RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 KIR3DS1Q14943 382 aa16.34■□□□□ 0.21
RUNX3-202ENST00000338888 RUSC1-AS1Q66K80 236 aa16.34■□□□□ 0.21
RUNX3-202ENST00000338888 OR2K2Q8NGT1 345 aa16.34■□□□□ 0.21
RUNX3-202ENST00000338888 PERPQ96FX8 193 aa16.34■□□□□ 0.21
RUNX3-202ENST00000338888 IGHV1-18A0A0C4DH31 117 aa16.34■□□□□ 0.21
RUNX3-202ENST00000338888 A0A0G2JLM5 398 aa16.34■□□□□ 0.21
RUNX3-202ENST00000338888 SPRY3O43610 288 aa16.34■□□□□ 0.21
RUNX3-202ENST00000338888 OR8A1Q8NGG7 326 aa16.34■□□□□ 0.21
RUNX3-202ENST00000338888 PRSS3P2Q8NHM4 247 aa16.34■□□□□ 0.21
RUNX3-202ENST00000338888 FAM106CPP0CH98 169 aa16.33■□□□□ 0.21
RUNX3-202ENST00000338888 FAM106AQ4KMX7 169 aa16.33■□□□□ 0.21
RUNX3-202ENST00000338888 STXBP6Q8NFX7 210 aa16.33■□□□□ 0.21
RUNX3-202ENST00000338888 OR1N2Q8NGR9 330 aa16.33■□□□□ 0.21
RUNX3-202ENST00000338888 MRPL20Q9BYC9 149 aaKnown RBP16.33■□□□□ 0.21
RUNX3-202ENST00000338888 Q9H3A6 140 aa16.33■□□□□ 0.21
RUNX3-202ENST00000338888 SLC25A48Q6ZT89 311 aaKnown RBP16.33■□□□□ 0.2
RUNX3-202ENST00000338888 FA2HQ7L5A8 372 aa16.33■□□□□ 0.2
RUNX3-202ENST00000338888 DMXL1Q9Y485 3027 aa16.33■□□□□ 0.2
RUNX3-202ENST00000338888 CFHR2P36980 270 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 CSN1S1P47710 185 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 FLYWCH2Q96CP2 140 aaKnown RBP16.32■□□□□ 0.2
RUNX3-202ENST00000338888 ICE1Q9Y2F5 2266 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 CADP27708 2225 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 DSCAML1Q8TD84 2053 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 CGB1A6NKQ9 187 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 THAP8Q8NA92 274 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 CNOT1A5YKK6 2376 aaKnown RBP16.32■□□□□ 0.2
RUNX3-202ENST00000338888 hADV38S2A0JD32 116 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 ARMS2P0C7Q2 107 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 NHLH1Q02575 133 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 NEGR1Q7Z3B1 354 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 PIP4P2Q8N4L2 257 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 DEFB124Q8NES8 71 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 THYN1Q9P016 225 aa16.32■□□□□ 0.2
RUNX3-202ENST00000338888 C22orf46C9J442 243 aa16.31■□□□□ 0.2
RUNX3-202ENST00000338888 NPIPB6E9PJ23 425 aa16.31■□□□□ 0.2
RUNX3-202ENST00000338888 LHBP01229 141 aa16.31■□□□□ 0.2
RUNX3-202ENST00000338888 OSR1Q8TAX0 266 aaPredicted RBP16.31■□□□□ 0.2
RUNX3-202ENST00000338888 PRB4P10163 310 aaPredicted RBP16.31■□□□□ 0.2
RUNX3-202ENST00000338888 LOXL1Q08397 574 aaPredicted RBP16.31■□□□□ 0.2
RUNX3-202ENST00000338888 PRNTQ86SH4 94 aa16.31■□□□□ 0.2
RUNX3-202ENST00000338888 CCL13Q99616 98 aa16.31■□□□□ 0.2
RUNX3-202ENST00000338888 RPUSD1Q9UJJ7 312 aaKnown RBP16.31■□□□□ 0.2
RUNX3-202ENST00000338888 SPAARA0A1B0GVQ0 90 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 KIR2DL2P43627 348 aaPredicted RBP16.3■□□□□ 0.2
RUNX3-202ENST00000338888 OR5AN1Q8NGI8 311 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 TMEM186Q96B77 213 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 JKAMPQ9P055 326 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 A0A1B0GUT8 65 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 OVOL3O00110 214 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 GOSR1O95249 250 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 C1orf185Q5T7R7 199 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 ZCCHC24Q8N2G6 241 aaKnown RBP16.3■□□□□ 0.2
RUNX3-202ENST00000338888 FAM216BQ8N7L0 139 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 SRSF12Q8WXF0 261 aaKnown RBP16.3■□□□□ 0.2
RUNX3-202ENST00000338888 ASCL2Q99929 193 aa16.3■□□□□ 0.2
RUNX3-202ENST00000338888 LOC389332A0A1B0GUA5 103 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 IFI27P40305 119 aaPredicted RBP16.29■□□□□ 0.2
RUNX3-202ENST00000338888 SUB1P53999 127 aaKnown RBP eCLIP16.29■□□□□ 0.2
RUNX3-202ENST00000338888 Q86TA4 180 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 BOD1L2Q8IYS8 172 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 OR4A5Q8NH83 315 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 VSTM2AQ8TAG5 236 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 SPCS1Q9Y6A9 102 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 IGHV3-21A0A0B4J1V1 117 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 A1L4Q6 167 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 IGLV1-44P01699 117 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 ATP1A1-AS1Q5TC04 95 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 SVILO95425 2214 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 PLXNB1O43157 2135 aa16.29■□□□□ 0.2
RUNX3-202ENST00000338888 ZNF318Q5VUA4 2279 aa16.28■□□□□ 0.2
RUNX3-202ENST00000338888 GP9P14770 177 aa16.28■□□□□ 0.2
RUNX3-202ENST00000338888 FXYD7P58549 80 aa16.28■□□□□ 0.2
RUNX3-202ENST00000338888 PRSS57Q6UWY2 283 aa16.28■□□□□ 0.2
RUNX3-202ENST00000338888 TPPP3Q9BW30 176 aa16.28■□□□□ 0.2
RUNX3-202ENST00000338888 A0A096LNJ9 63 aa16.28■□□□□ 0.2
RUNX3-202ENST00000338888 HCP5Q6MZN7 132 aa16.28■□□□□ 0.2
RUNX3-202ENST00000338888 GOLT1AQ6ZVE7 132 aa16.28■□□□□ 0.2
RUNX3-202ENST00000338888 NPFFR1Q9GZQ6 430 aa16.28■□□□□ 0.2
RUNX3-202ENST00000338888 TANC2Q9HCD6 1990 aa16.27■□□□□ 0.2
RUNX3-202ENST00000338888 LGALS7P47929 136 aa16.27■□□□□ 0.2
RUNX3-202ENST00000338888 RBPJQ06330 500 aa16.27■□□□□ 0.2
RUNX3-202ENST00000338888 HSD52Q0P140 79 aa16.27■□□□□ 0.2
RUNX3-202ENST00000338888 LOC400499M0QZD8 3231 aa16.27■□□□□ 0.2
RUNX3-202ENST00000338888 A0A1W2PPM0 123 aa16.27■□□□□ 0.19
RUNX3-202ENST00000338888 SMAD7O15105 426 aaKnown RBP16.27■□□□□ 0.19
RUNX3-202ENST00000338888 PLP1P60201 277 aa16.27■□□□□ 0.19
RUNX3-202ENST00000338888 CACNG7P62955 275 aa16.27■□□□□ 0.19
RUNX3-202ENST00000338888 ZNF833PQ6ZTB9 187 aa16.27■□□□□ 0.19
RUNX3-202ENST00000338888 EXOC3-AS1Q8N2X6 119 aa16.27■□□□□ 0.19
RUNX3-202ENST00000338888 GAFA1Q96PS6 74 aa16.27■□□□□ 0.19
RUNX3-202ENST00000338888 RIF1Q5UIP0 2472 aaKnown RBP16.26■□□□□ 0.19
RUNX3-202ENST00000338888 INS-IGF2F8WCM5 200 aa16.26■□□□□ 0.19
RUNX3-202ENST00000338888 GNG7O60262 68 aa16.26■□□□□ 0.19
RUNX3-202ENST00000338888 C9orf106Q8NAJ2 232 aa16.26■□□□□ 0.19
RUNX3-202ENST00000338888 ZFHX2Q9C0A1 2572 aaPredicted RBP16.26■□□□□ 0.19
RUNX3-202ENST00000338888 ZFHX4Q86UP3 3567 aa16.26■□□□□ 0.19
RUNX3-202ENST00000338888 RIGQ13278 110 aa16.26■□□□□ 0.19
RUNX3-202ENST00000338888 ADAMTSL5Q6ZMM2 481 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms