RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FTH1P19P0C7X4 201 aa15.25■□□□□ 0.03
RTN4-201ENST00000317610 CD24P25063 80 aa15.25■□□□□ 0.03
RTN4-201ENST00000317610 LRRC10Q5BKY1 277 aa15.25■□□□□ 0.03
RTN4-201ENST00000317610 OTORQ9NRC9 128 aa15.25■□□□□ 0.03
RTN4-201ENST00000317610 IGHV2-70DA0A0C4DH43 119 aa15.25■□□□□ 0.03
RTN4-201ENST00000317610 OVOL3O00110 214 aa15.25■□□□□ 0.03
RTN4-201ENST00000317610 HAX1O00165 279 aa15.25■□□□□ 0.03
RTN4-201ENST00000317610 HOXB4P17483 251 aaPredicted RBP15.25■□□□□ 0.03
RTN4-201ENST00000317610 RPL27AP46776 148 aaKnown RBP15.25■□□□□ 0.03
RTN4-201ENST00000317610 LYPD2Q6UXB3 125 aa15.25■□□□□ 0.03
RTN4-201ENST00000317610 TRBV6-1A0A0K0K1D8 114 aa15.24■□□□□ 0.03
RTN4-201ENST00000317610 LIPFP07098 398 aa15.24■□□□□ 0.03
RTN4-201ENST00000317610 LOXP28300 417 aaPredicted RBP15.24■□□□□ 0.03
RTN4-201ENST00000317610 TMEM155Q4W5P6 130 aa15.24■□□□□ 0.03
RTN4-201ENST00000317610 TMEM14CQ9P0S9 112 aa15.24■□□□□ 0.03
RTN4-201ENST00000317610 Q6ZS92 163 aa15.23■□□□□ 0.03
RTN4-201ENST00000317610 RNASE8Q8TDE3 154 aaKnown RBP15.23■□□□□ 0.03
RTN4-201ENST00000317610 CTSZQ9UBR2 303 aa15.23■□□□□ 0.03
RTN4-201ENST00000317610 IGLV2-11P01706 119 aa15.23■□□□□ 0.03
RTN4-201ENST00000317610 FBLN7Q53RD9 439 aa15.23■□□□□ 0.03
RTN4-201ENST00000317610 PET117Q6UWS5 81 aa15.23■□□□□ 0.03
RTN4-201ENST00000317610 TMEM191AQ9H0A3 160 aa15.23■□□□□ 0.03
RTN4-201ENST00000317610 PLXNB1O43157 2135 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 LOC105371242A0A075B767 164 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 CHEK1O14757 476 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 ASCL5Q7RTU5 278 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 TMEM190Q8WZ59 177 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 HIGD1AQ9Y241 93 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 ZNF835Q9Y2P0 537 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 H3BTX0 84 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 IGHV1-8P0DP01 117 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 RBX1P62877 108 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 IGF2-ASQ6U949 168 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 DEFB124Q8NES8 71 aa15.22■□□□□ 0.03
RTN4-201ENST00000317610 SPAARA0A1B0GVQ0 90 aa15.21■□□□□ 0.03
RTN4-201ENST00000317610 hDV102S1A0JD36 115 aa15.21■□□□□ 0.03
RTN4-201ENST00000317610 ENSAO43768 121 aaKnown RBP15.21■□□□□ 0.03
RTN4-201ENST00000317610 COL8A1P27658 744 aa15.21■□□□□ 0.03
RTN4-201ENST00000317610 KAAG1Q9UBP8 84 aa15.21■□□□□ 0.03
RTN4-201ENST00000317610 PCP4P48539 62 aa15.21■□□□□ 0.02
RTN4-201ENST00000317610 MPV17L2Q567V2 206 aa15.21■□□□□ 0.02
RTN4-201ENST00000317610 CIARTQ8N365 385 aaPredicted RBP15.21■□□□□ 0.02
RTN4-201ENST00000317610 GATD1Q8NB37 220 aa15.21■□□□□ 0.02
RTN4-201ENST00000317610 FAM57AQ8TBR7 257 aa15.21■□□□□ 0.02
RTN4-201ENST00000317610 TP73-AS1Q9UF72 201 aa15.21■□□□□ 0.02
RTN4-201ENST00000317610 F11RQ9Y624 299 aaKnown RBP15.21■□□□□ 0.02
RTN4-201ENST00000317610 HLA-DRB1P01911 266 aa15.2■□□□□ 0.02
RTN4-201ENST00000317610 SLC25A34Q6PIV7 304 aa15.2■□□□□ 0.02
RTN4-201ENST00000317610 MAP1LC3CQ9BXW4 147 aa15.2■□□□□ 0.02
RTN4-201ENST00000317610 SCRT2Q9NQ03 307 aa15.2■□□□□ 0.02
RTN4-201ENST00000317610 SIGLEC9Q9Y336 463 aa15.2■□□□□ 0.02
RTN4-201ENST00000317610 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.2■□□□□ 0.02
RTN4-201ENST00000317610 IGHV3-72A0A0B4J1Y9 119 aa15.2■□□□□ 0.02
RTN4-201ENST00000317610 IGLC1P0CG04 106 aa15.2■□□□□ 0.02
RTN4-201ENST00000317610 TMEM133Q9H2Q1 129 aa15.2■□□□□ 0.02
RTN4-201ENST00000317610 TRAV30A0A087WSZ9 112 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 TRAV8-1A0A0A6YYK1 113 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 IGHV3-21A0A0B4J1V1 117 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 ZNF785A8K8V0 405 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 TEX22C9J3V5 150 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 BVES-AS1Q5T3Y7 98 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 CCL17Q92583 94 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 TNFRSF14Q92956 283 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 SLC25A39Q9BZJ4 359 aaPredicted RBP15.19■□□□□ 0.02
RTN4-201ENST00000317610 MS4A6AQ9H2W1 248 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 HSPB8Q9UJY1 196 aa15.19■□□□□ 0.02
RTN4-201ENST00000317610 PSG1P11464 419 aa15.18■□□□□ 0.02
RTN4-201ENST00000317610 CNTFRP26992 372 aa15.18■□□□□ 0.02
RTN4-201ENST00000317610 RHOGP84095 191 aa15.18■□□□□ 0.02
RTN4-201ENST00000317610 WFDC8Q8IUA0 241 aa15.18■□□□□ 0.02
RTN4-201ENST00000317610 GSX1Q9H4S2 264 aaPredicted RBP15.18■□□□□ 0.02
RTN4-201ENST00000317610 HSBP1L1C9JCN9 74 aa15.18■□□□□ 0.02
RTN4-201ENST00000317610 C16orf97H3BN30 126 aa15.18■□□□□ 0.02
RTN4-201ENST00000317610 TAX1BP3O14907 124 aa15.18■□□□□ 0.02
RTN4-201ENST00000317610 LYZP61626 148 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 BSPH1Q075Z2 132 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 GOLT1AQ6ZVE7 132 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 PRNTQ86SH4 94 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 NEU4Q8WWR8 484 aaPredicted RBP15.17■□□□□ 0.02
RTN4-201ENST00000317610 RBPJQ06330 500 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 LINC01545Q5VT33 79 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 EXOC3-AS1Q8N2X6 119 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 DEFB125Q8N687 156 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 TMUB1Q9BVT8 246 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 ZFHX4Q86UP3 3567 aa15.17■□□□□ 0.02
RTN4-201ENST00000317610 A0A1B0GUT8 65 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 NUDT3O95989 172 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 THBDP07204 575 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 APELAP0DMC3 54 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 ZNF138P52744 262 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 C12orf54Q6X4T0 127 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 Q71RC1 249 aaPredicted RBP15.16■□□□□ 0.02
RTN4-201ENST00000317610 TMEM75Q8N9X5 138 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 I3L2K1 104 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 HTR1DP28221 377 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 RPS20P60866 119 aaKnown RBP15.16■□□□□ 0.02
RTN4-201ENST00000317610 C21orf62-AS1Q17RA5 79 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 OR4C5Q8NGB2 326 aa15.16■□□□□ 0.02
RTN4-201ENST00000317610 IGLV1-47P01700 117 aa15.15■□□□□ 0.02
RTN4-201ENST00000317610 CDKN1BP46527 198 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms