RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 CHODLQ9H9P2 273 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 HILPDAQ9Y5L2 63 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 GAGE10A6NGK3 116 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 VWC2LB2RUY7 222 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 FAM87AP0C7U9 286 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 PRR20EP86478 221 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 PRR20CP86479 221 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 PRR20DP86480 221 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 PRR20BP86481 221 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 PRR20AP86496 221 aa13.02□□□□□ -0.33
IFT140-201ENST00000361339 RALYQ9UKM9 306 aaKnown RBP13.02□□□□□ -0.33
IFT140-201ENST00000361339 PRCDQ00LT1 54 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 C3orf36Q3SXR2 165 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 ASCL5Q7RTU5 278 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 DEFB125Q8N687 156 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.01□□□□□ -0.33
IFT140-201ENST00000361339 TMEM167BQ9NRX6 74 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 MRPL27Q9P0M9 148 aaKnown RBP13.01□□□□□ -0.33
IFT140-201ENST00000361339 LINC00312Q9Y6C7 94 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 TMEM178BH3BS89 294 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 SYS1-DBNDD2H3BUS1 97 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 BLNKQ8WV28 456 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 PGLYRP4Q96LB8 373 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 ZNF714Q96N38 554 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 MRPL36Q9P0J6 103 aaKnown RBP13.01□□□□□ -0.33
IFT140-201ENST00000361339 LY96Q9Y6Y9 160 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 ARHGAP32A7KAX9 2087 aa13.01□□□□□ -0.33
IFT140-201ENST00000361339 C7orf71A4D174 169 aa13□□□□□ -0.33
IFT140-201ENST00000361339 GRNP28799 593 aaKnown RBP13□□□□□ -0.33
IFT140-201ENST00000361339 ZNF430Q9H8G1 570 aaPredicted RBP13□□□□□ -0.33
IFT140-201ENST00000361339 COL12A1Q99715 3063 aa13□□□□□ -0.33
IFT140-201ENST00000361339 HRNRQ86YZ3 2850 aaPredicted RBP13□□□□□ -0.33
IFT140-201ENST00000361339 MED13LQ71F56 2210 aa13□□□□□ -0.33
IFT140-201ENST00000361339 PPIAL4EA0A075B759 164 aa13□□□□□ -0.33
IFT140-201ENST00000361339 FAM231BA6NCW3 169 aa13□□□□□ -0.33
IFT140-201ENST00000361339 CGB1A6NKQ9 187 aa13□□□□□ -0.33
IFT140-201ENST00000361339 PPIAL4FP0DN26 164 aa13□□□□□ -0.33
IFT140-201ENST00000361339 RNASE2P10153 161 aaKnown RBP13□□□□□ -0.33
IFT140-201ENST00000361339 RTL8BQ17RB0 113 aa13□□□□□ -0.33
IFT140-201ENST00000361339 AMMECR1Q9Y4X0 333 aaPredicted RBP13□□□□□ -0.33
IFT140-201ENST00000361339 COL6A6A6NMZ7 2263 aa13□□□□□ -0.33
IFT140-201ENST00000361339 IGHV1-24A0A0C4DH33 117 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 E7EQL1 145 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 TNFRSF1AP19438 455 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 LINC00574Q9H8X3 128 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 PRNDQ9UKY0 176 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 ZNF833PQ6ZTB9 187 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 TEX45Q8NA69 505 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 AP1S3Q96PC3 154 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 WT1-ASQ06250 92 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 POU2AF1Q16633 256 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 COX19Q49B96 90 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 Q5PR19 223 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 NCOR1P1Q9H4R4 102 aa12.99□□□□□ -0.33
IFT140-201ENST00000361339 ANKHD1Q8IWZ3 2542 aaKnown RBP12.98□□□□□ -0.33
IFT140-201ENST00000361339 IGHV3-21A0A0B4J1V1 117 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 C12orf54Q6X4T0 127 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 OR1B1Q8NGR6 318 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 OR10X1Q8NGY0 326 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 ADTRPQ96IZ2 230 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 IGF2BP2-AS1Q96M15 143 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 A0A1W2PRE2 83 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 SHISA9B4DS77 424 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 H3BUT2 72 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 CNTFRP26992 372 aa12.98□□□□□ -0.33
IFT140-201ENST00000361339 RNASE6Q93091 150 aaKnown RBP12.98□□□□□ -0.33
IFT140-201ENST00000361339 FBLL1A6NHQ2 334 aaKnown RBP12.97□□□□□ -0.33
IFT140-201ENST00000361339 LOXP28300 417 aaPredicted RBP12.97□□□□□ -0.33
IFT140-201ENST00000361339 LINC01560Q8TB33 94 aa12.97□□□□□ -0.33
IFT140-201ENST00000361339 ASCL2Q99929 193 aa12.97□□□□□ -0.33
IFT140-201ENST00000361339 SPTBN4Q9H254 2564 aa12.97□□□□□ -0.33
IFT140-201ENST00000361339 GNG7O60262 68 aa12.97□□□□□ -0.33
IFT140-201ENST00000361339 LY6HO94772 140 aa12.97□□□□□ -0.33
IFT140-201ENST00000361339 TMEM191AQ9H0A3 160 aa12.97□□□□□ -0.33
IFT140-201ENST00000361339 ST20Q9HBF5 79 aa12.97□□□□□ -0.33
IFT140-201ENST00000361339 DYNLRB1Q9NP97 96 aa12.97□□□□□ -0.33
IFT140-201ENST00000361339 SLC25A17O43808 307 aa12.96□□□□□ -0.33
IFT140-201ENST00000361339 GPR183P32249 361 aa12.96□□□□□ -0.33
IFT140-201ENST00000361339 TM4SF20Q53R12 229 aa12.96□□□□□ -0.33
IFT140-201ENST00000361339 FER1L6-AS1Q8NA97 138 aa12.96□□□□□ -0.33
IFT140-201ENST00000361339 SCNM1Q9BWG6 230 aa12.96□□□□□ -0.33
IFT140-201ENST00000361339 FXYD7P58549 80 aa12.96□□□□□ -0.33
IFT140-201ENST00000361339 COMMD5Q9GZQ3 224 aa12.96□□□□□ -0.33
IFT140-201ENST00000361339 ENSAO43768 121 aaKnown RBP12.96□□□□□ -0.34
IFT140-201ENST00000361339 ARF6P62330 175 aa12.96□□□□□ -0.34
IFT140-201ENST00000361339 FAM120AOSQ5T036 256 aa12.96□□□□□ -0.34
IFT140-201ENST00000361339 OR1N2Q8NGR9 330 aa12.96□□□□□ -0.34
IFT140-201ENST00000361339 FLYWCH2Q96CP2 140 aaKnown RBP12.96□□□□□ -0.34
IFT140-201ENST00000361339 NDUFA4L2Q9NRX3 87 aa12.96□□□□□ -0.34
IFT140-201ENST00000361339 C8orf88P0DMB2 117 aa12.95□□□□□ -0.34
IFT140-201ENST00000361339 TAS2R45P59539 299 aa12.95□□□□□ -0.34
IFT140-201ENST00000361339 CDSNQ15517 529 aa12.95□□□□□ -0.34
IFT140-201ENST00000361339 HCP5Q6MZN7 132 aa12.95□□□□□ -0.34
IFT140-201ENST00000361339 OR5AN1Q8NGI8 311 aa12.95□□□□□ -0.34
IFT140-201ENST00000361339 JKAMPQ9P055 326 aa12.95□□□□□ -0.34
IFT140-201ENST00000361339 PEF1Q9UBV8 284 aaKnown RBP12.95□□□□□ -0.34
IFT140-201ENST00000361339 CHD8Q9HCK8 2581 aa12.95□□□□□ -0.34
IFT140-201ENST00000361339 NDUFB3O43676 98 aa12.95□□□□□ -0.34
IFT140-201ENST00000361339 HTR1DP28221 377 aa12.95□□□□□ -0.34
IFT140-201ENST00000361339 RAB9BQ9NP90 201 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms