RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 SELENOKQ9Y6D0 94 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 TECTAO75443 2155 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 PLCE1Q9P212 2302 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 IGHV3-21A0A0B4J1V1 117 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 PPIAL4DF5H284 164 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 IGLC1P0CG04 106 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 CCL3L1P16619 93 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 HCP5Q6MZN7 132 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 UBALD2Q8IYN6 164 aa13.22□□□□□ -0.29
TRIM39-201ENST00000376656 A0A1W2PPI3 338 aa13.21□□□□□ -0.29
TRIM39-201ENST00000376656 OVOL3O00110 214 aa13.21□□□□□ -0.29
TRIM39-201ENST00000376656 TNFAIP6P98066 277 aaPredicted RBP13.21□□□□□ -0.29
TRIM39-201ENST00000376656 TRIOBPQ9H2D6 2365 aa13.21□□□□□ -0.29
TRIM39-201ENST00000376656 hADV38S2A0JD32 116 aa13.21□□□□□ -0.29
TRIM39-201ENST00000376656 NPIPB6E9PJ23 425 aa13.21□□□□□ -0.29
TRIM39-201ENST00000376656 HAX1O00165 279 aa13.21□□□□□ -0.29
TRIM39-201ENST00000376656 SAP30O75446 220 aa13.21□□□□□ -0.29
TRIM39-201ENST00000376656 GLRXP35754 106 aa13.21□□□□□ -0.29
TRIM39-201ENST00000376656 GATA4P43694 442 aa13.21□□□□□ -0.29
TRIM39-201ENST00000376656 SMG1Q96Q15 3661 aaKnown RBP13.21□□□□□ -0.3
TRIM39-201ENST00000376656 KLK10O43240 276 aa13.21□□□□□ -0.3
TRIM39-201ENST00000376656 UQCRFS1P47985 274 aa13.21□□□□□ -0.3
TRIM39-201ENST00000376656 Q86TA4 180 aa13.21□□□□□ -0.3
TRIM39-201ENST00000376656 BPIFA4PQ86YQ2 179 aa13.21□□□□□ -0.3
TRIM39-201ENST00000376656 K7ERU9 68 aa13.2□□□□□ -0.3
TRIM39-201ENST00000376656 IGLV2-23P01705 113 aa13.2□□□□□ -0.3
TRIM39-201ENST00000376656 IGHV1-46P01743 117 aa13.2□□□□□ -0.3
TRIM39-201ENST00000376656 ZNF747Q9BV97 191 aa13.2□□□□□ -0.3
TRIM39-201ENST00000376656 FAM231BA6NCW3 169 aa13.2□□□□□ -0.3
TRIM39-201ENST00000376656 APELAP0DMC3 54 aa13.2□□□□□ -0.3
TRIM39-201ENST00000376656 PRB4P10163 310 aaPredicted RBP13.2□□□□□ -0.3
TRIM39-201ENST00000376656 OR4C13Q8NGP0 309 aa13.2□□□□□ -0.3
TRIM39-201ENST00000376656 MEGF9Q9H1U4 602 aa13.2□□□□□ -0.3
TRIM39-201ENST00000376656 TMEM97Q5BJF2 176 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 DHRS13Q6UX07 377 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 PRNTQ86SH4 94 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 RITA1Q96K30 269 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 ASCL2Q99929 193 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 ARRDC1-AS1Q9H2J1 176 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 LINC00312Q9Y6C7 94 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 IGLV3-9A0A075B6K5 115 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 SLC25A17O43808 307 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 ARMS2P0C7Q2 107 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 TMEM30BQ3MIR4 351 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 FAM169BQ8N8A8 192 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 AP5S1Q9NUS5 200 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 NCOR1O75376 2440 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 WT1P19544 449 aaPredicted RBP13.19□□□□□ -0.3
TRIM39-201ENST00000376656 CCL11P51671 97 aa13.19□□□□□ -0.3
TRIM39-201ENST00000376656 GAGE10A6NGK3 116 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 C1orf210Q8IVY1 113 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 VSTM2AQ8TAG5 236 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 ABCA1O95477 2261 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 ZNF785A8K8V0 405 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 FAM106CPP0CH98 169 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 FAM106AQ4KMX7 169 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 GOLT1AQ6ZVE7 132 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 EXOC3-AS1Q8N2X6 119 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 OR4A5Q8NH83 315 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 IGLV2-11P01706 119 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 CRYGCP07315 174 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 RIPPLY3P57055 190 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 TRGV9Q99603 122 aa13.18□□□□□ -0.3
TRIM39-201ENST00000376656 TCTAP57738 103 aa13.17□□□□□ -0.3
TRIM39-201ENST00000376656 MRGPRG-AS1Q2M3A8 158 aa13.17□□□□□ -0.3
TRIM39-201ENST00000376656 FDCSPQ8NFU4 85 aa13.17□□□□□ -0.3
TRIM39-201ENST00000376656 JMJD8Q96S16 334 aa13.17□□□□□ -0.3
TRIM39-201ENST00000376656 NAA38Q9BRA0 125 aaKnown RBP13.17□□□□□ -0.3
TRIM39-201ENST00000376656 A0A1B0GUT8 65 aa13.17□□□□□ -0.3
TRIM39-201ENST00000376656 FGF6P10767 208 aa13.17□□□□□ -0.3
TRIM39-201ENST00000376656 SEM1Q6ZVN7 128 aa13.17□□□□□ -0.3
TRIM39-201ENST00000376656 OR10X1Q8NGY0 326 aa13.17□□□□□ -0.3
TRIM39-201ENST00000376656 SRSF12Q8WXF0 261 aaKnown RBP13.17□□□□□ -0.3
TRIM39-201ENST00000376656 FCN3O75636 299 aa13.16□□□□□ -0.3
TRIM39-201ENST00000376656 ZNF883P0CG24 379 aa13.16□□□□□ -0.3
TRIM39-201ENST00000376656 SEC11AP67812 179 aa13.16□□□□□ -0.3
TRIM39-201ENST00000376656 UFSP1Q6NVU6 142 aa13.16□□□□□ -0.3
TRIM39-201ENST00000376656 CFAP47Q6ZTR5 3102 aa13.16□□□□□ -0.3
TRIM39-201ENST00000376656 LOXL1Q08397 574 aaPredicted RBP13.16□□□□□ -0.3
TRIM39-201ENST00000376656 FA2HQ7L5A8 372 aa13.16□□□□□ -0.3
TRIM39-201ENST00000376656 PIP4P2Q8N4L2 257 aa13.16□□□□□ -0.3
TRIM39-201ENST00000376656 SRSF6Q13247 344 aaKnown RBP13.16□□□□□ -0.3
TRIM39-201ENST00000376656 PRSS3P2Q8NHM4 247 aa13.16□□□□□ -0.3
TRIM39-201ENST00000376656 RABAC1Q9UI14 185 aa13.16□□□□□ -0.3
TRIM39-201ENST00000376656 FER1L6-AS1Q8NA97 138 aa13.15□□□□□ -0.3
TRIM39-201ENST00000376656 OR8A1Q8NGG7 326 aa13.15□□□□□ -0.3
TRIM39-201ENST00000376656 C8orf46Q8TAG6 207 aa13.15□□□□□ -0.3
TRIM39-201ENST00000376656 TMEM200BQ69YZ2 307 aa13.15□□□□□ -0.3
TRIM39-201ENST00000376656 ZNF474Q6S9Z5 364 aaPredicted RBP13.15□□□□□ -0.3
TRIM39-201ENST00000376656 TMEM116Q8NCL8 245 aa13.15□□□□□ -0.3
TRIM39-201ENST00000376656 OR10AG1Q8NH19 301 aa13.15□□□□□ -0.3
TRIM39-201ENST00000376656 OTORQ9NRC9 128 aa13.15□□□□□ -0.3
TRIM39-201ENST00000376656 A0A096LNJ9 63 aa13.15□□□□□ -0.31
TRIM39-201ENST00000376656 IGHV3-72A0A0B4J1Y9 119 aa13.15□□□□□ -0.31
TRIM39-201ENST00000376656 NKX2-8O15522 239 aa13.15□□□□□ -0.31
TRIM39-201ENST00000376656 CSN1S1P47710 185 aa13.15□□□□□ -0.31
TRIM39-201ENST00000376656 HILPDAQ9Y5L2 63 aa13.15□□□□□ -0.31
TRIM39-201ENST00000376656 CD59P13987 128 aa13.14□□□□□ -0.31
TRIM39-201ENST00000376656 IFI27P40305 119 aaPredicted RBP13.14□□□□□ -0.31
TRIM39-201ENST00000376656 CCL8P80075 99 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms