RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 C11orf94C9JXX5 98 aa17.11■□□□□ 0.33
CACNB1-201ENST00000344140 UBE2G2P60604 165 aa17.11■□□□□ 0.33
CACNB1-201ENST00000344140 TMEM95Q3KNT9 176 aa17.11■□□□□ 0.33
CACNB1-201ENST00000344140 CST9LP1Q5W188 147 aa17.11■□□□□ 0.33
CACNB1-201ENST00000344140 ZNF600Q6ZNG1 722 aa17.11■□□□□ 0.33
CACNB1-201ENST00000344140 PAXXQ9BUH6 204 aa17.11■□□□□ 0.33
CACNB1-201ENST00000344140 SLC25A39Q9BZJ4 359 aaPredicted RBP17.11■□□□□ 0.33
CACNB1-201ENST00000344140 TMEM250H0YL14 139 aa17.1■□□□□ 0.33
CACNB1-201ENST00000344140 TGOLN2O43493 480 aa17.1■□□□□ 0.33
CACNB1-201ENST00000344140 IGHG4P01861 327 aa17.1■□□□□ 0.33
CACNB1-201ENST00000344140 Q8N2B8 174 aa17.1■□□□□ 0.33
CACNB1-201ENST00000344140 OR4F5Q8NH21 305 aa17.1■□□□□ 0.33
CACNB1-201ENST00000344140 OR4F4Q96R69 305 aa17.1■□□□□ 0.33
CACNB1-201ENST00000344140 OR51M1Q9H341 326 aa17.1■□□□□ 0.33
CACNB1-201ENST00000344140 UBE2L3P68036 154 aaKnown RBP17.1■□□□□ 0.33
CACNB1-201ENST00000344140 DUX5Q96PT3 197 aa17.1■□□□□ 0.33
CACNB1-201ENST00000344140 PDE6DO43924 150 aa17.09■□□□□ 0.33
CACNB1-201ENST00000344140 RAB9AP51151 201 aa17.09■□□□□ 0.33
CACNB1-201ENST00000344140 CEBPGP53567 150 aa17.09■□□□□ 0.33
CACNB1-201ENST00000344140 GUCA2BQ16661 112 aa17.09■□□□□ 0.33
CACNB1-201ENST00000344140 Q71RC1 249 aaPredicted RBP17.09■□□□□ 0.33
CACNB1-201ENST00000344140 PUS1Q9Y606 427 aaKnown RBP eCLIP17.09■□□□□ 0.33
CACNB1-201ENST00000344140 DNAJC9-AS1A6NH13 148 aa17.08■□□□□ 0.33
CACNB1-201ENST00000344140 FAM74A7A6NL05 159 aa17.08■□□□□ 0.33
CACNB1-201ENST00000344140 OR10J4P0C629 311 aa17.08■□□□□ 0.33
CACNB1-201ENST00000344140 S100A7P31151 101 aa17.08■□□□□ 0.33
CACNB1-201ENST00000344140 SLC35B1P78383 322 aa17.08■□□□□ 0.33
CACNB1-201ENST00000344140 SHANK2-AS3Q9BTD1 123 aa17.08■□□□□ 0.33
CACNB1-201ENST00000344140 KLK15Q9H2R5 256 aa17.08■□□□□ 0.33
CACNB1-201ENST00000344140 HIVEP1P15822 2718 aa17.08■□□□□ 0.32
CACNB1-201ENST00000344140 SNAPINO95295 136 aa17.07■□□□□ 0.32
CACNB1-201ENST00000344140 RELQ04864 619 aaPredicted RBP17.07■□□□□ 0.32
CACNB1-201ENST00000344140 USF2Q15853 346 aaPredicted RBP17.07■□□□□ 0.32
CACNB1-201ENST00000344140 GNB4Q9HAV0 340 aa17.07■□□□□ 0.32
CACNB1-201ENST00000344140 YTHDF2Q9Y5A9 579 aaKnown RBP17.07■□□□□ 0.32
CACNB1-201ENST00000344140 H3BRN7 92 aa17.07■□□□□ 0.32
CACNB1-201ENST00000344140 CLDN34H7C241 214 aa17.07■□□□□ 0.32
CACNB1-201ENST00000344140 PSMB8P28062 276 aa17.07■□□□□ 0.32
CACNB1-201ENST00000344140 ZNF329Q86UD4 541 aa17.07■□□□□ 0.32
CACNB1-201ENST00000344140 CDC42EP3Q9UKI2 254 aa17.07■□□□□ 0.32
CACNB1-201ENST00000344140 RNF24Q9Y225 148 aa17.07■□□□□ 0.32
CACNB1-201ENST00000344140 F6UZH7 168 aa17.06■□□□□ 0.32
CACNB1-201ENST00000344140 BMPR1BO00238 502 aa17.06■□□□□ 0.32
CACNB1-201ENST00000344140 ATP5G3P48201 142 aa17.06■□□□□ 0.32
CACNB1-201ENST00000344140 FAM90A2PQ658T7 463 aa17.06■□□□□ 0.32
CACNB1-201ENST00000344140 FXYD5Q96DB9 178 aa17.06■□□□□ 0.32
CACNB1-201ENST00000344140 TMEM14CQ9P0S9 112 aa17.06■□□□□ 0.32
CACNB1-201ENST00000344140 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.05■□□□□ 0.32
CACNB1-201ENST00000344140 A0A1W2PRE2 83 aa17.05■□□□□ 0.32
CACNB1-201ENST00000344140 PYYP10082 97 aa17.05■□□□□ 0.32
CACNB1-201ENST00000344140 SRD5A1P18405 259 aa17.05■□□□□ 0.32
CACNB1-201ENST00000344140 FAM209BQ5JX69 171 aa17.05■□□□□ 0.32
CACNB1-201ENST00000344140 TEX38Q6PEX7 206 aa17.05■□□□□ 0.32
CACNB1-201ENST00000344140 NKX6-2Q9C056 277 aaPredicted RBP17.05■□□□□ 0.32
CACNB1-201ENST00000344140 KIAA0141Q14154 515 aaPredicted RBP17.05■□□□□ 0.32
CACNB1-201ENST00000344140 RABAC1Q9UI14 185 aa17.05■□□□□ 0.32
CACNB1-201ENST00000344140 GP9P14770 177 aa17.04■□□□□ 0.32
CACNB1-201ENST00000344140 ARL3P36405 182 aa17.04■□□□□ 0.32
CACNB1-201ENST00000344140 LEMD1Q68G75 181 aa17.04■□□□□ 0.32
CACNB1-201ENST00000344140 ZNF343Q6P1L6 599 aa17.04■□□□□ 0.32
CACNB1-201ENST00000344140 TOMM20LQ6UXN7 152 aa17.04■□□□□ 0.32
CACNB1-201ENST00000344140 NIPSNAP3BQ9BS92 247 aa17.04■□□□□ 0.32
CACNB1-201ENST00000344140 F8P00451 2351 aa17.04■□□□□ 0.32
CACNB1-201ENST00000344140 ELANEP08246 267 aa17.03■□□□□ 0.32
CACNB1-201ENST00000344140 FOXE3Q13461 319 aa17.03■□□□□ 0.32
CACNB1-201ENST00000344140 FAM74A3Q4VXF1 159 aa17.03■□□□□ 0.32
CACNB1-201ENST00000344140 HIVEP2P31629 2446 aa17.03■□□□□ 0.32
CACNB1-201ENST00000344140 ZNF98A6NK75 572 aa17.03■□□□□ 0.32
CACNB1-201ENST00000344140 BPIFA4PQ86YQ2 179 aa17.03■□□□□ 0.32
CACNB1-201ENST00000344140 OR4X2Q8NGF9 303 aa17.03■□□□□ 0.32
CACNB1-201ENST00000344140 ZNF418Q8TF45 676 aaPredicted RBP17.03■□□□□ 0.32
CACNB1-201ENST00000344140 ZNF414Q96IQ9 312 aa17.03■□□□□ 0.32
CACNB1-201ENST00000344140 ZFAND3Q9H8U3 227 aa17.03■□□□□ 0.32
CACNB1-201ENST00000344140 MAST4O15021 2626 aa17.02■□□□□ 0.32
CACNB1-201ENST00000344140 IGHV3-35A0A0C4DH35 117 aa17.02■□□□□ 0.32
CACNB1-201ENST00000344140 FAM181BA6NEQ2 426 aa17.02■□□□□ 0.32
CACNB1-201ENST00000344140 PPP5D1E7EU14 171 aa17.02■□□□□ 0.32
CACNB1-201ENST00000344140 RPL15P61313 204 aaKnown RBP17.02■□□□□ 0.32
CACNB1-201ENST00000344140 CLRN3Q8NCR9 226 aa17.02■□□□□ 0.32
CACNB1-201ENST00000344140 ESM1Q9NQ30 184 aa17.02■□□□□ 0.32
CACNB1-201ENST00000344140 INAFM1C9JVW0 142 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 H3BQ15 152 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 IGHV3-11P01762 117 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 NBEAP1P0C6P0 100 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 ATRAIDQ6UW56 229 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 LCNL1Q6ZST4 164 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 ZNF727A8MUV8 499 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 SCO1O75880 301 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 HIST1H1EP10412 219 aaKnown RBP17.01■□□□□ 0.31
CACNB1-201ENST00000344140 RPUSD4Q96CM3 377 aaKnown RBP17.01■□□□□ 0.31
CACNB1-201ENST00000344140 SMIM7Q9BQ49 75 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 SERTAD4Q9NUC0 356 aa17.01■□□□□ 0.31
CACNB1-201ENST00000344140 PARLQ9H300 379 aa17■□□□□ 0.31
CACNB1-201ENST00000344140 GGTLC3B5MD39 225 aa16.99■□□□□ 0.31
CACNB1-201ENST00000344140 RNASE1P07998 156 aaKnown RBP16.99■□□□□ 0.31
CACNB1-201ENST00000344140 RNF152Q8N8N0 203 aa16.99■□□□□ 0.31
CACNB1-201ENST00000344140 OR4F17Q8NGA8 305 aa16.99■□□□□ 0.31
CACNB1-201ENST00000344140 C11orf52Q96A22 123 aa16.99■□□□□ 0.31
CACNB1-201ENST00000344140 TVP23CQ96ET8 276 aa16.99■□□□□ 0.31
CACNB1-201ENST00000344140 M0R036 132 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms