RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 SMIM13P0DJ93 91 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 IGFL3Q6UXB1 125 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 OR4X2Q8NGF9 303 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 LAMTOR2Q9Y2Q5 125 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 HBDP02042 147 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 FOXC2Q99958 501 aa9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 SRSF8Q9BRL6 282 aaKnown RBP9.69□□□□□ -0.86
DEPDC1-201ENST00000370966 BUB1B-PAK6H3BSN5 160 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 CA1P00915 261 aaPredicted RBP9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 CFHR2P36980 270 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 TMEM170BQ5T4T1 132 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 VMO1Q7Z5L0 202 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 PRSS22Q9GZN4 317 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 TNFRSF18Q9Y5U5 241 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 DOCK11Q5JSL3 2073 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 LINC00205P59089 165 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 PAX8Q06710 450 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 LIME1Q9H400 295 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 MALRD1Q5VYJ5 2156 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 HAX1O00165 279 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 LYPD1Q8N2G4 141 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 CRXO43186 299 aaPredicted RBP9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 TMEM50AO95807 157 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 DTX1Q86Y01 620 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 RNF138Q8WVD3 245 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 MOB4Q9Y3A3 225 aa9.68□□□□□ -0.86
DEPDC1-201ENST00000370966 NPFFO15130 113 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 CACNG7P62955 275 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 DUSP14O95147 198 aaKnown RBP9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 IGKV1-16P04430 117 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 TMEM155Q4W5P6 130 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 PLA2G2CQ5R387 149 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 GFI1BQ5VTD9 330 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 SCRT1Q9BWW7 348 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 ZNF256Q9Y2P7 627 aaPredicted RBP9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 OVOL1O14753 267 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 PAX9P55771 341 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 C15orf32Q32M92 178 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 Q8NFD4 153 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 Q8TCH9 128 aa9.67□□□□□ -0.86
DEPDC1-201ENST00000370966 TRAV41A0A0B4J266 112 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 H7C2G1 150 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 DSCR9P59020 149 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 NIT1Q86X76 327 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 PEMTQ9UBM1 199 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 C9JQL5 133 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 RNASE4P34096 147 aaKnown RBP9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 LINC01559Q495D7 138 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 Q6ZR03 302 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 ST6GALNAC3Q8NDV1 305 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 LY6DQ14210 128 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 NUP210Q8TEM1 1887 aaPredicted RBP9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 TRAV40A0A0B4J280 105 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 PRTN3P24158 256 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 ACTL10Q5JWF8 245 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
DEPDC1-201ENST00000370966 LINC01549A6NIU2 74 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 TNFSF13O75888 250 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 IGLV1-44P01699 117 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 LEPP41159 167 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 EXOC3-AS1Q8N2X6 119 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 ST6GALNAC6Q969X2 333 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 NPIPB5A8MRT5 1133 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 CEACAM8P31997 349 aaPredicted RBP9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 SRSF1Q07955 248 aaKnown RBP eCLIP9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 IL15RAQ13261 267 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 LYPD2Q6UXB3 125 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 WDR86Q86TI4 376 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 ZGRF1Q86YA3 2104 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 DUX3Q96PT4 197 aa9.65□□□□□ -0.86
DEPDC1-201ENST00000370966 WIPF3A6NGB9 483 aa9.65□□□□□ -0.87
DEPDC1-201ENST00000370966 E7EQL1 145 aa9.65□□□□□ -0.87
DEPDC1-201ENST00000370966 ORMDL2Q53FV1 153 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 MEIG1Q5JSS6 88 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 SMIM12Q96EX1 92 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 ZNF503-AS2A6NEH8 195 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 ST20Q9HBF5 79 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 YLPM1P49750 1951 aaKnown RBP9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 DENND4CQ5VZ89 1909 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 IGKV1-39P01597 117 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 IGKV1D-39P04432 117 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 CD7P09564 240 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 SUMO2P61956 95 aaKnown RBP9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 SIGLEC15Q6ZMC9 328 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 BEND2Q8NDZ0 799 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 IFI27L1Q96BM0 104 aa9.64□□□□□ -0.87
DEPDC1-201ENST00000370966 SNAI2O43623 268 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 PF4P02776 101 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 ITLN2Q8WWU7 325 aaPredicted RBP9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 KLRD1Q13241 179 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 PYY3Q5JQD4 70 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 MSRB2Q9Y3D2 182 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 IGLV3-9A0A075B6K5 115 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 A0A1W2PPI3 338 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 FAM181BA6NEQ2 426 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 COL8A2P25067 703 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 KLF17Q5JT82 389 aaPredicted RBP9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 C9orf139Q6ZV77 190 aa9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 MRPL27Q9P0M9 148 aaKnown RBP9.63□□□□□ -0.87
DEPDC1-201ENST00000370966 VDAC2P45880 294 aaPredicted RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms