RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 KRTAP10-11P60412 298 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 RPL23P62829 140 aaKnown RBP6.44□□□□□ -1.38
CD44-205ENST00000352818 PRB3Q04118 309 aaPredicted RBP6.44□□□□□ -1.38
CD44-205ENST00000352818 PLGLAQ15195 96 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 C5orf64Q2M2E5 130 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 DEFB121Q5J5C9 76 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 FAM78BQ5VT40 261 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 SPATA31B1PQ5VZV4 182 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 CTRB2Q6GPI1 263 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 C9orf139Q6ZV77 190 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 LHFPL4Q7Z7J7 247 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 OR2T6Q8NHC8 308 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 TMEM190Q8WZ59 177 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 NPIPB3Q92617 1050 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 RPUSD4Q96CM3 377 aaKnown RBP6.44□□□□□ -1.38
CD44-205ENST00000352818 ACY3Q96HD9 319 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 SSX3Q99909 188 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 SLC25A33Q9BSK2 321 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 PRDM13Q9H4Q3 707 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 TNFRSF19Q9NS68 423 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 LY96Q9Y6Y9 160 aa6.44□□□□□ -1.38
CD44-205ENST00000352818 A0A1W2PRE2 83 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 C1orf196B1AJZ1 125 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 C9JCJ5 164 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 COX7A2P2O60397 106 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 REG1AP05451 166 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 GATA3P23771 443 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 RAB5BP61020 215 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 GNB1P62873 340 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 LCN2P80188 198 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 ELOBQ15370 118 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 MLANAQ16655 118 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 CST9LP1Q5W188 147 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 MIR17HGQ75NE6 70 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 DYNAPQ8N1N2 210 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 FAM24BQ8N5W8 94 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 OR4X1Q8NH49 305 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 TMEM37Q8WXS4 190 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 ISOC2Q96AB3 205 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 ANAPC16Q96DE5 110 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 ZNF503Q96F45 646 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 UHRF2Q96PU4 802 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 TCEAL7Q9BRU2 100 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 DNAJC4Q9NNZ3 241 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 YTHDF2Q9Y5A9 579 aaKnown RBP6.43□□□□□ -1.38
CD44-205ENST00000352818 HILPDAQ9Y5L2 63 aa6.43□□□□□ -1.38
CD44-205ENST00000352818 TRBV24-1A0A075B6N3 115 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 I3L2K1 104 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 FCN1O00602 326 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 FABP1P07148 127 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 UBE2G2P60604 165 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 PAX8Q06710 450 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 FXYD3Q14802 87 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 ADIRFQ15847 76 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 ZNF674Q2M3X9 581 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 KLK9Q2XQG4 91 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 DEFB112Q30KQ8 113 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 C10orf113Q5VZT2 155 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 PATE2Q6UY27 113 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 ZNF562Q6V9R5 426 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 LINC01551Q86U37 167 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 STXBP6Q8NFX7 210 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 Q8WTZ3 238 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 MISP3Q96FF7 219 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 AJUBAQ96IF1 538 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 FAM167A-AS1Q96KT0 104 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 SLC25A2Q9BXI2 301 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 BIN3Q9NQY0 253 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 MRPL36Q9P0J6 103 aaKnown RBP6.42□□□□□ -1.38
CD44-205ENST00000352818 KLK9Q9UKQ9 250 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 DMRT1Q9Y5R6 373 aa6.42□□□□□ -1.38
CD44-205ENST00000352818 SCO2A0A1W2PP80 73 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 PPP1R2P9O14990 202 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 OR7C2O60412 319 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 NDUFB4O95168 129 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 CNIH1O95406 144 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 HLA-DRB1P01911 266 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 IGLC1P0CG04 106 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 FAM106CPP0CH98 169 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 TMEM11P17152 192 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 GATA2P23769 480 aaPredicted RBP6.41□□□□□ -1.38
CD44-205ENST00000352818 BRS3P32247 399 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 ADAMTSL5Q6ZMM2 481 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 TTC9CQ8N5M4 171 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 ARPC1AQ92747 370 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 IMMP2LQ96T52 175 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 PYGO2Q9BRQ0 406 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 WNT10AQ9GZT5 417 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 ZNF355PQ9NSJ1 428 aa6.41□□□□□ -1.38
CD44-205ENST00000352818 IGLV11-55A0A075B6I3 123 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 H7BYZ3 331 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 K7EIM0 57 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 NPFFO15130 113 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 HYPMO75409 117 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 FCGR2BP31994 310 aaPredicted RBP6.4□□□□□ -1.38
CD44-205ENST00000352818 SAA4P35542 130 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 UBE2L3P68036 154 aaKnown RBP6.4□□□□□ -1.38
CD44-205ENST00000352818 ZNF90Q03938 601 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 HES1Q14469 280 aa6.4□□□□□ -1.38
CD44-205ENST00000352818 LCE2DQ5TA82 110 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms