RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 LDLRAD2Q5SZI1 272 aa7□□□□□ -1.29
FGD6-201ENST00000343958 OR4X2Q8NGF9 303 aa7□□□□□ -1.29
FGD6-201ENST00000343958 SDK1Q7Z5N4 2213 aa7□□□□□ -1.29
FGD6-201ENST00000343958 DPM2O94777 84 aa7□□□□□ -1.29
FGD6-201ENST00000343958 LOXP28300 417 aaPredicted RBP7□□□□□ -1.29
FGD6-201ENST00000343958 CD300EQ496F6 205 aaPredicted RBP7□□□□□ -1.29
FGD6-201ENST00000343958 TRPM6Q9BX84 2022 aa7□□□□□ -1.29
FGD6-201ENST00000343958 PLXNA3P51805 1871 aa7□□□□□ -1.29
FGD6-201ENST00000343958 TOMM40O96008 361 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 RNF5Q99942 180 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 AMN1Q8IY45 258 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 SMAGPQ0VAQ4 97 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 PRSS22Q9GZN4 317 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 NUTF2P61970 127 aaKnown RBP6.99□□□□□ -1.29
FGD6-201ENST00000343958 ZNF833PQ6ZTB9 187 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 H3BUX3 64 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 OVOL1O14753 267 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 TMEM155Q4W5P6 130 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 DKK1O94907 266 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 PLA2G2CQ5R387 149 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 ARMS2P0C7Q2 107 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 NDUFA4L2Q9NRX3 87 aa6.99□□□□□ -1.29
FGD6-201ENST00000343958 C11orf53Q8IXP5 236 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 RNF138Q8WVD3 245 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 SHANK2-AS3Q9BTD1 123 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 BPESC1Q9GZL8 116 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 FAM215AQ9Y5M1 114 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 LYPD6Q86Y78 171 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 RNF182Q8N6D2 247 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 Q8TCH9 128 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 MYO7AQ13402 2215 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 C3orf36Q3SXR2 165 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 C5orf30Q96GV9 206 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 TOMM7Q9P0U1 55 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 A0A087X0K7 114 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 TMEM14BQ9NUH8 114 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 TRAV2A0A0B4J234 112 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 SRRM4A7MD48 611 aaKnown RBP6.98□□□□□ -1.29
FGD6-201ENST00000343958 H7C1H1 209 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 CEACAM8P31997 349 aaPredicted RBP6.98□□□□□ -1.29
FGD6-201ENST00000343958 IGLV1-44P01699 117 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 GGTLC3B5MD39 225 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 M0R1W7 72 aa6.98□□□□□ -1.29
FGD6-201ENST00000343958 ITGB1BP1O14713 200 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 FAM120AOSQ5T036 256 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 MINOS1Q5TGZ0 78 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 SSC4DQ8WTU2 575 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 PEMTQ9UBM1 199 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 MINOS1-NBL1R4GNA1 71 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 TRAV12-3A0A0B4J271 114 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 NXT2Q9NPJ8 142 aaKnown RBP6.97□□□□□ -1.29
FGD6-201ENST00000343958 GOLGA4Q13439 2230 aaKnown RBP6.97□□□□□ -1.29
FGD6-201ENST00000343958 ZNF815PA8K554 130 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 HTN3P15516 51 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 PLA2G5P39877 138 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 NSUN5P1Q3KNT7 163 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 IFI27P40305 119 aaPredicted RBP6.97□□□□□ -1.29
FGD6-201ENST00000343958 RIPPLY3P57055 190 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 GUSBP1Q15486 140 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 MPV17L2Q567V2 206 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 STHQ8IWL8 128 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 SLX1AQ9BQ83 275 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 FCN3O75636 299 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 CIRBPQ14011 172 aaKnown RBP6.97□□□□□ -1.29
FGD6-201ENST00000343958 TMEM249Q2WGJ8 235 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 SCN5AQ14524 2016 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 PAPPA-AS1Q5QFB9 102 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 CDPF1Q6NVV7 123 aa6.97□□□□□ -1.29
FGD6-201ENST00000343958 A0A0U1RRA0 63 aa6.96□□□□□ -1.29
FGD6-201ENST00000343958 ATP6V0E1O15342 81 aa6.96□□□□□ -1.29
FGD6-201ENST00000343958 IGHV4-39P01824 125 aa6.96□□□□□ -1.29
FGD6-201ENST00000343958 TDGF1P3P51864 188 aa6.96□□□□□ -1.29
FGD6-201ENST00000343958 V9GYV3 84 aa6.96□□□□□ -1.29
FGD6-201ENST00000343958 FRMPD3Q5JV73 1810 aa6.96□□□□□ -1.29
FGD6-201ENST00000343958 DUSP14O95147 198 aaKnown RBP6.96□□□□□ -1.29
FGD6-201ENST00000343958 WT1-ASQ06250 92 aa6.96□□□□□ -1.29
FGD6-201ENST00000343958 G3V318 75 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 DLEU1O43261 78 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 WISP2O76076 250 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 TMEM158Q8WZ71 300 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 TMEM101Q96IK0 257 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 NPC2P61916 151 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 MEGF9Q9H1U4 602 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 TSC2P49815 1807 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 F2Z2F3 143 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 FNDC10F2Z333 226 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 SYS1-DBNDD2H3BUS1 97 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 ZNF688P0C7X2 276 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 VCX2Q9H322 139 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 IGHV2-5P01817 119 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 CD28P10747 220 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 KRTAP27-1Q3LI81 207 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 RASL11AQ6T310 242 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 ANKRD36A6QL64 1941 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 PRTN3P24158 256 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 COL4A3Q01955 1670 aa6.96□□□□□ -1.3
FGD6-201ENST00000343958 TRGV2A0A075B6R0 118 aa6.95□□□□□ -1.3
FGD6-201ENST00000343958 SAA4P35542 130 aa6.95□□□□□ -1.3
FGD6-201ENST00000343958 C14orf178Q8N769 122 aaPredicted RBP6.95□□□□□ -1.3
FGD6-201ENST00000343958 MS4A6AQ9H2W1 248 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms