RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 TRAV5A0A0B4J249 113 aa11.95□□□□□ -0.5
TUBB4B-201ENST00000340384 A0A0U1RQK1 487 aa11.95□□□□□ -0.5
TUBB4B-201ENST00000340384 HELTA6NFD8 242 aa11.95□□□□□ -0.5
TUBB4B-201ENST00000340384 CXCL1P09341 107 aa11.95□□□□□ -0.5
TUBB4B-201ENST00000340384 RD3LP0DJH9 198 aa11.95□□□□□ -0.5
TUBB4B-201ENST00000340384 ZFP82Q8N141 532 aa11.95□□□□□ -0.5
TUBB4B-201ENST00000340384 DERL1Q9BUN8 251 aa11.95□□□□□ -0.5
TUBB4B-201ENST00000340384 HIVEP2P31629 2446 aa11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 IGHV7-81A0A0B4J1V7 117 aa11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 GNG7O60262 68 aa11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 TOMM40O96008 361 aa11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 PSG1P11464 419 aa11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 RPL35P42766 123 aaKnown RBP11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 LYZP61626 148 aa11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 SUMO1P63165 101 aaKnown RBP11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 TIGITQ495A1 244 aa11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 SAV1Q9H4B6 383 aaPredicted RBP11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 RNF24Q9Y225 148 aa11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 FN1P02751 2386 aaKnown RBP11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 TEP1Q99973 2627 aaKnown RBP11.94□□□□□ -0.5
TUBB4B-201ENST00000340384 GGTLC3B5MD39 225 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 CRYBB3P26998 211 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 S100A7P31151 101 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 GNG4P50150 75 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 YPEL3P61236 119 aaPredicted RBP11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 FBLN7Q53RD9 439 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 ASPHD1Q5U4P2 390 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 MORN5Q5VZ52 161 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 C9orf139Q6ZV77 190 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 OR5T1Q8NG75 326 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 SGMS2Q8NHU3 365 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 C2CD4CQ8TF44 421 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 FXYD5Q96DB9 178 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 TXN2Q99757 166 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 INAFM1C9JVW0 142 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 PFN1P07737 140 aaKnown RBP11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 PYYP10082 97 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 TAS2R60P59551 318 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 NDPQ00604 133 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 FAM110DQ8TAY7 271 aaPredicted RBP11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 TMEM14CQ9P0S9 112 aa11.93□□□□□ -0.5
TUBB4B-201ENST00000340384 PLXNB1O43157 2135 aa11.92□□□□□ -0.5
TUBB4B-201ENST00000340384 IGKV1-17P01599 117 aa11.92□□□□□ -0.5
TUBB4B-201ENST00000340384 CNN1P51911 297 aaKnown RBP11.92□□□□□ -0.5
TUBB4B-201ENST00000340384 OR10G8Q8NGN5 311 aa11.92□□□□□ -0.5
TUBB4B-201ENST00000340384 OCC1Q8TAD7 63 aa11.92□□□□□ -0.5
TUBB4B-201ENST00000340384 PYGO2Q9BRQ0 406 aa11.92□□□□□ -0.5
TUBB4B-201ENST00000340384 MEGF9Q9H1U4 602 aa11.92□□□□□ -0.5
TUBB4B-201ENST00000340384 C21orf62Q9NYP8 219 aa11.92□□□□□ -0.5
TUBB4B-201ENST00000340384 MOB4Q9Y3A3 225 aa11.92□□□□□ -0.5
TUBB4B-201ENST00000340384 TRBV20OR9-2A0A075B6H5 130 aa11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 PPP5D1E7EU14 171 aa11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 DEFB112Q30KQ8 113 aa11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 Q56UQ5 140 aa11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 CENPWQ5EE01 88 aa11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 NECAP1Q8NC96 275 aa11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 PIFOQ8TCI5 191 aa11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 VN1R17PQ8TDU5 208 aa11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 SLC25A39Q9BZJ4 359 aaPredicted RBP11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 GAR1Q9NY12 217 aaKnown RBP11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 MRPL27Q9P0M9 148 aaKnown RBP11.91□□□□□ -0.5
TUBB4B-201ENST00000340384 GGCTO75223 188 aaKnown RBP11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 S100A9P06702 114 aaKnown RBP11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 NBEAP1P0C6P0 100 aa11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 FCGR2BP31994 310 aaPredicted RBP11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 KLK9Q2XQG4 91 aa11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 TEX38Q6PEX7 206 aa11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 UNQ5815/PRO19632Q6UWF5 114 aa11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 ZNF329Q86UD4 541 aa11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 ELOVL1Q9BW60 279 aa11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 SRD5A3Q9H8P0 318 aa11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 CDC42EP3Q9UKI2 254 aa11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 KLK9Q9UKQ9 250 aa11.9□□□□□ -0.5
TUBB4B-201ENST00000340384 TRAV9-1A0A075B6T8 112 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 PEX7O00628 323 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 EGR2P11161 476 aaPredicted RBP11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 GP9P14770 177 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 FAM3BP58499 235 aaPredicted RBP11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 FOXL1Q12952 345 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 RNF125Q96EQ8 232 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 PRDM13Q9H4Q3 707 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 FBXL7Q9UJT9 491 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 NIPBLQ6KC79 2804 aaeCLIP11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 WI2-2373I1.2A0A1W2PRP0 233 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 C5orf52A6NGY3 159 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 AP4M1O00189 453 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 OR2J3O76001 311 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 RPL19P84098 196 aaKnown RBP11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 BPIFA4PQ86YQ2 179 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 C5orf56Q8N8D9 126 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 SHANK2-AS3Q9BTD1 123 aa11.89□□□□□ -0.51
TUBB4B-201ENST00000340384 A0A1W2PPQ1 181 aa11.88□□□□□ -0.51
TUBB4B-201ENST00000340384 PGPEP1LA6NFU8 196 aa11.88□□□□□ -0.51
TUBB4B-201ENST00000340384 H3BRN7 92 aa11.88□□□□□ -0.51
TUBB4B-201ENST00000340384 NDUFB8O95169 186 aa11.88□□□□□ -0.51
TUBB4B-201ENST00000340384 TYMSP04818 313 aa11.88□□□□□ -0.51
TUBB4B-201ENST00000340384 IL4P05112 153 aa11.88□□□□□ -0.51
TUBB4B-201ENST00000340384 SLC25A5P05141 298 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms