RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 hDV102S1A0JD36 115 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 VGLL1Q99990 258 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 PYGO2Q9BRQ0 406 aa4.56□□□□□ -1.68
PTPRB-202ENST00000334414 TMEM92Q6UXU6 159 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 RNF166Q96A37 237 aaPredicted RBP4.55□□□□□ -1.68
PTPRB-202ENST00000334414 STHQ8IWL8 128 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 RPP25LQ8N5L8 163 aaKnown RBP4.55□□□□□ -1.68
PTPRB-202ENST00000334414 NPYP01303 97 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 SSC4DQ8WTU2 575 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 IL15RAQ13261 267 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 TMEM256Q8N2U0 113 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 USMG5Q96IX5 58 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 A0A1W2PRD5 423 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 A0A1W2PRF3 423 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 A0A1W2PRM7 423 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 PRSS12P56730 875 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 NPIPB5A8MRT5 1133 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 CDKN1AP38936 164 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 ZC2HC1BQ5TFG8 222 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 ZNF826PQ6ZT77 177 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 EGR1P18146 543 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 MINOS1Q5TGZ0 78 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 MINOS1-NBL1R4GNA1 71 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 LYPD6BQ8NI32 183 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 KMT2EQ8IZD2 1858 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 HERVK_113P63121 156 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 FAM104BQ5XKR9 115 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 COL11A2P13942 1736 aaPredicted RBP4.55□□□□□ -1.68
PTPRB-202ENST00000334414 H3BTX0 84 aa4.55□□□□□ -1.68
PTPRB-202ENST00000334414 MRPL23Q16540 153 aaKnown RBP4.54□□□□□ -1.68
PTPRB-202ENST00000334414 MCM3APO60318 1980 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 CHD5Q8TDI0 1954 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 A0A1W2PPI3 338 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 PAX8Q06710 450 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 PAQR4Q8N4S7 273 aaPredicted RBP4.54□□□□□ -1.68
PTPRB-202ENST00000334414 CCL3L1P16619 93 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 TEN1Q86WV5 123 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 ANAPC10Q9UM13 185 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 NPSP0C0P6 89 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 PYYP10082 97 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 IL9P15248 144 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 CD33P20138 364 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 SPEM2Q0P670 501 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 COA6Q5JTJ3 125 aaKnown RBP4.54□□□□□ -1.68
PTPRB-202ENST00000334414 C5orf47Q569G3 176 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 TMEM243Q9BU79 118 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 CLEC19AQ6UXS0 136 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 C1QL2Q7Z5L3 287 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 PPP1R32Q7Z5V6 425 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 DEFB125Q8N687 156 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 SHANK2-AS3Q9BTD1 123 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 LOC102723996A0A087X1L8 192 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 IGHV3-72A0A0B4J1Y9 119 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV1D-13A0A0B4J2D9 117 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV3OR2-268A0A0C4DH90 116 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 IGKV1-13P0DP09 117 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 VSIRQ9H7M9 311 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 TNS1Q9HBL0 1735 aaKnown RBP4.54□□□□□ -1.68
PTPRB-202ENST00000334414 RBAKDNA6NC62 111 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 M0R1W7 72 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 LIME1Q9H400 295 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 LSM4Q9Y4Z0 139 aaKnown RBP4.54□□□□□ -1.68
PTPRB-202ENST00000334414 LOC101059948A0A1B0GTJ6 334 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 IGLC7A0M8Q6 106 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 Q6ZWC4 215 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 ITLN2Q8WWU7 325 aaPredicted RBP4.54□□□□□ -1.68
PTPRB-202ENST00000334414 IGHG2P01859 326 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 CELA2BP08218 269 aaPredicted RBP4.54□□□□□ -1.68
PTPRB-202ENST00000334414 QRFPP83859 136 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 PCOLCEQ15113 449 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 PRIMA1Q86XR5 153 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 GFI1Q99684 422 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 HIGD1BQ9P298 99 aa4.54□□□□□ -1.68
PTPRB-202ENST00000334414 PLXNA3P51805 1871 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 F6UB75 175 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 SYNJ2BPP57105 145 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 RCHY1Q96PM5 261 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 ORMDL1Q9P0S3 153 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 EGR2P11161 476 aaPredicted RBP4.53□□□□□ -1.68
PTPRB-202ENST00000334414 MST1P26927 711 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 TCF15Q12870 199 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 SP7Q8TDD2 431 aaPredicted RBP4.53□□□□□ -1.68
PTPRB-202ENST00000334414 C11orf52Q96A22 123 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 VDAC2P45880 294 aaPredicted RBP4.53□□□□□ -1.68
PTPRB-202ENST00000334414 HERV-K104P63124 156 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 HS3ST6Q96QI5 342 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 CRLF1O75462 422 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 FGF6P10767 208 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 SLX1AQ9BQ83 275 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 C4orf51C9J302 202 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 V9GYV3 84 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 IGHG3P01860 377 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 RNF152Q8N8N0 203 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 SPSB2Q99619 263 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 CHCHD5Q9BSY4 110 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 DEPPQ9NTK1 212 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 CCL21O00585 134 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 CRYGSP22914 178 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 CRYBA4P53673 196 aa4.53□□□□□ -1.68
PTPRB-202ENST00000334414 ATP5EP2Q5VTU8 51 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms