RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 ZNF48Q96MX3 618 aaPredicted RBP16.88■□□□□ 0.29
CNTFR-202ENST00000378980 SHANK2-AS3Q9BTD1 123 aa16.88■□□□□ 0.29
CNTFR-202ENST00000378980 ZNF586Q9NXT0 402 aa16.88■□□□□ 0.29
CNTFR-202ENST00000378980 RPH3ALQ9UNE2 315 aa16.88■□□□□ 0.29
CNTFR-202ENST00000378980 A0A1B0GUS0 222 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 H3BRN7 92 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 CA1P00915 261 aaPredicted RBP16.87■□□□□ 0.29
CNTFR-202ENST00000378980 ZNF491Q8N8L2 437 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 FAM168AQ92567 244 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 RNF125Q96EQ8 232 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 GATCO43716 136 aaKnown RBP16.87■□□□□ 0.29
CNTFR-202ENST00000378980 SPINK4O60575 86 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 TCRAP04437 139 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 JOSD1Q15040 202 aaPredicted RBP16.87■□□□□ 0.29
CNTFR-202ENST00000378980 WDR73Q6P4I2 378 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 TMEM256Q8N2U0 113 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 NUDT10Q8NFP7 164 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 NUDT11Q96G61 164 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 FMC1Q96HJ9 113 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 GPR82Q96P67 336 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 OTORQ9NRC9 128 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 S4R3C0 116 aa16.87■□□□□ 0.29
CNTFR-202ENST00000378980 TRAV30A0A087WSZ9 112 aa16.86■□□□□ 0.29
CNTFR-202ENST00000378980 MT-ND6P03923 174 aa16.86■□□□□ 0.29
CNTFR-202ENST00000378980 FAM106CPP0CH98 169 aa16.86■□□□□ 0.29
CNTFR-202ENST00000378980 MFAP4P55083 255 aa16.86■□□□□ 0.29
CNTFR-202ENST00000378980 SLC35B1P78383 322 aa16.86■□□□□ 0.29
CNTFR-202ENST00000378980 COX19Q49B96 90 aa16.86■□□□□ 0.29
CNTFR-202ENST00000378980 Q8N9W7 124 aa16.86■□□□□ 0.29
CNTFR-202ENST00000378980 SGK494Q96LW2 274 aa16.86■□□□□ 0.29
CNTFR-202ENST00000378980 PRDM13Q9H4Q3 707 aa16.86■□□□□ 0.29
CNTFR-202ENST00000378980 IGHV7-81A0A0B4J1V7 117 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 WI2-2373I1.2A0A1W2PRP0 233 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 GRIFINA4D1Z8 144 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 IZUMO1RA6ND01 250 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 GNG7O60262 68 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 IGHV4-39P01824 125 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 IL4P05112 153 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 PRR27Q6MZM9 219 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 TMEM136Q6ZRR5 245 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 OR5R1Q8NH85 324 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 MLST8Q9BVC4 326 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 F8W735 103 aaPredicted RBP16.85■□□□□ 0.29
CNTFR-202ENST00000378980 EGR2P11161 476 aaPredicted RBP16.85■□□□□ 0.29
CNTFR-202ENST00000378980 FAM120AOSQ5T036 256 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 GRAMD2BQ96HH9 432 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 C1RLQ9NZP8 487 aa16.85■□□□□ 0.29
CNTFR-202ENST00000378980 TMEM8BA6NDV4 472 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 LTAP01374 205 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 AMY1AP04745 511 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 CRISP2P16562 243 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 SAA4P35542 130 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 BPIFA4PQ86YQ2 179 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 CHRDL1Q9BU40 450 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 CSMD1Q96PZ7 3565 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 GZMBP10144 247 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 CTAG1AP78358 180 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 LPAR2Q9HBW0 351 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 NAT8BQ9UHF3 227 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 TP53TG3Q9ULZ0 132 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 CFAP46Q8IYW2 2715 aa16.84■□□□□ 0.29
CNTFR-202ENST00000378980 NUPR1O60356 82 aa16.83■□□□□ 0.28
CNTFR-202ENST00000378980 HLA-DRB1P01911 266 aa16.83■□□□□ 0.28
CNTFR-202ENST00000378980 MRPL54Q6P161 138 aaKnown RBP16.83■□□□□ 0.28
CNTFR-202ENST00000378980 C21orf62Q9NYP8 219 aa16.83■□□□□ 0.28
CNTFR-202ENST00000378980 THYN1Q9P016 225 aa16.83■□□□□ 0.28
CNTFR-202ENST00000378980 IGLC2P0DOY2 106 aa16.82■□□□□ 0.28
CNTFR-202ENST00000378980 BRS3P32247 399 aa16.82■□□□□ 0.28
CNTFR-202ENST00000378980 RNF24Q9Y225 148 aa16.82■□□□□ 0.28
CNTFR-202ENST00000378980 TRBV19A0A075B6N1 114 aa16.82■□□□□ 0.28
CNTFR-202ENST00000378980 NDUFB8O95169 186 aa16.82■□□□□ 0.28
CNTFR-202ENST00000378980 Q56UQ5 140 aa16.82■□□□□ 0.28
CNTFR-202ENST00000378980 EXOC3-AS1Q8N2X6 119 aa16.82■□□□□ 0.28
CNTFR-202ENST00000378980 OR4F17Q8NGA8 305 aa16.82■□□□□ 0.28
CNTFR-202ENST00000378980 TMEM190Q8WZ59 177 aa16.82■□□□□ 0.28
CNTFR-202ENST00000378980 USF2Q15853 346 aaPredicted RBP16.81■□□□□ 0.28
CNTFR-202ENST00000378980 POLR3KQ9Y2Y1 108 aaPredicted RBP16.81■□□□□ 0.28
CNTFR-202ENST00000378980 MRPS12O15235 138 aaKnown RBP16.81■□□□□ 0.28
CNTFR-202ENST00000378980 OR2J3O76001 311 aa16.81■□□□□ 0.28
CNTFR-202ENST00000378980 HLA-DQA1P01909 254 aa16.81■□□□□ 0.28
CNTFR-202ENST00000378980 LINC00310P59036 64 aa16.81■□□□□ 0.28
CNTFR-202ENST00000378980 CMTM2Q8TAZ6 248 aa16.81■□□□□ 0.28
CNTFR-202ENST00000378980 TSKUQ8WUA8 353 aa16.81■□□□□ 0.28
CNTFR-202ENST00000378980 HSPB9Q9BQS6 159 aa16.81■□□□□ 0.28
CNTFR-202ENST00000378980 ABCA2Q9BZC7 2435 aa16.8■□□□□ 0.28
CNTFR-202ENST00000378980 NPFFO15130 113 aa16.8■□□□□ 0.28
CNTFR-202ENST00000378980 FCGR2BP31994 310 aaPredicted RBP16.8■□□□□ 0.28
CNTFR-202ENST00000378980 Q0VG73 95 aa16.8■□□□□ 0.28
CNTFR-202ENST00000378980 Q86TA4 180 aa16.8■□□□□ 0.28
CNTFR-202ENST00000378980 NUP35Q8NFH5 326 aa16.8■□□□□ 0.28
CNTFR-202ENST00000378980 SVEP1Q4LDE5 3571 aa16.8■□□□□ 0.28
CNTFR-202ENST00000378980 ESDP10768 282 aa16.79■□□□□ 0.28
CNTFR-202ENST00000378980 RAB4BP61018 213 aa16.79■□□□□ 0.28
CNTFR-202ENST00000378980 RASL11AQ6T310 242 aa16.79■□□□□ 0.28
CNTFR-202ENST00000378980 S100A7AQ86SG5 101 aa16.79■□□□□ 0.28
CNTFR-202ENST00000378980 PIP4P2Q8N4L2 257 aa16.79■□□□□ 0.28
CNTFR-202ENST00000378980 WIPF2Q8TF74 440 aaPredicted RBP16.79■□□□□ 0.28
CNTFR-202ENST00000378980 C17orf77Q96MU5 243 aa16.79■□□□□ 0.28
CNTFR-202ENST00000378980 ZNF492Q9P255 531 aa16.79■□□□□ 0.28
CNTFR-202ENST00000378980 SIGLEC15Q6ZMC9 328 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms