RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 TMEM147Q9BVK8 224 aa12.91□□□□□ -0.34
CKLF-202ENST00000345436 XCL2Q9UBD3 114 aa12.91□□□□□ -0.34
CKLF-202ENST00000345436 RNF24Q9Y225 148 aa12.91□□□□□ -0.34
CKLF-202ENST00000345436 DNAH1Q9P2D7 4330 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 TMEM189A5PLL7 270 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 SMIM9A6NGZ8 99 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 IGLL5B9A064 214 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 RBMY1A1P0DJD3 496 aaKnown RBP12.9□□□□□ -0.34
CKLF-202ENST00000345436 RBMY1CP0DJD4 496 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 ID3Q02535 119 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
CKLF-202ENST00000345436 CSNK1G2-AS1Q8NCQ2 148 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 OR4D5Q8NGN0 318 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 OR1B1Q8NGR6 318 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 RPRMQ9NS64 109 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 PSENENQ9NZ42 101 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 NDUFA13Q9P0J0 144 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 X6R8D5 127 aa12.9□□□□□ -0.34
CKLF-202ENST00000345436 OR4E1P0C645 316 aa12.89□□□□□ -0.35
CKLF-202ENST00000345436 ORM2P19652 201 aa12.89□□□□□ -0.35
CKLF-202ENST00000345436 HLA-DMBP28068 263 aa12.89□□□□□ -0.35
CKLF-202ENST00000345436 TMEM144Q7Z5S9 345 aa12.89□□□□□ -0.35
CKLF-202ENST00000345436 C16orf92Q96LL3 132 aa12.89□□□□□ -0.35
CKLF-202ENST00000345436 SAV1Q9H4B6 383 aaPredicted RBP12.89□□□□□ -0.35
CKLF-202ENST00000345436 LINC00854A0A1B0GVQ3 168 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 SMCO3A2RU48 225 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 IL5P05113 134 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 RAP2BP61225 183 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 SELENOTP62341 195 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 BAK1Q16611 211 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 OR4B1Q8NGF8 309 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 SMIM8Q96KF7 97 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 NEU1Q99519 415 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 SLC25A22Q9H936 323 aa12.88□□□□□ -0.35
CKLF-202ENST00000345436 IGKV1OR2-108A0A075B7D4 117 aa12.87□□□□□ -0.35
CKLF-202ENST00000345436 ZNF98A6NK75 572 aa12.87□□□□□ -0.35
CKLF-202ENST00000345436 H3BP45 60 aa12.87□□□□□ -0.35
CKLF-202ENST00000345436 ADAP1O75689 374 aa12.87□□□□□ -0.35
CKLF-202ENST00000345436 POLR2GP62487 172 aaKnown RBP eCLIP12.87□□□□□ -0.35
CKLF-202ENST00000345436 PSG9Q00887 426 aa12.87□□□□□ -0.35
CKLF-202ENST00000345436 RSG1Q9BU20 258 aa12.87□□□□□ -0.35
CKLF-202ENST00000345436 WDR12Q9GZL7 423 aaKnown RBP12.87□□□□□ -0.35
CKLF-202ENST00000345436 GOLT1BQ9Y3E0 138 aa12.87□□□□□ -0.35
CKLF-202ENST00000345436 PLECQ15149 4684 aaKnown RBP12.87□□□□□ -0.35
CKLF-202ENST00000345436 TEX48A0A1B0GUV7 120 aa12.86□□□□□ -0.35
CKLF-202ENST00000345436 IGKV3-20P01619 116 aa12.86□□□□□ -0.35
CKLF-202ENST00000345436 SPART-AS1P0CW21 52 aa12.86□□□□□ -0.35
CKLF-202ENST00000345436 ACOT7LQ6ZUV0 252 aa12.86□□□□□ -0.35
CKLF-202ENST00000345436 OR10P1Q8NGE3 313 aa12.86□□□□□ -0.35
CKLF-202ENST00000345436 MGAT4CQ9UBM8 478 aa12.86□□□□□ -0.35
CKLF-202ENST00000345436 ELOA3CA0A087WX78 387 aaPredicted RBP12.85□□□□□ -0.35
CKLF-202ENST00000345436 PRSS46E5RG02 174 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 FNDC10F2Z333 226 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 SSSCA1O60232 199 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 HYPMO75409 117 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 DUSP14O95147 198 aaKnown RBP12.85□□□□□ -0.35
CKLF-202ENST00000345436 PAX9P55771 341 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 TAS2R30P59541 319 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 ZNF846Q147U1 533 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 IAH1Q2TAA2 248 aaPredicted RBP12.85□□□□□ -0.35
CKLF-202ENST00000345436 CYP2G1PQ6ZSU1 146 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 NPVFQ9HCQ7 196 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 FLVCR2Q9UPI3 526 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 RFNGQ9Y644 331 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 AGRNO00468 2067 aa12.85□□□□□ -0.35
CKLF-202ENST00000345436 SOCS3O14543 225 aa12.84□□□□□ -0.35
CKLF-202ENST00000345436 SCGB1D2O95969 90 aa12.84□□□□□ -0.35
CKLF-202ENST00000345436 AMBPP02760 352 aa12.84□□□□□ -0.35
CKLF-202ENST00000345436 RPL7P18124 248 aaKnown RBP12.84□□□□□ -0.35
CKLF-202ENST00000345436 DLK1P80370 383 aa12.84□□□□□ -0.35
CKLF-202ENST00000345436 ZNF705AQ6ZN79 300 aaPredicted RBP12.84□□□□□ -0.35
CKLF-202ENST00000345436 Q6ZTC4 211 aa12.84□□□□□ -0.35
CKLF-202ENST00000345436 SLC25A32Q9H2D1 315 aa12.84□□□□□ -0.35
CKLF-202ENST00000345436 GSKIPQ9P0R6 139 aa12.84□□□□□ -0.35
CKLF-202ENST00000345436 HIGD1AQ9Y241 93 aa12.84□□□□□ -0.35
CKLF-202ENST00000345436 IGHV3OR16-12A0A075B7B8 117 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 DEFB131BA0A096LNP1 70 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 TSC22D2O75157 780 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 IL7P13232 177 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 ANXA7P20073 488 aaKnown RBP12.83□□□□□ -0.36
CKLF-202ENST00000345436 PXDC1Q5TGL8 231 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 FAM78BQ5VT40 261 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 MITD1Q8WV92 249 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 DOK5Q9P104 306 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 APLNQ9ULZ1 77 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 ALMS1Q8TCU4 4167 aa12.83□□□□□ -0.36
CKLF-202ENST00000345436 A0A0J9YX75 114 aa12.82□□□□□ -0.36
CKLF-202ENST00000345436 ZNF705FA8MVS1 300 aaPredicted RBP12.82□□□□□ -0.36
CKLF-202ENST00000345436 L7N2F9 121 aa12.82□□□□□ -0.36
CKLF-202ENST00000345436 HBE1P02100 147 aa12.82□□□□□ -0.36
CKLF-202ENST00000345436 OR5G3P0C626 314 aa12.82□□□□□ -0.36
CKLF-202ENST00000345436 ZNF705DP0CH99 300 aaPredicted RBP12.82□□□□□ -0.36
CKLF-202ENST00000345436 ZNF705BP0CI00 300 aaPredicted RBP12.82□□□□□ -0.36
CKLF-202ENST00000345436 VAMP2P63027 116 aa12.82□□□□□ -0.36
CKLF-202ENST00000345436 FGL1Q08830 312 aa12.82□□□□□ -0.36
CKLF-202ENST00000345436 GDF5OSQ5U4N7 250 aa12.82□□□□□ -0.36
CKLF-202ENST00000345436 TEPPQ6URK8 271 aa12.82□□□□□ -0.36
CKLF-202ENST00000345436 LRRC20Q8TCA0 184 aa12.82□□□□□ -0.36
CKLF-202ENST00000345436 TMEM208Q9BTX3 173 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms