RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 SLC25A21Q9BQT8 299 aaPredicted RBP0.3□□□□□ -2.36
RNU4-1-201ENST00000363925 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.3□□□□□ -2.36
RNU4-1-201ENST00000363925 IDI2-AS1Q9NZ38 188 aa0.3□□□□□ -2.36
RNU4-1-201ENST00000363925 PCTPQ9UKL6 214 aa0.3□□□□□ -2.36
RNU4-1-201ENST00000363925 RTL1A6NKG5 1358 aa0.3□□□□□ -2.36
RNU4-1-201ENST00000363925 NEO1Q92859 1461 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 TRGV10A0A0A0MS01 117 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 NUPR2A6NF83 97 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 NDUFB3O43676 98 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 PRH1P02810 166 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 SRIP30626 198 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 ITGB3BPQ13352 177 aaPredicted RBP0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 PTRHD1Q6GMV3 140 aaKnown RBP0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 STAG3L4Q8TBR4 150 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 TSKUQ8WUA8 353 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 PPP1R14BQ96C90 147 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 YPEL2Q96QA6 119 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 LINC00467Q9BRT7 94 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 WFDC10AQ9H1F0 79 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 UCK1Q9HA47 277 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 KDM6AO15550 1401 aaPredicted RBP0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 TNS3Q68CZ2 1445 aa0.29□□□□□ -2.36
RNU4-1-201ENST00000363925 FAT4Q6V0I7 4981 aa0.28□□□□□ -2.36
RNU4-1-201ENST00000363925 TRAV23DV6A0A075B6W5 121 aa0.28□□□□□ -2.36
RNU4-1-201ENST00000363925 KPNA3O00505 521 aaPredicted RBP0.28□□□□□ -2.36
RNU4-1-201ENST00000363925 ERP29P30040 261 aaKnown RBP0.28□□□□□ -2.36
RNU4-1-201ENST00000363925 SPINK7P58062 85 aa0.28□□□□□ -2.36
RNU4-1-201ENST00000363925 MYL5Q02045 173 aa0.28□□□□□ -2.36
RNU4-1-201ENST00000363925 EDDM3AQ14507 147 aa0.28□□□□□ -2.36
RNU4-1-201ENST00000363925 BCL2L15Q5TBC7 163 aa0.28□□□□□ -2.36
RNU4-1-201ENST00000363925 ARHGEF28Q8N1W1 1705 aaKnown RBP0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 SIP14410 1827 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 PLXNA4Q9HCM2 1894 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 PTPRFP10586 1907 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 FANCMQ8IYD8 2048 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 A8MWV9 139 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 ERC2-IT1O76042 136 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 SERPINB9P50453 376 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 PIGPP57054 158 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 SPA17Q15506 151 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 EXOC3-AS1Q8N2X6 119 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 C12orf45Q8N5I9 185 aaPredicted RBP0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 OR10K1Q8NGX5 313 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 KIFC1Q9BW19 673 aa0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 PARD6GQ9BYG4 376 aaPredicted RBP0.27□□□□□ -2.37
RNU4-1-201ENST00000363925 SPTBP11277 2137 aa0.26□□□□□ -2.37
RNU4-1-201ENST00000363925 RNASE4P34096 147 aaKnown RBP0.26□□□□□ -2.37
RNU4-1-201ENST00000363925 CDK6Q00534 326 aa0.26□□□□□ -2.37
RNU4-1-201ENST00000363925 OR10AC1Q8NH08 325 aa0.26□□□□□ -2.37
RNU4-1-201ENST00000363925 PRRT1Q99946 306 aa0.26□□□□□ -2.37
RNU4-1-201ENST00000363925 ADCY9O60503 1353 aa0.26□□□□□ -2.37
RNU4-1-201ENST00000363925 KIF1BO60333 1816 aa0.26□□□□□ -2.37
RNU4-1-201ENST00000363925 TET1Q8NFU7 2136 aa0.26□□□□□ -2.37
RNU4-1-201ENST00000363925 ZDBF2Q9HCK1 2354 aa0.26□□□□□ -2.37
RNU4-1-201ENST00000363925 MYO5AQ9Y4I1 1855 aaKnown RBP0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 M0R233 179 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 PPYP01298 95 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 HOXA6P31267 233 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 SPINT3P49223 89 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 HIST1H3AP68431 136 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 H3F3AP84243 136 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 C6orf52Q5T4I8 152 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 C22orf39Q6P5X5 142 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 ZNF833PQ6ZTB9 187 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 GNPDA2Q8TDQ7 276 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 BTF3L4Q96K17 158 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 SIGMAR1Q99720 223 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 PLAC8Q9NZF1 115 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 OPTCQ9UBM4 332 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 ZGRF1Q86YA3 2104 aa0.25□□□□□ -2.37
RNU4-1-201ENST00000363925 ARHGEF11O15085 1522 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 PIK3C2GO75747 1445 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 A0A0D9SG42 100 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 NIPSNAP2O75323 286 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 CXCL8P10145 99 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 COX7CP15954 63 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 ZNF137PP52743 207 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 DSCR4P56555 118 aaPredicted RBP0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 RRN3P1Q2M238 152 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 TMEM97Q5BJF2 176 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 EIF5AL1Q6IS14 154 aaKnown RBP0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 RAB37Q96AX2 223 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 MUCL1Q96DR8 90 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 ARL5BQ96KC2 179 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 GGACTQ9BVM4 153 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 PBOV1Q9GZY1 135 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 TMEM126AQ9H061 195 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 TMEM133Q9H2Q1 129 aa0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 PHRF1Q9P1Y6 1649 aaKnown RBP0.24□□□□□ -2.37
RNU4-1-201ENST00000363925 MUC4Q99102 2169 aa0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 E7EUB6 86 aa0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 TCRBP04435 133 aa0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 RANP62826 216 aaKnown RBP0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 CIRBPQ14011 172 aaKnown RBP0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 SPATA45Q537H7 98 aa0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 Q6ZS92 163 aa0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 Q8TAT8 98 aa0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 OR52A1Q9UKL2 312 aa0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 FAM32AQ9Y421 112 aaKnown RBP0.23□□□□□ -2.37
RNU4-1-201ENST00000363925 MDN1Q9NU22 5596 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms