ 0.17
SHANK1-203ENST00000391813 ZNF138P52744 262 aa16.11■□□□□ 0.17
SHANK1-203ENST00000391813 CD300EQ496F6 205 aaPredicted RBP16.11■□□□□ 0.17
SHANK1-203ENST00000391813 TMEM133Q9H2Q1 129 aa16.11■□□□□ 0.17
SHANK1-203ENST00000391813 PMS2P5A8MQ11 134 aa16.1■□□□□ 0.17
SHANK1-203ENST00000391813 C17orf100A8MU93 164 aa16.1■□□□□ 0.17
SHANK1-203ENST00000391813 C5orf24Q7Z6I8 188 aa16.1■□□□□ 0.17
SHANK1-203ENST00000391813 SPRR3Q9UBC9 169 aa16.1■□□□□ 0.17
SHANK1-203ENST00000391813 FANCMQ8IYD8 2048 aa16.1■□□□□ 0.17
SHANK1-203ENST00000391813 TRAV3A0A0B4J244 114 aa16.1■□□□□ 0.17
SHANK1-203ENST00000391813 IGKV1-6A0A0C4DH72 117 aa16.1■□□□□ 0.17
SHANK1-203ENST00000391813 NCR2O95944 276 aa16.1■□□□□ 0.17
SHANK1-203ENST00000391813 COX8AP10176 69 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms