RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ZNF600Q6ZNG1 722 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 VPS13CQ709C8 3753 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 MDFIC2A0A1B0GVS7 189 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 NBEAP1P0C6P0 100 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 SUMO1P63165 101 aaKnown RBP13.9□□□□□ -0.18
RAB39A-201ENST00000320578 ATP5G2Q06055 141 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 C9orf152Q5JTZ5 239 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 WFDC11Q8NEX6 87 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 S4R3C0 116 aa13.9□□□□□ -0.18
RAB39A-201ENST00000320578 OR2T8A6NH00 312 aa13.89□□□□□ -0.19
RAB39A-201ENST00000320578 IGHV4-59P01825 116 aa13.89□□□□□ -0.19
RAB39A-201ENST00000320578 MT-ND4LP03901 98 aa13.89□□□□□ -0.19
RAB39A-201ENST00000320578 HIST1H1EP10412 219 aaKnown RBP13.89□□□□□ -0.19
RAB39A-201ENST00000320578 ADMP35318 185 aa13.89□□□□□ -0.19
RAB39A-201ENST00000320578 ADIRFQ15847 76 aa13.89□□□□□ -0.19
RAB39A-201ENST00000320578 USMG5Q96IX5 58 aa13.89□□□□□ -0.19
RAB39A-201ENST00000320578 YPEL4Q96NS1 127 aa13.89□□□□□ -0.19
RAB39A-201ENST00000320578 TMA7Q9Y2S6 64 aaKnown RBP13.89□□□□□ -0.19
RAB39A-201ENST00000320578 CD99P14209 185 aa13.88□□□□□ -0.19
RAB39A-201ENST00000320578 BLCAPP62952 87 aa13.88□□□□□ -0.19
RAB39A-201ENST00000320578 LINC01551Q86U37 167 aa13.88□□□□□ -0.19
RAB39A-201ENST00000320578 BPIFA4PQ86YQ2 179 aa13.88□□□□□ -0.19
RAB39A-201ENST00000320578 C2CD4CQ8TF44 421 aa13.88□□□□□ -0.19
RAB39A-201ENST00000320578 ANAPC16Q96DE5 110 aa13.88□□□□□ -0.19
RAB39A-201ENST00000320578 VPREB3Q9UKI3 123 aa13.88□□□□□ -0.19
RAB39A-201ENST00000320578 HELZ2Q9BYK8 2649 aaKnown RBP13.88□□□□□ -0.19
RAB39A-201ENST00000320578 CLDN34H7C241 214 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 CCDC140Q96MF4 163 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 DERL1Q9BUN8 251 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 ELOVL1Q9BW60 279 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 CLEC3BP05452 202 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 CRYBB3P26998 211 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 CFHR3Q02985 330 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 USF2Q15853 346 aaPredicted RBP13.87□□□□□ -0.19
RAB39A-201ENST00000320578 RNF212Q495C1 297 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 ZNF329Q86UD4 541 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 HIST1H2BAQ96A08 127 aa13.87□□□□□ -0.19
RAB39A-201ENST00000320578 TMEM89A2RUT3 159 aa13.86□□□□□ -0.19
RAB39A-201ENST00000320578 HELTA6NFD8 242 aa13.86□□□□□ -0.19
RAB39A-201ENST00000320578 ZNF98A6NK75 572 aa13.86□□□□□ -0.19
RAB39A-201ENST00000320578 TGOLN2O43493 480 aa13.86□□□□□ -0.19
RAB39A-201ENST00000320578 IGLV1-40P01703 118 aa13.86□□□□□ -0.19
RAB39A-201ENST00000320578 IGHV3-23P01764 117 aa13.86□□□□□ -0.19
RAB39A-201ENST00000320578 FOLR2P14207 255 aa13.86□□□□□ -0.19
RAB39A-201ENST00000320578 RPL35P42766 123 aaKnown RBP13.86□□□□□ -0.19
RAB39A-201ENST00000320578 TAS2R60P59551 318 aa13.86□□□□□ -0.19
RAB39A-201ENST00000320578 CREBBPQ92793 2442 aa13.86□□□□□ -0.19
RAB39A-201ENST00000320578 TRBV20OR9-2A0A075B6H5 130 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 BMPR1BO00238 502 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 MRPS12O15235 138 aaKnown RBP13.85□□□□□ -0.19
RAB39A-201ENST00000320578 TRGV3P03979 118 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 GPR183P32249 361 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 RAB9AP51151 201 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 RELQ04864 619 aaPredicted RBP13.85□□□□□ -0.19
RAB39A-201ENST00000320578 LYPD1Q8N2G4 141 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 ZNF414Q96IQ9 312 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 MS4A10Q96PG2 267 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 PPP1R2P9O14990 202 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 OR4F17Q8NGA8 305 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 ISOC2Q96AB3 205 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 RABAC1Q9UI14 185 aa13.85□□□□□ -0.19
RAB39A-201ENST00000320578 IGLC2P0DOY2 106 aa13.84□□□□□ -0.19
RAB39A-201ENST00000320578 LEMD1Q68G75 181 aa13.84□□□□□ -0.19
RAB39A-201ENST00000320578 OTORQ9NRC9 128 aa13.84□□□□□ -0.19
RAB39A-201ENST00000320578 CDC42EP3Q9UKI2 254 aa13.84□□□□□ -0.19
RAB39A-201ENST00000320578 CSPG4Q6UVK1 2322 aa13.84□□□□□ -0.19
RAB39A-201ENST00000320578 A0A0G2JLM5 398 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 S100A9P06702 114 aaKnown RBP13.83□□□□□ -0.2
RAB39A-201ENST00000320578 RANP62826 216 aaKnown RBP13.83□□□□□ -0.2
RAB39A-201ENST00000320578 PDE6HQ13956 83 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 FAM209BQ5JX69 171 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 TOMM20LQ6UXN7 152 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 CLEC19AQ6UXS0 136 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 CIARTQ8N365 385 aaPredicted RBP13.83□□□□□ -0.2
RAB39A-201ENST00000320578 TMEM86BQ8N661 226 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 C5orf17Q8NAS9 161 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 ZFAND3Q9H8U3 227 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 ZNF586Q9NXT0 402 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 LINC00527Q9UJ94 153 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 EPDR1Q9UM22 224 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 TRBV19A0A075B6N1 114 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 PEX7O00628 323 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 RPL7P18124 248 aaKnown RBP13.83□□□□□ -0.2
RAB39A-201ENST00000320578 ELOBQ15370 118 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 Q6ZS46 218 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 FAM24BQ8N5W8 94 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 OCC1Q8TAD7 63 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 BLNKQ8WV28 456 aa13.83□□□□□ -0.2
RAB39A-201ENST00000320578 NOL4LQ96MY1 436 aaPredicted RBP13.83□□□□□ -0.2
RAB39A-201ENST00000320578 PGPA6NDG6 321 aa13.82□□□□□ -0.2
RAB39A-201ENST00000320578 H7BYZ3 331 aa13.82□□□□□ -0.2
RAB39A-201ENST00000320578 GNG4P50150 75 aa13.82□□□□□ -0.2
RAB39A-201ENST00000320578 CNN1P51911 297 aaKnown RBP13.82□□□□□ -0.2
RAB39A-201ENST00000320578 TPPP2P59282 170 aa13.82□□□□□ -0.2
RAB39A-201ENST00000320578 PRSS22Q9GZN4 317 aa13.82□□□□□ -0.2
RAB39A-201ENST00000320578 Q9H3A6 140 aa13.82□□□□□ -0.2
RAB39A-201ENST00000320578 KLF12Q9Y4X4 402 aa13.82□□□□□ -0.2
RAB39A-201ENST00000320578 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.81□□□□□ -0.2
RAB39A-201ENST00000320578 IMMP2LQ96T52 175 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms