RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 GATA3P23771 443 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 IGF2BP2-AS1Q96M15 143 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 TCEAL7Q9BRU2 100 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 TMEM14CQ9P0S9 112 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 MAP1AP78559 2803 aaPredicted RBP13.16□□□□□ -0.3
HLA-A-202ENST00000376806 PEX7O00628 323 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 IGHV3-23P01764 117 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 NBEAP1P0C6P0 100 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 TMEM68Q96MH6 324 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 SHANK2-AS3Q9BTD1 123 aa13.16□□□□□ -0.3
HLA-A-202ENST00000376806 SOX21Q9Y651 276 aaPredicted RBP13.16□□□□□ -0.3
HLA-A-202ENST00000376806 LINC01548A6NM66 108 aa13.15□□□□□ -0.3
HLA-A-202ENST00000376806 TGOLN2O43493 480 aa13.15□□□□□ -0.3
HLA-A-202ENST00000376806 GGCTO75223 188 aaKnown RBP13.15□□□□□ -0.3
HLA-A-202ENST00000376806 RANP62826 216 aaKnown RBP13.15□□□□□ -0.3
HLA-A-202ENST00000376806 KCNIP4Q6PIL6 250 aa13.15□□□□□ -0.3
HLA-A-202ENST00000376806 LINC01356Q8N9X3 169 aa13.15□□□□□ -0.3
HLA-A-202ENST00000376806 OR10G8Q8NGN5 311 aa13.15□□□□□ -0.3
HLA-A-202ENST00000376806 CR1P17927 2039 aa13.15□□□□□ -0.3
HLA-A-202ENST00000376806 NAV2Q8IVL1 2488 aa13.15□□□□□ -0.3
HLA-A-202ENST00000376806 BAHCC1Q9P281 2608 aa13.15□□□□□ -0.31
HLA-A-202ENST00000376806 A0A1W2PPQ1 181 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 AVPP01185 164 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 AMY1AP04745 511 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 S100A6P06703 90 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 FCGR2BP31994 310 aaPredicted RBP13.14□□□□□ -0.31
HLA-A-202ENST00000376806 CNN1P51911 297 aaKnown RBP13.14□□□□□ -0.31
HLA-A-202ENST00000376806 VN1R17PQ8TDU5 208 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 TXN2Q99757 166 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 OR2T8A6NH00 312 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 G3V318 75 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 USF2Q15853 346 aaPredicted RBP13.14□□□□□ -0.31
HLA-A-202ENST00000376806 IMMP2LQ96T52 175 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 CDC42EP3Q9UKI2 254 aa13.14□□□□□ -0.31
HLA-A-202ENST00000376806 FLNBO75369 2602 aaKnown RBP13.14□□□□□ -0.31
HLA-A-202ENST00000376806 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
HLA-A-202ENST00000376806 H3BUX3 64 aa13.13□□□□□ -0.31
HLA-A-202ENST00000376806 TRGC2P03986 189 aa13.13□□□□□ -0.31
HLA-A-202ENST00000376806 SLC25A5P05141 298 aaKnown RBP13.13□□□□□ -0.31
HLA-A-202ENST00000376806 TAS2R60P59551 318 aa13.13□□□□□ -0.31
HLA-A-202ENST00000376806 SNRPEP62304 92 aaKnown RBP13.13□□□□□ -0.31
HLA-A-202ENST00000376806 GNG5P63218 68 aa13.13□□□□□ -0.31
HLA-A-202ENST00000376806 RHOGP84095 191 aa13.13□□□□□ -0.31
HLA-A-202ENST00000376806 C15orf32Q32M92 178 aa13.13□□□□□ -0.31
HLA-A-202ENST00000376806 SMUG1Q53HV7 270 aa13.13□□□□□ -0.31
HLA-A-202ENST00000376806 BEX4Q9NWD9 120 aaPredicted RBP13.13□□□□□ -0.31
HLA-A-202ENST00000376806 C5orf52A6NGY3 159 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 H3BTX0 84 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 IGLV2-8P01709 118 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 HIST1H1EP10412 219 aaKnown RBP13.12□□□□□ -0.31
HLA-A-202ENST00000376806 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 Q9H3A6 140 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 SRD5A3Q9H8P0 318 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 ZNF586Q9NXT0 402 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 PDZD2O15018 2839 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 PGPA6NDG6 321 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 A6NDX4 124 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 CTSGP08311 255 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
HLA-A-202ENST00000376806 OR5I1Q13606 314 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 LY6EQ16553 131 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 C19orf54Q5BKX5 351 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 BPIFA4PQ86YQ2 179 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 LINC00479Q96M42 142 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 EPDR1Q9UM22 224 aa13.12□□□□□ -0.31
HLA-A-202ENST00000376806 FAM3BP58499 235 aaPredicted RBP13.11□□□□□ -0.31
HLA-A-202ENST00000376806 S100A7AQ86SG5 101 aa13.11□□□□□ -0.31
HLA-A-202ENST00000376806 CHRDL1Q9BU40 450 aa13.11□□□□□ -0.31
HLA-A-202ENST00000376806 TRAV41A0A0B4J266 112 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 PPP5D1E7EU14 171 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 GCGP01275 180 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 TYMSP04818 313 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 ADMP35318 185 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 ERVFC1-1P60608 527 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 LOXL1Q08397 574 aaPredicted RBP13.1□□□□□ -0.31
HLA-A-202ENST00000376806 FOXL1Q12952 345 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 DEFB113Q30KQ7 82 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 BCL6BQ8N143 479 aaPredicted RBP13.1□□□□□ -0.31
HLA-A-202ENST00000376806 TRAV34A0A0B4J273 112 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 ZNF98A6NK75 572 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 J3QLI3 93 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 AP4M1O00189 453 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 UBE2CO00762 179 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 PHOX2AO14813 284 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 MRPS12O15235 138 aaKnown RBP13.1□□□□□ -0.31
HLA-A-202ENST00000376806 IGLC2P0DOY2 106 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 GPR183P32249 361 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 TMEM183BQ1AE95 376 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 LRRC75A-AS1Q8N1F1 130 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 MAPK1IP1LQ8NDC0 245 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 OR4F17Q8NGA8 305 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 ATG101Q9BSB4 218 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 OTORQ9NRC9 128 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 RPH3ALQ9UNE2 315 aa13.1□□□□□ -0.31
HLA-A-202ENST00000376806 RNF223E7ERA6 249 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 SLC17A3O00476 420 aa13.09□□□□□ -0.31
HLA-A-202ENST00000376806 ISLRO14498 428 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms