RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 UQCR10Q9UDW1 63 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 PLP1P60201 277 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 ZNF506Q5JVG8 444 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 SOD3P08294 240 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 SMIM13P0DJ93 91 aa12.2□□□□□ -0.46
LRRK1-201ENST00000388948 SRSF1Q07955 248 aaKnown RBP eCLIP12.19□□□□□ -0.46
LRRK1-201ENST00000388948 RHPN1-AS1Q9BWJ2 59 aa12.19□□□□□ -0.46
LRRK1-201ENST00000388948 RNASE7Q9H1E1 156 aaKnown RBP12.19□□□□□ -0.46
LRRK1-201ENST00000388948 JPT2Q9H910 190 aa12.19□□□□□ -0.46
LRRK1-201ENST00000388948 CEACAM8P31997 349 aaPredicted RBP12.19□□□□□ -0.46
LRRK1-201ENST00000388948 RPRMLQ8N4K4 120 aa12.19□□□□□ -0.46
LRRK1-201ENST00000388948 TSPAN13O95857 204 aa12.19□□□□□ -0.46
LRRK1-201ENST00000388948 PRTN3P24158 256 aa12.19□□□□□ -0.46
LRRK1-201ENST00000388948 DAD1P61803 113 aa12.19□□□□□ -0.46
LRRK1-201ENST00000388948 SDHCQ99643 169 aaPredicted RBP12.19□□□□□ -0.46
LRRK1-201ENST00000388948 SLC25A39Q9BZJ4 359 aaPredicted RBP12.19□□□□□ -0.46
LRRK1-201ENST00000388948 OVOL3O00110 214 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 CSRP3P50461 194 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 SMIM6P0DI80 62 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 GBF1Q92538 1859 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 A0A1B0GWJ7 208 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 DEFB131AP59861 70 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 REG4Q9BYZ8 158 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 LINC01619G3V211 115 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 PMCHL2Q9BQD1 86 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 MCRIP2Q9BUT9 160 aaKnown RBP12.18□□□□□ -0.46
LRRK1-201ENST00000388948 IGHV1-69DA0A0B4J2H0 117 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 IGHV1-69P01742 117 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 IFITM3Q01628 133 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 SCRT1Q9BWW7 348 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 C1orf122Q6ZSJ8 110 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 OR5A1Q8NGJ0 315 aa12.18□□□□□ -0.46
LRRK1-201ENST00000388948 DAZ1Q9NQZ3 744 aaKnown RBP12.18□□□□□ -0.46
LRRK1-201ENST00000388948 H0YJW9 148 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 GLRX5Q86SX6 157 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 NR2C2APQ86WQ0 139 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 TTC9CQ8N5M4 171 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 PRDM13Q9H4Q3 707 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 FAM90A9PA6NNJ1 464 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 CGB7P0DN87 165 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 DEFB104AQ8WTQ1 72 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 F2Z2F3 143 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 PUSL1Q8N0Z8 303 aaKnown RBP12.17□□□□□ -0.46
LRRK1-201ENST00000388948 IMMP2LQ96T52 175 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 ZNF876PQ49A33 203 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 PLA2G2CQ5R387 149 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 C18orf12Q96KH6 178 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 SIGLEC9Q9Y336 463 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 IZUMO1RA6ND01 250 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 UBE2E1P51965 193 aa12.17□□□□□ -0.46
LRRK1-201ENST00000388948 IGKV1-12A0A0C4DH73 117 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 IGKV1D-12P01611 117 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 C9orf139Q6ZV77 190 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 COQ2Q96H96 371 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 SNAI2O43623 268 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 APOC4P55056 127 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 EFNB3Q15768 340 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 EXOC3-AS1Q8N2X6 119 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 SHISA3A0PJX4 238 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 IGFL3Q6UXB1 125 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 LURAP1LQ8IV03 231 aa12.16□□□□□ -0.46
LRRK1-201ENST00000388948 NOTCH2Q04721 2471 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 TRAV5A0A0B4J249 113 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 TMEM249Q2WGJ8 235 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 NRN1Q9NPD7 142 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 Q5BKY6 102 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 XCL2Q9UBD3 114 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 J3QLI3 93 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 ZNF138P52744 262 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 ORMDL2Q53FV1 153 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 COL4A6Q14031 1691 aa12.15□□□□□ -0.46
LRRK1-201ENST00000388948 PLXND1Q9Y4D7 1925 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 A0A087WV48 116 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 B3GALT5-AS1P59052 145 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 SSBP4Q9BWG4 385 aaPredicted RBP12.14□□□□□ -0.47
LRRK1-201ENST00000388948 CFHR3Q02985 330 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 LINC00477Q96M19 166 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 IGKV1D-17A0A075B6S4 117 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 LDLRAD4O15165 306 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 CCL20P78556 96 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 TTC32Q5I0X7 151 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 FAM169BQ8N8A8 192 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 THSD7BQ9C0I4 1608 aa12.14□□□□□ -0.47
LRRK1-201ENST00000388948 GAS1P54826 345 aa12.13□□□□□ -0.47
LRRK1-201ENST00000388948 A0A1W2PRE2 83 aa12.13□□□□□ -0.47
LRRK1-201ENST00000388948 DYSFO75923 2080 aa12.13□□□□□ -0.47
LRRK1-201ENST00000388948 HGFACQ04756 655 aa12.13□□□□□ -0.47
LRRK1-201ENST00000388948 WISP1O95388 367 aa12.13□□□□□ -0.47
LRRK1-201ENST00000388948 CA1P00915 261 aaPredicted RBP12.13□□□□□ -0.47
LRRK1-201ENST00000388948 C1orf159Q96HA4 380 aa12.13□□□□□ -0.47
LRRK1-201ENST00000388948 IGHV2-70DA0A0C4DH43 119 aa12.13□□□□□ -0.47
LRRK1-201ENST00000388948 K7ERU9 68 aa12.13□□□□□ -0.47
LRRK1-201ENST00000388948 IGKV1-27A0A075B6S5 117 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 ZNF98A6NK75 572 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 C6orf226Q5I0X4 101 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 A0A0A6YYD4 124 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 TRAV2A0A0B4J234 112 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 LYPD3O95274 346 aa12.12□□□□□ -0.47
LRRK1-201ENST00000388948 PLNP26678 52 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms