RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 LTAP01374 205 aa20.18■□□□□ 0.82
C9orf40-201ENST00000376854 WNT10AQ9GZT5 417 aa20.18■□□□□ 0.82
C9orf40-201ENST00000376854 TCRAP04437 139 aa20.17■□□□□ 0.82
C9orf40-201ENST00000376854 SCNM1Q9BWG6 230 aa20.17■□□□□ 0.82
C9orf40-201ENST00000376854 HIGD1AQ9Y241 93 aa20.17■□□□□ 0.82
C9orf40-201ENST00000376854 A6NNC1 897 aa20.16■□□□□ 0.82
C9orf40-201ENST00000376854 PAX2Q02962 417 aa20.16■□□□□ 0.82
C9orf40-201ENST00000376854 OR2D3Q8NGH3 330 aa20.16■□□□□ 0.82
C9orf40-201ENST00000376854 CLEC7AQ9BXN2 247 aa20.16■□□□□ 0.82
C9orf40-201ENST00000376854 PRSS22Q9GZN4 317 aa20.16■□□□□ 0.82
C9orf40-201ENST00000376854 PTPRQQ9UMZ3 2332 aa20.16■□□□□ 0.82
C9orf40-201ENST00000376854 FBXL15Q9H469 300 aa20.16■□□□□ 0.82
C9orf40-201ENST00000376854 B9A039 149 aa20.15■□□□□ 0.82
C9orf40-201ENST00000376854 LYNX1G3V0Z9 82 aa20.15■□□□□ 0.82
C9orf40-201ENST00000376854 P01737 135 aa20.15■□□□□ 0.82
C9orf40-201ENST00000376854 LYNX1P0DP58 116 aa20.15■□□□□ 0.82
C9orf40-201ENST00000376854 LYZP61626 148 aa20.15■□□□□ 0.82
C9orf40-201ENST00000376854 HBBP68871 147 aa20.15■□□□□ 0.82
C9orf40-201ENST00000376854 RNASEKQ6P5S7 137 aaKnown RBP20.15■□□□□ 0.82
C9orf40-201ENST00000376854 A8MWL6 223 aa20.15■□□□□ 0.82
C9orf40-201ENST00000376854 M0R2Z0 102 aa20.15■□□□□ 0.82
C9orf40-201ENST00000376854 UQCR10Q9UDW1 63 aa20.15■□□□□ 0.82
C9orf40-201ENST00000376854 PSG1P11464 419 aa20.14■□□□□ 0.82
C9orf40-201ENST00000376854 COX7A1P24310 79 aa20.14■□□□□ 0.82
C9orf40-201ENST00000376854 MMDQ15546 238 aa20.14■□□□□ 0.82
C9orf40-201ENST00000376854 PRR31Q5SQ13 230 aa20.14■□□□□ 0.82
C9orf40-201ENST00000376854 C19orf71A6NCJ1 209 aa20.14■□□□□ 0.81
C9orf40-201ENST00000376854 FAM181BA6NEQ2 426 aa20.14■□□□□ 0.81
C9orf40-201ENST00000376854 CT83Q5H943 113 aa20.14■□□□□ 0.81
C9orf40-201ENST00000376854 LCN12Q6JVE5 192 aa20.14■□□□□ 0.81
C9orf40-201ENST00000376854 ZNF492Q9P255 531 aa20.14■□□□□ 0.81
C9orf40-201ENST00000376854 K7ENP7 123 aa20.13■□□□□ 0.81
C9orf40-201ENST00000376854 IGLC1P0CG04 106 aa20.13■□□□□ 0.81
C9orf40-201ENST00000376854 IGLC2P0DOY2 106 aa20.13■□□□□ 0.81
C9orf40-201ENST00000376854 IGLC3P0DOY3 106 aa20.13■□□□□ 0.81
C9orf40-201ENST00000376854 GTSF1Q8WW33 167 aa20.13■□□□□ 0.81
C9orf40-201ENST00000376854 SRSF12Q8WXF0 261 aaKnown RBP20.13■□□□□ 0.81
C9orf40-201ENST00000376854 RPEQ96AT9 228 aa20.13■□□□□ 0.81
C9orf40-201ENST00000376854 CD3EP07766 207 aa20.13■□□□□ 0.81
C9orf40-201ENST00000376854 ATOH7Q8N100 152 aa20.13■□□□□ 0.81
C9orf40-201ENST00000376854 DAZAP1Q96EP5 407 aaKnown RBP20.13■□□□□ 0.81
C9orf40-201ENST00000376854 LRBAP50851 2863 aa20.12■□□□□ 0.81
C9orf40-201ENST00000376854 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.12■□□□□ 0.81
C9orf40-201ENST00000376854 PGLYRP4Q96LB8 373 aa20.12■□□□□ 0.81
C9orf40-201ENST00000376854 TMEM208Q9BTX3 173 aa20.11■□□□□ 0.81
C9orf40-201ENST00000376854 SLC25A39Q9BZJ4 359 aaPredicted RBP20.11■□□□□ 0.81
C9orf40-201ENST00000376854 LPAR2Q9HBW0 351 aa20.11■□□□□ 0.81
C9orf40-201ENST00000376854 PPIAL4CA0A0B4J2A2 164 aa20.11■□□□□ 0.81
C9orf40-201ENST00000376854 PPIAL4GP0DN37 164 aa20.11■□□□□ 0.81
C9orf40-201ENST00000376854 PLGLAQ15195 96 aa20.11■□□□□ 0.81
C9orf40-201ENST00000376854 EBLN2Q6P2I7 272 aa20.11■□□□□ 0.81
C9orf40-201ENST00000376854 TXN2Q99757 166 aa20.11■□□□□ 0.81
C9orf40-201ENST00000376854 OTORQ9NRC9 128 aa20.11■□□□□ 0.81
C9orf40-201ENST00000376854 TACC2O95359 2948 aa20.11■□□□□ 0.81
C9orf40-201ENST00000376854 I3L2K1 104 aa20.1■□□□□ 0.81
C9orf40-201ENST00000376854 PMCHL1Q16048 86 aa20.1■□□□□ 0.81
C9orf40-201ENST00000376854 RBM14Q96PK6 669 aaKnown RBP20.1■□□□□ 0.81
C9orf40-201ENST00000376854 RASL11BQ9BPW5 248 aa20.1■□□□□ 0.81
C9orf40-201ENST00000376854 SOX21Q9Y651 276 aaPredicted RBP20.1■□□□□ 0.81
C9orf40-201ENST00000376854 DCHS2Q6V1P9 2916 aa20.1■□□□□ 0.81
C9orf40-201ENST00000376854 RBP4P02753 201 aa20.1■□□□□ 0.81
C9orf40-201ENST00000376854 Q6ZN92 141 aa20.1■□□□□ 0.81
C9orf40-201ENST00000376854 KLHDC1Q8N7A1 406 aa20.1■□□□□ 0.81
C9orf40-201ENST00000376854 TMEM14CQ9P0S9 112 aa20.1■□□□□ 0.81
C9orf40-201ENST00000376854 SPTA1P02549 2419 aa20.1■□□□□ 0.81
C9orf40-201ENST00000376854 TRAV8-1A0A0A6YYK1 113 aa20.09■□□□□ 0.81
C9orf40-201ENST00000376854 RBPJQ06330 500 aa20.09■□□□□ 0.81
C9orf40-201ENST00000376854 Q86TA4 180 aa20.09■□□□□ 0.81
C9orf40-201ENST00000376854 GFRA4Q9GZZ7 299 aa20.09■□□□□ 0.81
C9orf40-201ENST00000376854 BTF3P20290 206 aaKnown RBP20.09■□□□□ 0.81
C9orf40-201ENST00000376854 MAJINQ3KP22 176 aa20.09■□□□□ 0.81
C9orf40-201ENST00000376854 OR8B3Q8NGG8 313 aa20.09■□□□□ 0.81
C9orf40-201ENST00000376854 OR8B2Q96RD0 313 aa20.09■□□□□ 0.81
C9orf40-201ENST00000376854 RBPMS2Q6ZRY4 209 aaKnown RBP20.08■□□□□ 0.81
C9orf40-201ENST00000376854 EXOC3-AS1Q8N2X6 119 aa20.08■□□□□ 0.81
C9orf40-201ENST00000376854 LINC01560Q8TB33 94 aa20.08■□□□□ 0.81
C9orf40-201ENST00000376854 DLEU1O43261 78 aa20.08■□□□□ 0.8
C9orf40-201ENST00000376854 HNRNPA3P51991 378 aaKnown RBP20.08■□□□□ 0.8
C9orf40-201ENST00000376854 FOXA3P55318 350 aaPredicted RBP20.08■□□□□ 0.8
C9orf40-201ENST00000376854 Q56UQ5 140 aa20.08■□□□□ 0.8
C9orf40-201ENST00000376854 COL5A1-AS1Q5SY13 56 aa20.08■□□□□ 0.8
C9orf40-201ENST00000376854 URB1-AS1Q96HZ7 61 aa20.08■□□□□ 0.8
C9orf40-201ENST00000376854 MALRD1Q5VYJ5 2156 aa20.08■□□□□ 0.8
C9orf40-201ENST00000376854 IGF2RP11717 2491 aa20.07■□□□□ 0.8
C9orf40-201ENST00000376854 TOX4O94842 621 aa20.07■□□□□ 0.8
C9orf40-201ENST00000376854 CD24P25063 80 aa20.07■□□□□ 0.8
C9orf40-201ENST00000376854 GOLT1AQ6ZVE7 132 aa20.07■□□□□ 0.8
C9orf40-201ENST00000376854 CIARTQ8N365 385 aaPredicted RBP20.07■□□□□ 0.8
C9orf40-201ENST00000376854 C2orf70A6NJV1 201 aa20.07■□□□□ 0.8
C9orf40-201ENST00000376854 CNIH1O95406 144 aa20.06■□□□□ 0.8
C9orf40-201ENST00000376854 FOSL1P15407 271 aa20.06■□□□□ 0.8
C9orf40-201ENST00000376854 COL8A1P27658 744 aa20.06■□□□□ 0.8
C9orf40-201ENST00000376854 GRNP28799 593 aaKnown RBP20.06■□□□□ 0.8
C9orf40-201ENST00000376854 PRNTQ86SH4 94 aa20.06■□□□□ 0.8
C9orf40-201ENST00000376854 RNF5Q99942 180 aa20.06■□□□□ 0.8
C9orf40-201ENST00000376854 VKORC1Q9BQB6 163 aa20.06■□□□□ 0.8
C9orf40-201ENST00000376854 TPRP12270 2363 aaKnown RBP20.06■□□□□ 0.8
C9orf40-201ENST00000376854 NPIPB6E9PJ23 425 aa20.05■□□□□ 0.8
C9orf40-201ENST00000376854 LY6LH3BQJ8 138 aa20.05■□□□□ 0.8
C9orf40-201ENST00000376854 IGKV1-17P01599 117 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms