RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 TMEM241Q24JQ0 296 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 CYB5R2Q6BCY4 276 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 RNF125Q96EQ8 232 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 ELOVL1Q9BW60 279 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 HIGD1AQ9Y241 93 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 IGF1P05019 195 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 CLEC3BP05452 202 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 CRIP2P52943 208 aaPredicted RBP10.55□□□□□ -0.72
CDC42-202ENST00000344548 ADIRFQ15847 76 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 BLNKQ8WV28 456 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 KLK15Q9H2R5 256 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 NAT8Q9UHE5 227 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 NOTCH2Q04721 2471 aa10.55□□□□□ -0.72
CDC42-202ENST00000344548 YPEL3P61236 119 aaPredicted RBP10.54□□□□□ -0.72
CDC42-202ENST00000344548 CLEC19AQ6UXS0 136 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 LINC00479Q96M42 142 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 DUX5Q96PT3 197 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 SMCO4Q9NRQ5 59 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 HNF1AP20823 631 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 RANP62826 216 aaKnown RBP10.54□□□□□ -0.72
CDC42-202ENST00000344548 C10orf99Q6UWK7 81 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 ZNF600Q6ZNG1 722 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 FAM24BQ8N5W8 94 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 NECAP1Q8NC96 275 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 VN1R17PQ8TDU5 208 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 C17orf77Q96MU5 243 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 YPEL4Q96NS1 127 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 PITPNC1Q9UKF7 332 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 MYO9AB2RTY4 2548 aa10.54□□□□□ -0.72
CDC42-202ENST00000344548 F6UZH7 168 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 OR2C1O95371 312 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 HIST1H1BP16401 226 aaKnown RBP10.53□□□□□ -0.72
CDC42-202ENST00000344548 FCGR2BP31994 310 aaPredicted RBP10.53□□□□□ -0.72
CDC42-202ENST00000344548 KRTAP1-1Q07627 177 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 RNF212Q495C1 297 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 TMEM68Q96MH6 324 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 URGCP-MRPS24S4R325 110 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 TRAV30A0A087WSZ9 112 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 A0A1W2PRE2 83 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 H3BRN7 92 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 TRBV12-3P01733 135 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 MYCNOSP40205 109 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 Q6YL49 198 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 LINC01551Q86U37 167 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 C11orf52Q96A22 123 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 ZNF586Q9NXT0 402 aa10.53□□□□□ -0.72
CDC42-202ENST00000344548 PPP5D1E7EU14 171 aa10.52□□□□□ -0.73
CDC42-202ENST00000344548 HOXA3O43365 443 aaPredicted RBP10.52□□□□□ -0.73
CDC42-202ENST00000344548 NDUFS6O75380 124 aaKnown RBP10.52□□□□□ -0.73
CDC42-202ENST00000344548 NBEAP1P0C6P0 100 aa10.52□□□□□ -0.73
CDC42-202ENST00000344548 RPL35P42766 123 aaKnown RBP10.52□□□□□ -0.73
CDC42-202ENST00000344548 GNG5P63218 68 aa10.52□□□□□ -0.73
CDC42-202ENST00000344548 C9orf139Q6ZV77 190 aa10.52□□□□□ -0.73
CDC42-202ENST00000344548 ZNF329Q86UD4 541 aa10.52□□□□□ -0.73
CDC42-202ENST00000344548 C2CD4CQ8TF44 421 aa10.52□□□□□ -0.73
CDC42-202ENST00000344548 Q8WTZ3 238 aa10.52□□□□□ -0.73
CDC42-202ENST00000344548 TXNDC17Q9BRA2 123 aa10.52□□□□□ -0.73
CDC42-202ENST00000344548 SHANK2-AS3Q9BTD1 123 aa10.52□□□□□ -0.73
CDC42-202ENST00000344548 MRPS12O15235 138 aaKnown RBP10.51□□□□□ -0.73
CDC42-202ENST00000344548 TRGV3P03979 118 aa10.51□□□□□ -0.73
CDC42-202ENST00000344548 PNRC1Q12796 327 aaPredicted RBP10.51□□□□□ -0.73
CDC42-202ENST00000344548 OCC1Q8TAD7 63 aa10.51□□□□□ -0.73
CDC42-202ENST00000344548 HIST1H2BAQ96A08 127 aa10.51□□□□□ -0.73
CDC42-202ENST00000344548 ANK3Q12955 4377 aaKnown RBP10.51□□□□□ -0.73
CDC42-202ENST00000344548 A0A087WWC5 75 aa10.51□□□□□ -0.73
CDC42-202ENST00000344548 K7EN84 100 aa10.51□□□□□ -0.73
CDC42-202ENST00000344548 M0QZK8 103 aa10.51□□□□□ -0.73
CDC42-202ENST00000344548 TOMM20LQ6UXN7 152 aa10.51□□□□□ -0.73
CDC42-202ENST00000344548 TUBA4BQ9H853 241 aa10.51□□□□□ -0.73
CDC42-202ENST00000344548 ARL2-SNX15V9GYD0 113 aa10.51□□□□□ -0.73
CDC42-202ENST00000344548 ZNF98A6NK75 572 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 TSPAN9O75954 239 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 SGK494Q96LW2 274 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 TXN2Q99757 166 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 ZFAND3Q9H8U3 227 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 IGHV3-11P01762 117 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 CRYBA1P05813 215 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 CXCL1P09341 107 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 TPPP2P59282 170 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 RPL15P61313 204 aaKnown RBP10.5□□□□□ -0.73
CDC42-202ENST00000344548 CFHR3Q02985 330 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 GNB4Q9HAV0 340 aa10.5□□□□□ -0.73
CDC42-202ENST00000344548 NF1P21359 2839 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 TRAV34A0A0B4J273 112 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 CLPSL1A2RUU4 121 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 PGPA6NDG6 321 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 AP4M1O00189 453 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 SLC17A3O00476 420 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 FABP1P07148 127 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 ATF4P18848 351 aaPredicted RBP10.49□□□□□ -0.73
CDC42-202ENST00000344548 ATP5G2Q06055 141 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 ELOBQ15370 118 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 EXOC3-AS1Q8N2X6 119 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 EEF1AKMT3Q96AZ1 226 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 VPREB3Q9UKI3 123 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 MTORP42345 2549 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 B4DEV8 164 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 TGOLN2O43493 480 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 IGLV1-40P01703 118 aa10.49□□□□□ -0.73
CDC42-202ENST00000344548 IGLC2P0DOY2 106 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 283 ms