RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 WDR83OSQ9Y284 106 aa12.58□□□□□ -0.4
FXN-201ENST00000377270 YTHDF2Q9Y5A9 579 aaKnown RBP12.58□□□□□ -0.4
FXN-201ENST00000377270 FNDC10F2Z333 226 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 TFF1P04155 84 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 LCNL1Q6ZST4 164 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 MAP1LC3CQ9BXW4 147 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 TMEM30CPA0ZSE6 113 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 Q6ZR03 302 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 DRAM1Q8N682 238 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 C11orf52Q96A22 123 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 TMEM133Q9H2Q1 129 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 DKK4Q9UBT3 224 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 PRO0461Q9UI25 63 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 PROCRQ9UNN8 238 aa12.57□□□□□ -0.4
FXN-201ENST00000377270 INTS1Q8N201 2190 aaKnown RBP12.56□□□□□ -0.4
FXN-201ENST00000377270 RRHO14718 337 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 CT45A6P0DMU7 189 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 CT45A5P0DMU8 189 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 CT45A7P0DMV0 189 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 PSG5Q15238 335 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 CT45A1Q5HYN5 189 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 FAM159AQ6UWV7 190 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 AMTNQ6UX39 209 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 CT45A3Q8NHU0 189 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 ZDHHC16Q969W1 377 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 PIMREGQ9BSJ6 248 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 ZNF331Q9NQX6 463 aaPredicted RBP12.56□□□□□ -0.4
FXN-201ENST00000377270 BOD1L1Q8NFC6 3051 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 TEX45Q8NA69 505 aa12.56□□□□□ -0.4
FXN-201ENST00000377270 ZNF71Q9NQZ8 489 aaPredicted RBP12.56□□□□□ -0.4
FXN-201ENST00000377270 CACNA1DQ01668 2161 aa12.55□□□□□ -0.4
FXN-201ENST00000377270 CACNA1GO43497 2377 aa12.55□□□□□ -0.4
FXN-201ENST00000377270 THBDP07204 575 aa12.55□□□□□ -0.4
FXN-201ENST00000377270 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
FXN-201ENST00000377270 FAM53AQ6NSI3 398 aaPredicted RBP12.55□□□□□ -0.4
FXN-201ENST00000377270 OR5AN1Q8NGI8 311 aa12.55□□□□□ -0.4
FXN-201ENST00000377270 RNASE7Q9H1E1 156 aaKnown RBP12.55□□□□□ -0.4
FXN-201ENST00000377270 IGHV1-18A0A0C4DH31 117 aa12.55□□□□□ -0.4
FXN-201ENST00000377270 C12orf77C9JDV5 145 aa12.55□□□□□ -0.4
FXN-201ENST00000377270 P0C879 139 aa12.55□□□□□ -0.4
FXN-201ENST00000377270 OR4X2Q8NGF9 303 aa12.55□□□□□ -0.4
FXN-201ENST00000377270 RHODO00212 210 aa12.54□□□□□ -0.4
FXN-201ENST00000377270 TCTAP57738 103 aa12.54□□□□□ -0.4
FXN-201ENST00000377270 TAS2R45P59539 299 aa12.54□□□□□ -0.4
FXN-201ENST00000377270 HEATR1Q9H583 2144 aaKnown RBP12.54□□□□□ -0.4
FXN-201ENST00000377270 IGLV1-44P01699 117 aa12.54□□□□□ -0.4
FXN-201ENST00000377270 OPRK1P41145 380 aa12.54□□□□□ -0.4
FXN-201ENST00000377270 OR9G4Q8NGQ1 327 aa12.54□□□□□ -0.4
FXN-201ENST00000377270 ZNF318Q5VUA4 2279 aa12.54□□□□□ -0.4
FXN-201ENST00000377270 LAMA5O15230 3695 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 TRAV5A0A0B4J249 113 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 OOEPA6NGQ2 149 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 TMEM78Q5T7P6 136 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 SEM1Q6ZVN7 128 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 COQ2Q96H96 371 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 METRNQ9UJH8 293 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 SMAD7O15105 426 aaKnown RBP12.53□□□□□ -0.4
FXN-201ENST00000377270 MPDU1O75352 247 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 FCN3O75636 299 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 SRD5A1P18405 259 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 GCHFRP30047 84 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 LINC01545Q5VT33 79 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 NFE4Q86UQ8 179 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 MOGAT3Q86VF5 341 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 ZNF808Q8N4W9 903 aaPredicted RBP12.53□□□□□ -0.4
FXN-201ENST00000377270 ZNF645Q8N7E2 425 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 RAB9BQ9NP90 201 aa12.53□□□□□ -0.4
FXN-201ENST00000377270 E9PLD3 99 aa12.52□□□□□ -0.4
FXN-201ENST00000377270 CHEK1O14757 476 aa12.52□□□□□ -0.4
FXN-201ENST00000377270 GCSHP23434 173 aa12.52□□□□□ -0.4
FXN-201ENST00000377270 FXYD2P54710 66 aa12.52□□□□□ -0.4
FXN-201ENST00000377270 C3orf56Q8N813 242 aa12.52□□□□□ -0.4
FXN-201ENST00000377270 ADTRPQ96IZ2 230 aa12.52□□□□□ -0.4
FXN-201ENST00000377270 DIDO1Q9BTC0 2240 aaKnown RBP12.52□□□□□ -0.41
FXN-201ENST00000377270 IGHG4P01861 327 aa12.52□□□□□ -0.41
FXN-201ENST00000377270 SLC25A5P05141 298 aaKnown RBP12.52□□□□□ -0.41
FXN-201ENST00000377270 ZNF816Q0VGE8 651 aaPredicted RBP12.52□□□□□ -0.41
FXN-201ENST00000377270 SPINK9Q5DT21 86 aa12.52□□□□□ -0.41
FXN-201ENST00000377270 CENPWQ5EE01 88 aa12.52□□□□□ -0.41
FXN-201ENST00000377270 GDF5OSQ5U4N7 250 aa12.52□□□□□ -0.41
FXN-201ENST00000377270 MBNL2Q5VZF2 373 aaKnown RBP12.52□□□□□ -0.41
FXN-201ENST00000377270 PRR7Q8TB68 274 aa12.52□□□□□ -0.41
FXN-201ENST00000377270 PHLDA1Q8WV24 401 aaPredicted RBP12.52□□□□□ -0.41
FXN-201ENST00000377270 DNAJC30Q96LL9 226 aa12.52□□□□□ -0.41
FXN-201ENST00000377270 MAP1LC3AQ9H492 121 aa12.52□□□□□ -0.41
FXN-201ENST00000377270 DUSP13Q9UII6 198 aa12.52□□□□□ -0.41
FXN-201ENST00000377270 ZNF292O60281 2723 aa12.52□□□□□ -0.41
FXN-201ENST00000377270 RIF1Q5UIP0 2472 aaKnown RBP12.51□□□□□ -0.41
FXN-201ENST00000377270 LOC107984640A0A0U1RRK4 108 aa12.51□□□□□ -0.41
FXN-201ENST00000377270 C15orf62A8K5M9 175 aa12.51□□□□□ -0.41
FXN-201ENST00000377270 PTPRBP23467 1997 aa12.51□□□□□ -0.41
FXN-201ENST00000377270 SMIM27A0A1W2PRY6 76 aa12.51□□□□□ -0.41
FXN-201ENST00000377270 MBD3L4A6NDZ8 208 aaPredicted RBP12.51□□□□□ -0.41
FXN-201ENST00000377270 MBD3L3A6NE82 208 aaPredicted RBP12.51□□□□□ -0.41
FXN-201ENST00000377270 MBD3L5A6NJ08 208 aaPredicted RBP12.51□□□□□ -0.41
FXN-201ENST00000377270 RPL7P18124 248 aaKnown RBP12.51□□□□□ -0.41
FXN-201ENST00000377270 RTL8BQ17RB0 113 aa12.51□□□□□ -0.41
FXN-201ENST00000377270 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
FXN-201ENST00000377270 MBD3L2Q8NHZ7 208 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms