RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 FOXI2Q6ZQN5 318 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 TTC9CQ8N5M4 171 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 OR8A1Q8NGG7 326 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 RNF5Q99942 180 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 HES7Q9BYE0 225 aa3.84□□□□□ -1.79
PTPN13-201ENST00000316707 TIMM8BQ9Y5J9 83 aaPredicted RBP3.84□□□□□ -1.79
PTPN13-201ENST00000316707 IGKV1D-37A0A075B6S9 117 aa3.84□□□□□ -1.8
PTPN13-201ENST00000316707 ABCA7Q8IZY2 2146 aa3.84□□□□□ -1.8
PTPN13-201ENST00000316707 MRPL20Q9BYC9 149 aaKnown RBP3.84□□□□□ -1.8
PTPN13-201ENST00000316707 TNFAIP6P98066 277 aaPredicted RBP3.84□□□□□ -1.8
PTPN13-201ENST00000316707 MORN5Q5VZ52 161 aa3.84□□□□□ -1.8
PTPN13-201ENST00000316707 PVRIGQ6DKI7 326 aa3.84□□□□□ -1.8
PTPN13-201ENST00000316707 GOLT1AQ6ZVE7 132 aa3.84□□□□□ -1.8
PTPN13-201ENST00000316707 SRSF8Q9BRL6 282 aaKnown RBP3.84□□□□□ -1.8
PTPN13-201ENST00000316707 AAMDCQ9H7C9 122 aa3.84□□□□□ -1.8
PTPN13-201ENST00000316707 PSG8Q9UQ74 426 aa3.84□□□□□ -1.8
PTPN13-201ENST00000316707 K7EM74 188 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 SAP30O75446 220 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 HOXB4P17483 251 aaPredicted RBP3.83□□□□□ -1.8
PTPN13-201ENST00000316707 TNRC6AQ8NDV7 1962 aaKnown RBP3.83□□□□□ -1.8
PTPN13-201ENST00000316707 ATP5LO75964 103 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 MYOD1P15172 320 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 MLANAQ16655 118 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 BCL6BQ8N143 479 aaPredicted RBP3.83□□□□□ -1.8
PTPN13-201ENST00000316707 RAB1BQ9H0U4 201 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 PLAUP00749 431 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 GCSHP23434 173 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 RIPPLY3P57055 190 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 TM2D2Q9BX73 214 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 ARMS2P0C7Q2 107 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 BHLHA15Q7RTS1 189 aaPredicted RBP3.83□□□□□ -1.8
PTPN13-201ENST00000316707 OR10W1Q8NGF6 305 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 RASL11BQ9BPW5 248 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 U3KQK5 164 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 KLF17Q5JT82 389 aaPredicted RBP3.83□□□□□ -1.8
PTPN13-201ENST00000316707 TEX36Q5VZQ5 186 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 Q6ZS92 163 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 TRBV19A0A075B6N1 114 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 FSTL3O95633 263 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 CKS2P33552 79 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 NMUP48645 174 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 CCL13Q99616 98 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 SHANK2-AS3Q9BTD1 123 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 MAP1LC3AQ9H492 121 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 NGBQ9NPG2 151 aa3.83□□□□□ -1.8
PTPN13-201ENST00000316707 ZNF71Q9NQZ8 489 aaPredicted RBP3.83□□□□□ -1.8
PTPN13-201ENST00000316707 IGHV1-18A0A0C4DH31 117 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 TMEM238LA0A1B0GVL6 79 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 ZNF138P52744 262 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 DEFB108BQ8NET1 73 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 RND1Q92730 232 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 LEAP2Q969E1 77 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 ZNF479Q96JC4 524 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 SLC25A15Q9Y619 301 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 SLC25A17O43808 307 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 PRSS1P07477 247 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 LHFPL4Q7Z7J7 247 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 GAFA1Q96PS6 74 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 GAGE12HA6NDE8 117 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 LAMTOR5O43504 91 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 AGFG2O95081 481 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 TFF1P04155 84 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 LINC00322Q6ZN03 302 aaPredicted RBP3.82□□□□□ -1.8
PTPN13-201ENST00000316707 C1orf229Q6ZS94 237 aaPredicted RBP3.82□□□□□ -1.8
PTPN13-201ENST00000316707 ASCL5Q7RTU5 278 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 PRNTQ86SH4 94 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 SPRY3O43610 288 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 SNAI2O43623 268 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 NDUFB3O43676 98 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 EVI2AP22794 236 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 FCER1GP30273 86 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 LYZP61626 148 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 FAM216BQ8N7L0 139 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 ZNF502Q8TBZ5 544 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 SGK494Q96LW2 274 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 ATP6V0BQ99437 205 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 SPATA25Q9BR10 227 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 SPRR3Q9UBC9 169 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 HILPDAQ9Y5L2 63 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 IGHV3OR15-7A0A075B7D8 119 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 A0A1W2PPI3 338 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 GNG7O60262 68 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 TCTEX1D4Q5JR98 221 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 RAB37Q96AX2 223 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 CHAC1Q9BUX1 264 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 F11RQ9Y624 299 aaKnown RBP3.82□□□□□ -1.8
PTPN13-201ENST00000316707 KNTC1P50748 2209 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 D6R8Y8 96 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 E9PLD3 99 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 TWIST1Q15672 202 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 LCNL1Q6ZST4 164 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 COX8CQ7Z4L0 72 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 SH3BGRL2Q9UJC5 107 aa3.82□□□□□ -1.8
PTPN13-201ENST00000316707 TEX48A0A1B0GUV7 120 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 C1orf185Q5T7R7 199 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 PPIAL4CA0A0B4J2A2 164 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 PPIAL4GP0DN37 164 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 RAB9AP51151 201 aa3.81□□□□□ -1.8
PTPN13-201ENST00000316707 TPPP3Q9BW30 176 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 226.2 ms