RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 LINC00052Q96N35 136 aa15.18■□□□□ 0.02
VSX1-201ENST00000376707 FRAS1Q86XX4 4008 aa15.18■□□□□ 0.02
VSX1-201ENST00000376707 WRBO00258 174 aa15.17■□□□□ 0.02
VSX1-201ENST00000376707 BTCP35070 178 aa15.17■□□□□ 0.02
VSX1-201ENST00000376707 ID1P41134 155 aa15.17■□□□□ 0.02
VSX1-201ENST00000376707 ID3Q02535 119 aa15.17■□□□□ 0.02
VSX1-201ENST00000376707 OR2F1Q13607 317 aa15.17■□□□□ 0.02
VSX1-201ENST00000376707 PPP1R14BQ96C90 147 aa15.17■□□□□ 0.02
VSX1-201ENST00000376707 C7orf50Q9BRJ6 194 aaKnown RBP15.17■□□□□ 0.02
VSX1-201ENST00000376707 CELA1Q9UNI1 258 aa15.17■□□□□ 0.02
VSX1-201ENST00000376707 FLVCR2Q9UPI3 526 aa15.17■□□□□ 0.02
VSX1-201ENST00000376707 IGHV4-4A0A075B6R2 117 aa15.16■□□□□ 0.02
VSX1-201ENST00000376707 ADAP1O75689 374 aa15.16■□□□□ 0.02
VSX1-201ENST00000376707 IGKV3-20P01619 116 aa15.16■□□□□ 0.02
VSX1-201ENST00000376707 OR4E1P0C645 316 aa15.16■□□□□ 0.02
VSX1-201ENST00000376707 COQ8AQ8NI60 647 aa15.16■□□□□ 0.02
VSX1-201ENST00000376707 WDR12Q9GZL7 423 aaKnown RBP15.16■□□□□ 0.02
VSX1-201ENST00000376707 CENPXA8MT69 81 aa15.15■□□□□ 0.02
VSX1-201ENST00000376707 CFDP00746 253 aaPredicted RBP15.15■□□□□ 0.02
VSX1-201ENST00000376707 PSMB3P49720 205 aa15.15■□□□□ 0.02
VSX1-201ENST00000376707 GDF5OSQ5U4N7 250 aa15.15■□□□□ 0.02
VSX1-201ENST00000376707 ZNF767PQ75MW2 155 aa15.15■□□□□ 0.02
VSX1-201ENST00000376707 RNF126Q9BV68 326 aa15.15■□□□□ 0.02
VSX1-201ENST00000376707 DEFB131BA0A096LNP1 70 aa15.14■□□□□ 0.01
VSX1-201ENST00000376707 IL7P13232 177 aa15.14■□□□□ 0.01
VSX1-201ENST00000376707 DEFB1P60022 68 aa15.14■□□□□ 0.01
VSX1-201ENST00000376707 C12orf74Q32Q52 190 aa15.14■□□□□ 0.01
VSX1-201ENST00000376707 SPANXN5Q5MJ07 72 aa15.14■□□□□ 0.01
VSX1-201ENST00000376707 FOXI2Q6ZQN5 318 aa15.14■□□□□ 0.01
VSX1-201ENST00000376707 OR8I2Q8N0Y5 310 aa15.14■□□□□ 0.01
VSX1-201ENST00000376707 SAV1Q9H4B6 383 aaPredicted RBP15.14■□□□□ 0.01
VSX1-201ENST00000376707 STRAPQ9Y3F4 350 aaKnown RBP15.14■□□□□ 0.01
VSX1-201ENST00000376707 LINC00854A0A1B0GVQ3 168 aa15.13■□□□□ 0.01
VSX1-201ENST00000376707 ANXA7P20073 488 aaKnown RBP15.13■□□□□ 0.01
VSX1-201ENST00000376707 FXYD7P58549 80 aa15.13■□□□□ 0.01
VSX1-201ENST00000376707 CNPY1Q3B7I2 92 aa15.13■□□□□ 0.01
VSX1-201ENST00000376707 OR4D5Q8NGN0 318 aa15.13■□□□□ 0.01
VSX1-201ENST00000376707 NDUFA13Q9P0J0 144 aa15.13■□□□□ 0.01
VSX1-201ENST00000376707 SLC45A2Q9UMX9 530 aa15.13■□□□□ 0.01
VSX1-201ENST00000376707 IGHV3OR16-12A0A075B7B8 117 aa15.12■□□□□ 0.01
VSX1-201ENST00000376707 H3BP45 60 aa15.12■□□□□ 0.01
VSX1-201ENST00000376707 SOCS3O14543 225 aa15.12■□□□□ 0.01
VSX1-201ENST00000376707 IFNA21P01568 189 aa15.12■□□□□ 0.01
VSX1-201ENST00000376707 POLR2GP62487 172 aaKnown RBP eCLIP15.12■□□□□ 0.01
VSX1-201ENST00000376707 ZNF705AQ6ZN79 300 aaPredicted RBP15.12■□□□□ 0.01
VSX1-201ENST00000376707 OR4B1Q8NGF8 309 aa15.12■□□□□ 0.01
VSX1-201ENST00000376707 NEU1Q99519 415 aa15.12■□□□□ 0.01
VSX1-201ENST00000376707 ZNF705FA8MVS1 300 aaPredicted RBP15.11■□□□□ 0.01
VSX1-201ENST00000376707 ISLRO14498 428 aa15.11■□□□□ 0.01
VSX1-201ENST00000376707 AMBPP02760 352 aa15.11■□□□□ 0.01
VSX1-201ENST00000376707 ZNF705DP0CH99 300 aaPredicted RBP15.11■□□□□ 0.01
VSX1-201ENST00000376707 ZNF705BP0CI00 300 aaPredicted RBP15.11■□□□□ 0.01
VSX1-201ENST00000376707 C4orf46Q504U0 113 aa15.11■□□□□ 0.01
VSX1-201ENST00000376707 SAMD13Q5VXD3 122 aa15.11■□□□□ 0.01
VSX1-201ENST00000376707 SPATA31B1PQ5VZV4 182 aa15.11■□□□□ 0.01
VSX1-201ENST00000376707 EBLN2Q6P2I7 272 aa15.11■□□□□ 0.01
VSX1-201ENST00000376707 ACOT7LQ6ZUV0 252 aa15.11■□□□□ 0.01
VSX1-201ENST00000376707 TMEM189A5PLL7 270 aa15.1■□□□□ 0.01
VSX1-201ENST00000376707 SMIM9A6NGZ8 99 aa15.1■□□□□ 0.01
VSX1-201ENST00000376707 EMP1P54849 157 aa15.1■□□□□ 0.01
VSX1-201ENST00000376707 GSG1LQ6UXU4 331 aa15.1■□□□□ 0.01
VSX1-201ENST00000376707 TMEM144Q7Z5S9 345 aa15.1■□□□□ 0.01
VSX1-201ENST00000376707 SMIM8Q96KF7 97 aa15.1■□□□□ 0.01
VSX1-201ENST00000376707 CLUHP3Q96NS8 147 aa15.1■□□□□ 0.01
VSX1-201ENST00000376707 PMS2P5A8MQ11 134 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 PLA2G10O15496 165 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 SPART-AS1P0CW21 52 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 GALR1P47211 349 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 MEOX2P50222 304 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 AKR1C1Q04828 323 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 TMEM182Q6ZP80 229 aaPredicted RBP15.09■□□□□ 0.01
VSX1-201ENST00000376707 ZNF709Q8N972 641 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 BPIFCQ8NFQ6 507 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 MITD1Q8WV92 249 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 C16orf92Q96LL3 132 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 SLC25A22Q9H936 323 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 PSENENQ9NZ42 101 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 RFNGQ9Y644 331 aa15.09■□□□□ 0.01
VSX1-201ENST00000376707 DNAH10Q8IVF4 4471 aa15.08■□□□□ 0.01
VSX1-201ENST00000376707 VPS13DQ5THJ4 4388 aa15.08■□□□□ 0
VSX1-201ENST00000376707 SSSCA1O60232 199 aa15.08■□□□□ 0
VSX1-201ENST00000376707 PAX9P55771 341 aa15.08■□□□□ 0
VSX1-201ENST00000376707 PSG9Q00887 426 aa15.08■□□□□ 0
VSX1-201ENST00000376707 FAM78BQ5VT40 261 aa15.08■□□□□ 0
VSX1-201ENST00000376707 NDUFAF3Q9BU61 184 aa15.08■□□□□ 0
VSX1-201ENST00000376707 SLC35B3Q9H1N7 401 aa15.08■□□□□ 0
VSX1-201ENST00000376707 RPRMQ9NS64 109 aa15.08■□□□□ 0
VSX1-201ENST00000376707 ZNF98A6NK75 572 aa15.07■□□□□ 0
VSX1-201ENST00000376707 F6UB75 175 aa15.07■□□□□ 0
VSX1-201ENST00000376707 ORM2P19652 201 aa15.07■□□□□ 0
VSX1-201ENST00000376707 GATA2P23769 480 aaPredicted RBP15.07■□□□□ 0
VSX1-201ENST00000376707 IAH1Q2TAA2 248 aaPredicted RBP15.07■□□□□ 0
VSX1-201ENST00000376707 TMEM14EPQ6UXP3 125 aa15.07■□□□□ 0
VSX1-201ENST00000376707 RSG1Q9BU20 258 aa15.07■□□□□ 0
VSX1-201ENST00000376707 SCRT1Q9BWW7 348 aa15.07■□□□□ 0
VSX1-201ENST00000376707 C20orf85Q9H1P6 137 aa15.07■□□□□ 0
VSX1-201ENST00000376707 SLC25A32Q9H2D1 315 aa15.07■□□□□ 0
VSX1-201ENST00000376707 GOLT1BQ9Y3E0 138 aa15.07■□□□□ 0
VSX1-201ENST00000376707 A0A0J9YX75 114 aa15.06■□□□□ 0
VSX1-201ENST00000376707 LYRM1O43325 122 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms