RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 F8VWA3 439 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 RPL15P61313 204 aaKnown RBP11.53□□□□□ -0.56
PDE4D-203ENST00000340635 UBE2E2Q96LR5 201 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 SIGLEC12Q96PQ1 595 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 WFDC6Q9BQY6 131 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 LIMS2Q7Z4I7 341 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 OR9G9P0C7N8 305 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 TMEM190Q8WZ59 177 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 SHANK1Q9Y566 2161 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 SPSB3Q6PJ21 355 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 HIST1H2BLQ99880 126 aa11.53□□□□□ -0.56
PDE4D-203ENST00000340635 CACNA1BQ00975 2339 aa11.52□□□□□ -0.56
PDE4D-203ENST00000340635 NHSL1Q5SYE7 1610 aa11.52□□□□□ -0.56
PDE4D-203ENST00000340635 A0A087X0K7 114 aa11.52□□□□□ -0.56
PDE4D-203ENST00000340635 SLC22A18ASQ8N1D0 253 aa11.52□□□□□ -0.56
PDE4D-203ENST00000340635 UCP1P25874 307 aa11.52□□□□□ -0.56
PDE4D-203ENST00000340635 SLC25A48Q6ZT89 311 aaKnown RBP11.52□□□□□ -0.56
PDE4D-203ENST00000340635 PRB4P10163 310 aaPredicted RBP11.52□□□□□ -0.57
PDE4D-203ENST00000340635 UBE2V1Q13404 147 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 FBLIM1Q8WUP2 373 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.52□□□□□ -0.57
PDE4D-203ENST00000340635 A0A0G2JMM0 328 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 A0A1W2PPB8 328 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 KIR3DP1A8MWS1 328 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 IGHG4P01861 327 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 C15orf32Q32M92 178 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 LY6G5BQ8NDX9 201 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 COL6A6A6NMZ7 2263 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 C1QL4Q86Z23 238 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 ZNF525Q8N782 197 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 SMIM2Q9BVW6 85 aa11.52□□□□□ -0.57
PDE4D-203ENST00000340635 TBX6O95947 436 aaPredicted RBP11.51□□□□□ -0.57
PDE4D-203ENST00000340635 THBDP07204 575 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 KIR3DS1Q14943 382 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 ADAMTSL5Q6ZMM2 481 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 C1QL2Q7Z5L3 287 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 LOC101059948A0A1B0GTJ6 334 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 RNASE6Q93091 150 aaKnown RBP11.51□□□□□ -0.57
PDE4D-203ENST00000340635 NOTCH3Q9UM47 2321 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 A0A1W2PPI3 338 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 FCN3O75636 299 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 CCL3L1P16619 93 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 KLF5Q13887 457 aaPredicted RBP11.51□□□□□ -0.57
PDE4D-203ENST00000340635 BAALCQ8WXS3 180 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 AHDC1Q5TGY3 1603 aaPredicted RBP11.51□□□□□ -0.57
PDE4D-203ENST00000340635 CRLF1O75462 422 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 PPP1R32Q7Z5V6 425 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 SVIPQ8NHG7 77 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 DEPPQ9NTK1 212 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 ZNF831Q5JPB2 1677 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 DYSFO75923 2080 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 A0A0G2JK05 382 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 GAGE12BA1L429 117 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 RAMP3O60896 148 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 PSG3Q16557 428 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 KLHL30-AS1Q8NEE0 82 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 PTPRFP10586 1907 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 F5H768 121 aa11.51□□□□□ -0.57
PDE4D-203ENST00000340635 YPEL1O60688 119 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 LCNL1Q6ZST4 164 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 YPEL2Q96QA6 119 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 GAGE12JA6NER3 117 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 NBL1P41271 181 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 GAGE1Q13065 139 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 GAGE4Q13068 117 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 GAGE5Q13069 117 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 GAGE6Q13070 117 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 FAM181AQ8N9Y4 354 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 ITGBL1O95965 494 aaPredicted RBP11.5□□□□□ -0.57
PDE4D-203ENST00000340635 TM2D1Q9BX74 207 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 TSC2P49815 1807 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 EFNB3Q15768 340 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
PDE4D-203ENST00000340635 RMI2Q96E14 147 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 LINC00527Q9UJ94 153 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 SCRT2Q9NQ03 307 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 RNF114Q9Y508 228 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 TRBV7-1A0A0A6YYK4 115 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 HEPN1Q6WQI6 88 aa11.5□□□□□ -0.57
PDE4D-203ENST00000340635 IFITM1P13164 125 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 PFN2P35080 140 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 ZNF138P52744 262 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 DSCR9P59020 149 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 PMS2P5A8MQ11 134 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 TCF15Q12870 199 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 C1orf194Q5T5A4 169 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 RPRMLQ8N4K4 120 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 OCC1Q8TAD7 63 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 MBNL3Q9NUK0 354 aaKnown RBP11.49□□□□□ -0.57
PDE4D-203ENST00000340635 TMEM242Q9NWH2 141 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 TANC2Q9HCD6 1990 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 TMEM219Q86XT9 240 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 NABP1Q96AH0 204 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 hDV102S1A0JD36 115 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 TIMM23O14925 209 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 NEGR1Q7Z3B1 354 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 LINC00477Q96M19 166 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 SLC25A39Q9BZJ4 359 aaPredicted RBP11.49□□□□□ -0.57
PDE4D-203ENST00000340635 SPANXCQ9NY87 97 aa11.49□□□□□ -0.57
PDE4D-203ENST00000340635 PIN1P1O15428 100 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms