RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CENPVL3A0A0U1RRI6 287 aa14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 WI2-2373I1.2A0A1W2PRP0 233 aa14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 H3BRN7 92 aa14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 MGST1P10620 155 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 UBE2G1P62253 170 aa14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 COA6Q5JTJ3 125 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 IBA57Q5T440 356 aaKnown RBP14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 BAGE2Q86Y30 109 aa14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 ZNF491Q8N8L2 437 aa14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 RNF125Q96EQ8 232 aa14.4□□□□□ -0.1
PDLIM7-203ENST00000359895 EGR2P11161 476 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 SRSF1Q07955 248 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 FAM231DQ6ZW35 169 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 TMEM183AQ8IXX5 376 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 TXN2Q99757 166 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 ATG101Q9BSB4 218 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 CHRDL1Q9BU40 450 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 Q9H3A6 140 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 OTORQ9NRC9 128 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 C21orf62Q9NYP8 219 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 KLF12Q9Y4X4 402 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 IFITM10A6NMD0 228 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 ATP5J2P56134 94 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 COX19Q49B96 90 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 Q56UQ5 140 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 LEMD1Q68G75 181 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 BPIFA4PQ86YQ2 179 aa14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 FAM110DQ8TAY7 271 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-203ENST00000359895 COL12A1Q99715 3063 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 IGHV4-61A0A0C4DH41 118 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 IL4P05112 153 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 RNF224P0DH78 156 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 FCGR2BP31994 310 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 KLK9Q2XQG4 91 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 PIP4P2Q8N4L2 257 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 VN1R17PQ8TDU5 208 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 FMC1Q96HJ9 113 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 LINC00479Q96M42 142 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 RNASE7Q9H1E1 156 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 KLK9Q9UKQ9 250 aa14.38□□□□□ -0.11
PDLIM7-203ENST00000359895 TRBV9A0A0B4J1U6 114 aa14.37□□□□□ -0.11
PDLIM7-203ENST00000359895 IGHV1-69DA0A0B4J2H0 117 aa14.37□□□□□ -0.11
PDLIM7-203ENST00000359895 XKRY2A2RUG3 117 aa14.37□□□□□ -0.11
PDLIM7-203ENST00000359895 IGHV1-69P01742 117 aa14.37□□□□□ -0.11
PDLIM7-203ENST00000359895 GNG5P63218 68 aa14.37□□□□□ -0.11
PDLIM7-203ENST00000359895 OR4F17Q8NGA8 305 aa14.37□□□□□ -0.11
PDLIM7-203ENST00000359895 GPR61Q9BZJ8 451 aa14.37□□□□□ -0.11
PDLIM7-203ENST00000359895 NDUFB8O95169 186 aa14.36□□□□□ -0.11
PDLIM7-203ENST00000359895 GFI1BQ5VTD9 330 aa14.36□□□□□ -0.11
PDLIM7-203ENST00000359895 ZNF586Q9NXT0 402 aa14.36□□□□□ -0.11
PDLIM7-203ENST00000359895 LRRK2Q5S007 2527 aa14.36□□□□□ -0.11
PDLIM7-203ENST00000359895 TRAV34A0A0B4J273 112 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 ZNF705GA8MUZ8 300 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 F8W735 103 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 OR2J3O76001 311 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 TCRAP04437 139 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 SNRPCP09234 159 aaKnown RBP14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 S100A7P31151 101 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 DSCR9P59020 149 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 UNQ5815/PRO19632Q6UWF5 114 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 OR8I2Q8N0Y5 310 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 LYPD1Q8N2G4 141 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 GPR82Q96P67 336 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 HSPB9Q9BQS6 159 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 FBXL7Q9UJT9 491 aa14.35□□□□□ -0.11
PDLIM7-203ENST00000359895 SMIM27A0A1W2PRY6 76 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 GATCO43716 136 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 S100A12P80511 92 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 CMTM2Q8TAZ6 248 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 TMUB1Q9BVT8 246 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 SERTAD4Q9NUC0 356 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 S4R3C0 116 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 WDR73Q6P4I2 378 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 NHLRC2Q8NBF2 726 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 GNB1LQ9BYB4 327 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 RPH3ALQ9UNE2 315 aa14.34□□□□□ -0.11
PDLIM7-203ENST00000359895 TRBV19A0A075B6N1 114 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 PCP4L1A6NKN8 68 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 ATP6V0E1O15342 81 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 MT-ND6P03923 174 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 IGLC2P0DOY2 106 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 PDZD11Q5EBL8 140 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 C5orf56Q8N8D9 126 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 OR10D4PQ8NGN7 298 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 GRAMD2BQ96HH9 432 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 MEGF9Q9H1U4 602 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 ASH1LQ9NR48 2969 aaKnown RBP14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 MOB4Q9Y3A3 225 aa14.33□□□□□ -0.12
PDLIM7-203ENST00000359895 DOPEY1Q5JWR5 2465 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 IGHV4-30-2A0A087WSY4 118 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 TRBV6-1A0A0K0K1D8 114 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 H3BTX0 84 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 LTAP01374 205 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 FABP4P15090 132 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 PAX1P15863 534 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 USF2Q15853 346 aaPredicted RBP14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 ECSCRQ19T08 205 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 MBD6Q96DN6 1003 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 C7orf69Q9H7B7 122 aa14.32□□□□□ -0.12
PDLIM7-203ENST00000359895 NIT2Q9NQR4 276 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms