RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ATOH7Q8N100 152 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 TRGV9Q99603 122 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 WNT10AQ9GZT5 417 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 Q9H3A6 140 aa13.89□□□□□ -0.19
COL9A1-201ENST00000320755 VWC2LB2RUY7 222 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 TMEM183BQ1AE95 376 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 OR10J3Q5JRS4 329 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 TMEM116Q8NCL8 245 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 STXBP6Q8NFX7 210 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 HIST1H1EP10412 219 aaKnown RBP13.88□□□□□ -0.19
COL9A1-201ENST00000320755 G0S2P27469 103 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 MMDQ15546 238 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 LBHQ53QV2 105 aaPredicted RBP13.88□□□□□ -0.19
COL9A1-201ENST00000320755 TEX43Q6ZNM6 134 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 EXOC3-AS1Q8N2X6 119 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 TSKUQ8WUA8 353 aa13.88□□□□□ -0.19
COL9A1-201ENST00000320755 F11RQ9Y624 299 aaKnown RBP13.88□□□□□ -0.19
COL9A1-201ENST00000320755 NCOR2Q9Y618 2525 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 TCAPO15273 167 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 ZNF324O75467 553 aaPredicted RBP13.87□□□□□ -0.19
COL9A1-201ENST00000320755 MYCNOSP40205 109 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 COX19Q49B96 90 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 KLF17Q5JT82 389 aaPredicted RBP13.87□□□□□ -0.19
COL9A1-201ENST00000320755 C18orf32Q8TCD1 76 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 MBD6Q96DN6 1003 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 GPR82Q96P67 336 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 HIGD1AQ9Y241 93 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 TEX22C9J3V5 150 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 TIMM23O14925 209 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 SIAH2O43255 324 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 ZNF672Q499Z4 452 aaPredicted RBP13.87□□□□□ -0.19
COL9A1-201ENST00000320755 LDLRAD2Q5SZI1 272 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 Q71RC1 249 aaPredicted RBP13.87□□□□□ -0.19
COL9A1-201ENST00000320755 VKORC1Q9BQB6 163 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 CHD8Q9HCK8 2581 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 CRYGBP07316 175 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 NBL1P41271 181 aa13.87□□□□□ -0.19
COL9A1-201ENST00000320755 A6NNC1 897 aa13.86□□□□□ -0.19
COL9A1-201ENST00000320755 C8orf46Q8TAG6 207 aa13.86□□□□□ -0.19
COL9A1-201ENST00000320755 PGLYRP4Q96LB8 373 aa13.86□□□□□ -0.19
COL9A1-201ENST00000320755 FOXA3P55318 350 aaPredicted RBP13.86□□□□□ -0.19
COL9A1-201ENST00000320755 LCN12Q6JVE5 192 aa13.86□□□□□ -0.19
COL9A1-201ENST00000320755 RNASEKQ6P5S7 137 aaKnown RBP13.86□□□□□ -0.19
COL9A1-201ENST00000320755 FAM231DQ6ZW35 169 aa13.86□□□□□ -0.19
COL9A1-201ENST00000320755 C3orf79P0CE67 100 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 GP9P14770 177 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 NUTF2P61970 127 aaKnown RBP13.85□□□□□ -0.19
COL9A1-201ENST00000320755 HES1Q14469 280 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 SSX8Q7RTT4 187 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 RASL11BQ9BPW5 248 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 K7ENP7 123 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 CCL21O00585 134 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 HSBP1O75506 76 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 SSTP61278 116 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 KLRD1Q13241 179 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 CDSNQ15517 529 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 C5orf17Q8NAS9 161 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 BORCS7Q96B45 105 aa13.85□□□□□ -0.19
COL9A1-201ENST00000320755 DAZAP1Q96EP5 407 aaKnown RBP13.85□□□□□ -0.19
COL9A1-201ENST00000320755 P01737 135 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 TCRAP04437 139 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 IGLC1P0CG04 106 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 GOLT1AQ6ZVE7 132 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 PRNTQ86SH4 94 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 CIARTQ8N365 385 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-201ENST00000320755 TNFRSF14Q92956 283 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 MIEN1Q9BRT3 115 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 M0QZ24 198 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 NIT1Q86X76 327 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 C17orf77Q96MU5 243 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 SLC25A39Q9BZJ4 359 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-201ENST00000320755 HRNRQ86YZ3 2850 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-201ENST00000320755 OR8B3Q8NGG8 313 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 OR8B2Q96RD0 313 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 C7orf69Q9H7B7 122 aa13.84□□□□□ -0.19
COL9A1-201ENST00000320755 RAB4AP20338 218 aa13.83□□□□□ -0.2
COL9A1-201ENST00000320755 Q8N976 141 aa13.83□□□□□ -0.2
COL9A1-201ENST00000320755 C20orf144Q9BQM9 153 aa13.83□□□□□ -0.2
COL9A1-201ENST00000320755 RPP21Q9H633 154 aaKnown RBP13.83□□□□□ -0.2
COL9A1-201ENST00000320755 PMCHL1Q16048 86 aa13.82□□□□□ -0.2
COL9A1-201ENST00000320755 SPATA45Q537H7 98 aa13.82□□□□□ -0.2
COL9A1-201ENST00000320755 MAJINQ3KP22 176 aa13.82□□□□□ -0.2
COL9A1-201ENST00000320755 GTSF1Q8WW33 167 aa13.82□□□□□ -0.2
COL9A1-201ENST00000320755 CHRDL1Q9BU40 450 aa13.82□□□□□ -0.2
COL9A1-201ENST00000320755 KLF12Q9Y4X4 402 aa13.82□□□□□ -0.2
COL9A1-201ENST00000320755 M0R2Z0 102 aa13.82□□□□□ -0.2
COL9A1-201ENST00000320755 IGKV1-17P01599 117 aa13.82□□□□□ -0.2
COL9A1-201ENST00000320755 SH2D7A6NKC9 451 aaPredicted RBP13.81□□□□□ -0.2
COL9A1-201ENST00000320755 I3L2K1 104 aa13.81□□□□□ -0.2
COL9A1-201ENST00000320755 LIPFP07098 398 aa13.81□□□□□ -0.2
COL9A1-201ENST00000320755 COL8A1P27658 744 aa13.81□□□□□ -0.2
COL9A1-201ENST00000320755 ALKBH7Q9BT30 221 aaPredicted RBP13.81□□□□□ -0.2
COL9A1-201ENST00000320755 MLST8Q9BVC4 326 aa13.81□□□□□ -0.2
COL9A1-201ENST00000320755 TOMM40O96008 361 aa13.81□□□□□ -0.2
COL9A1-201ENST00000320755 HTR1DP28221 377 aa13.81□□□□□ -0.2
COL9A1-201ENST00000320755 CA7P43166 264 aa13.81□□□□□ -0.2
COL9A1-201ENST00000320755 FBLN7Q53RD9 439 aa13.81□□□□□ -0.2
COL9A1-201ENST00000320755 A8MWL6 223 aa13.8□□□□□ -0.2
COL9A1-201ENST00000320755 Q56UQ5 140 aa13.8□□□□□ -0.2
COL9A1-201ENST00000320755 WIPF2Q8TF74 440 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms