RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 TCL1AP56279 114 aa17.94■□□□□ 0.46
LDB1-201ENST00000361198 SLC35B1P78383 322 aa17.94■□□□□ 0.46
LDB1-201ENST00000361198 ZNF329Q86UD4 541 aa17.94■□□□□ 0.46
LDB1-201ENST00000361198 MBD6Q96DN6 1003 aa17.94■□□□□ 0.46
LDB1-201ENST00000361198 LINC00479Q96M42 142 aa17.94■□□□□ 0.46
LDB1-201ENST00000361198 NUTF2P61970 127 aaKnown RBP17.93■□□□□ 0.46
LDB1-201ENST00000361198 OR1B1Q8NGR6 318 aa17.93■□□□□ 0.46
LDB1-201ENST00000361198 FXYD5Q96DB9 178 aa17.93■□□□□ 0.46
LDB1-201ENST00000361198 WNT10AQ9GZT5 417 aa17.93■□□□□ 0.46
LDB1-201ENST00000361198 BMPR1BO00238 502 aa17.93■□□□□ 0.46
LDB1-201ENST00000361198 EFNA4P52798 201 aa17.93■□□□□ 0.46
LDB1-201ENST00000361198 HES1Q14469 280 aa17.93■□□□□ 0.46
LDB1-201ENST00000361198 NPBQ8NG41 125 aa17.93■□□□□ 0.46
LDB1-201ENST00000361198 NDUFA3O95167 84 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 RAB4AP20338 218 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 MYCNOSP40205 109 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 TDRG1Q3Y452 100 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 RASL11AQ6T310 242 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 DYNAPQ8N1N2 210 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 SIGLECL1Q8N7X8 197 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 WIPF2Q8TF74 440 aaPredicted RBP17.92■□□□□ 0.46
LDB1-201ENST00000361198 SERTAD4Q9NUC0 356 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 M0R143 59 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 PEX7O00628 323 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 FAM168AQ92567 244 aa17.92■□□□□ 0.46
LDB1-201ENST00000361198 FAM103A1Q9BTL3 118 aaKnown RBP17.92■□□□□ 0.46
LDB1-201ENST00000361198 I3L2K1 104 aa17.91■□□□□ 0.46
LDB1-201ENST00000361198 KIAA1644Q3SXP7 199 aa17.91■□□□□ 0.46
LDB1-201ENST00000361198 MRPL54Q6P161 138 aaKnown RBP17.91■□□□□ 0.46
LDB1-201ENST00000361198 KIR3DL3Q8N743 410 aa17.91■□□□□ 0.46
LDB1-201ENST00000361198 HOXB4P17483 251 aaPredicted RBP17.91■□□□□ 0.46
LDB1-201ENST00000361198 NHLRC2Q8NBF2 726 aa17.91■□□□□ 0.46
LDB1-201ENST00000361198 SRSF8Q9BRL6 282 aaKnown RBP17.91■□□□□ 0.46
LDB1-201ENST00000361198 MRPL52Q86TS9 123 aaKnown RBP17.9■□□□□ 0.46
LDB1-201ENST00000361198 STXBP6Q8NFX7 210 aa17.9■□□□□ 0.46
LDB1-201ENST00000361198 COL12A1Q99715 3063 aa17.9■□□□□ 0.46
LDB1-201ENST00000361198 CA1P00915 261 aaPredicted RBP17.89■□□□□ 0.46
LDB1-201ENST00000361198 PERPQ96FX8 193 aa17.89■□□□□ 0.46
LDB1-201ENST00000361198 KCNS1Q96KK3 526 aa17.89■□□□□ 0.46
LDB1-201ENST00000361198 FBXL7Q9UJT9 491 aa17.89■□□□□ 0.46
LDB1-201ENST00000361198 A0A1W2PS18 150 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 ZNF253O75346 499 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 IGLC1P0CG04 106 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 SRIP30626 198 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 TMEM183BQ1AE95 376 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 C5orf64Q2M2E5 130 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 VN1R17PQ8TDU5 208 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 RCHY1Q96PM5 261 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 ZNF586Q9NXT0 402 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 RNF114Q9Y508 228 aa17.89■□□□□ 0.45
LDB1-201ENST00000361198 Q8N976 141 aa17.88■□□□□ 0.45
LDB1-201ENST00000361198 MIEN1Q9BRT3 115 aa17.88■□□□□ 0.45
LDB1-201ENST00000361198 SIRPDQ9H106 197 aa17.88■□□□□ 0.45
LDB1-201ENST00000361198 TBL2Q9Y4P3 447 aaKnown RBP17.88■□□□□ 0.45
LDB1-201ENST00000361198 HYPMO75409 117 aa17.88■□□□□ 0.45
LDB1-201ENST00000361198 APCSP02743 223 aa17.88■□□□□ 0.45
LDB1-201ENST00000361198 GRAMD2BQ96HH9 432 aa17.88■□□□□ 0.45
LDB1-201ENST00000361198 NEU1Q99519 415 aa17.88■□□□□ 0.45
LDB1-201ENST00000361198 BPESC1Q9GZL8 116 aa17.88■□□□□ 0.45
LDB1-201ENST00000361198 C7orf69Q9H7B7 122 aa17.88■□□□□ 0.45
LDB1-201ENST00000361198 ZNF331Q9NQX6 463 aaPredicted RBP17.88■□□□□ 0.45
LDB1-201ENST00000361198 CCDC144NLQ6NUI1 221 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 NUDT10Q8NFP7 164 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 NUDT11Q96G61 164 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 NRN1Q9NPD7 142 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 VPS13CQ709C8 3753 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 TRAV34A0A0B4J273 112 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 K7EIM0 57 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 PSG1P11464 419 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 PLP1P60201 277 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 SMIM12Q96EX1 92 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 CHRDL1Q9BU40 450 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 VAMP8Q9BV40 100 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 KLF12Q9Y4X4 402 aa17.87■□□□□ 0.45
LDB1-201ENST00000361198 AMTP48728 403 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 IGSF10Q6WRI0 2623 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 IGHV2-70DA0A0C4DH43 119 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 TCAPO15273 167 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 ZNF324O75467 553 aaPredicted RBP17.86■□□□□ 0.45
LDB1-201ENST00000361198 SLAQ13239 276 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 MINOS1Q5TGZ0 78 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 LEMD1Q68G75 181 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 NUP35Q8NFH5 326 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 EPDR1Q9UM22 224 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 MINOS1-NBL1R4GNA1 71 aa17.86■□□□□ 0.45
LDB1-201ENST00000361198 ACACBO00763 2458 aa17.85■□□□□ 0.45
LDB1-201ENST00000361198 LMO4P61968 165 aa17.85■□□□□ 0.45
LDB1-201ENST00000361198 KLF17Q5JT82 389 aaPredicted RBP17.85■□□□□ 0.45
LDB1-201ENST00000361198 BLNKQ8WV28 456 aa17.85■□□□□ 0.45
LDB1-201ENST00000361198 MRPL27Q9P0M9 148 aaKnown RBP17.85■□□□□ 0.45
LDB1-201ENST00000361198 PAM16Q9Y3D7 125 aa17.85■□□□□ 0.45
LDB1-201ENST00000361198 NCBP2LA6PVI3 153 aaKnown RBP17.84■□□□□ 0.45
LDB1-201ENST00000361198 M0QZK8 103 aa17.84■□□□□ 0.45
LDB1-201ENST00000361198 RASL11BQ9BPW5 248 aa17.84■□□□□ 0.45
LDB1-201ENST00000361198 OOSP1A8MZH6 123 aa17.84■□□□□ 0.45
LDB1-201ENST00000361198 TOX4O94842 621 aa17.84■□□□□ 0.45
LDB1-201ENST00000361198 IGKV1-17P01599 117 aa17.84■□□□□ 0.45
LDB1-201ENST00000361198 LYZP61626 148 aa17.84■□□□□ 0.45
LDB1-201ENST00000361198 ZNF705AQ6ZN79 300 aaPredicted RBP17.84■□□□□ 0.45
LDB1-201ENST00000361198 Q8N6K4 173 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms