RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 SELENOTP62341 195 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 FHL3Q13643 280 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 GCSAMLQ5JQS6 135 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 LCN15Q6UWW0 184 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 UNQ9165/PRO28630Q6UXU0 137 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 MBD3L1Q8WWY6 194 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 WNK1Q9H4A3 2382 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 MAP1LC3B2A6NCE7 125 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 PSG1P11464 419 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 CDC34P49427 236 aaPredicted RBP17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 SYNJ2BPP57105 145 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 SSX7Q7RTT5 188 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 MAP1LC3BQ9GZQ8 125 aa17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 PUS1Q9Y606 427 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC85B-201ENST00000312579 A0A1W2PPV4 95 aa17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 RD3LP0DJH9 198 aa17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 ZP3P21754 424 aa17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 MYCNOSP40205 109 aa17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 YPEL3P61236 119 aaPredicted RBP17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 TOMM20LQ6UXN7 152 aa17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 ZNF600Q6ZNG1 722 aa17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 EIF4E3Q8N5X7 224 aaKnown RBP17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 SPATA3Q8NHX4 192 aa17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 DLX4Q92988 240 aaPredicted RBP17.15■□□□□ 0.34
CCDC85B-201ENST00000312579 VWFP04275 2813 aa17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 TRAV1-1A0A0B4J248 108 aa17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 ZNF320A2RRD8 509 aa17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 SEC14L6B5MCN3 397 aa17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 TOMM40O96008 361 aa17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 S100A1P23297 94 aa17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 RELQ04864 619 aaPredicted RBP17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 OR4F17Q8NGA8 305 aa17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 RAB24Q969Q5 203 aa17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 OR4F4Q96R69 305 aa17.14■□□□□ 0.33
CCDC85B-201ENST00000312579 ZNF207O43670 478 aaKnown RBP17.13■□□□□ 0.33
CCDC85B-201ENST00000312579 SCGB2A1O75556 95 aa17.13■□□□□ 0.33
CCDC85B-201ENST00000312579 PF4P02776 101 aa17.13■□□□□ 0.33
CCDC85B-201ENST00000312579 RHOBP62745 196 aa17.13■□□□□ 0.33
CCDC85B-201ENST00000312579 KLF5Q13887 457 aaPredicted RBP17.13■□□□□ 0.33
CCDC85B-201ENST00000312579 GPHB5Q86YW7 130 aa17.13■□□□□ 0.33
CCDC85B-201ENST00000312579 C20orf24Q9BUV8 137 aa17.13■□□□□ 0.33
CCDC85B-201ENST00000312579 EIF3GO75821 320 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC85B-201ENST00000312579 FABP1P07148 127 aa17.12■□□□□ 0.33
CCDC85B-201ENST00000312579 EDN2P20800 178 aa17.12■□□□□ 0.33
CCDC85B-201ENST00000312579 FGF8P55075 233 aaPredicted RBP17.12■□□□□ 0.33
CCDC85B-201ENST00000312579 Q8WTZ3 238 aa17.12■□□□□ 0.33
CCDC85B-201ENST00000312579 ZFAND3Q9H8U3 227 aa17.12■□□□□ 0.33
CCDC85B-201ENST00000312579 ANK2Q01484 3957 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 NDUFA4O00483 81 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 HMGB3O15347 200 aaKnown RBP17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 CCL20P78556 96 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 UQCC3Q6UW78 93 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 OR51G1Q8NGK1 321 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 IL4P05112 153 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 LYZP61626 148 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 FAM106AQ4KMX7 169 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 C1QL4Q86Z23 238 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 OR1L4Q8NGR5 311 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 TMEM190Q8WZ59 177 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 FAM210AQ96ND0 272 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 PBDC1Q9BVG4 233 aa17.11■□□□□ 0.33
CCDC85B-201ENST00000312579 M0QZ24 198 aa17.1■□□□□ 0.33
CCDC85B-201ENST00000312579 COX7A2P2O60397 106 aa17.1■□□□□ 0.33
CCDC85B-201ENST00000312579 USF2Q15853 346 aaPredicted RBP17.1■□□□□ 0.33
CCDC85B-201ENST00000312579 TM4SF20Q53R12 229 aa17.1■□□□□ 0.33
CCDC85B-201ENST00000312579 LINC00482Q8N8I6 264 aa17.1■□□□□ 0.33
CCDC85B-201ENST00000312579 PFDN5Q99471 154 aa17.1■□□□□ 0.33
CCDC85B-201ENST00000312579 DOK5Q9P104 306 aa17.1■□□□□ 0.33
CCDC85B-201ENST00000312579 TRRAPQ9Y4A5 3859 aa17.09■□□□□ 0.33
CCDC85B-201ENST00000312579 WI2-2373I1.2A0A1W2PRP0 233 aa17.09■□□□□ 0.33
CCDC85B-201ENST00000312579 GUK1Q16774 197 aa17.09■□□□□ 0.33
CCDC85B-201ENST00000312579 TOR2AQ5JU69 321 aa17.09■□□□□ 0.33
CCDC85B-201ENST00000312579 FAM78BQ5VT40 261 aa17.09■□□□□ 0.33
CCDC85B-201ENST00000312579 GATAD1Q8WUU5 269 aa17.09■□□□□ 0.33
CCDC85B-201ENST00000312579 RNF2Q99496 336 aa17.09■□□□□ 0.33
CCDC85B-201ENST00000312579 TREM1Q9NP99 234 aa17.09■□□□□ 0.33
CCDC85B-201ENST00000312579 FUT9Q9Y231 359 aa17.09■□□□□ 0.33
CCDC85B-201ENST00000312579 IGHV3-49A0A0A0MS15 119 aa17.08■□□□□ 0.32
CCDC85B-201ENST00000312579 OR5G3P0C626 314 aa17.08■□□□□ 0.32
CCDC85B-201ENST00000312579 SPATA31B1PQ5VZV4 182 aa17.08■□□□□ 0.32
CCDC85B-201ENST00000312579 RNF125Q96EQ8 232 aa17.08■□□□□ 0.32
CCDC85B-201ENST00000312579 TMEM231Q9H6L2 316 aa17.08■□□□□ 0.32
CCDC85B-201ENST00000312579 SEPSECSQ9HD40 501 aaKnown RBP17.08■□□□□ 0.32
CCDC85B-201ENST00000312579 DNAJC4Q9NNZ3 241 aa17.08■□□□□ 0.32
CCDC85B-201ENST00000312579 SELENOKQ9Y6D0 94 aa17.08■□□□□ 0.32
CCDC85B-201ENST00000312579 ORM2P19652 201 aa17.07■□□□□ 0.32
CCDC85B-201ENST00000312579 SRSF3P84103 164 aaKnown RBP17.07■□□□□ 0.32
CCDC85B-201ENST00000312579 REC114Q7Z4M0 266 aa17.07■□□□□ 0.32
CCDC85B-201ENST00000312579 IQCF2Q8IXL9 164 aa17.07■□□□□ 0.32
CCDC85B-201ENST00000312579 OR1B1Q8NGR6 318 aa17.07■□□□□ 0.32
CCDC85B-201ENST00000312579 MRPL32Q9BYC8 188 aaKnown RBP17.07■□□□□ 0.32
CCDC85B-201ENST00000312579 EIF5A2Q9GZV4 153 aaKnown RBP17.07■□□□□ 0.32
CCDC85B-201ENST00000312579 DNHD1Q96M86 4753 aa17.07■□□□□ 0.32
CCDC85B-201ENST00000312579 IGHV3OR16-13A0A075B7E8 117 aa17.06■□□□□ 0.32
CCDC85B-201ENST00000312579 IGHV3-74A0A0B4J1X5 117 aa17.06■□□□□ 0.32
CCDC85B-201ENST00000312579 OVOL1O14753 267 aa17.06■□□□□ 0.32
CCDC85B-201ENST00000312579 STAG3L2P0CL84 134 aa17.06■□□□□ 0.32
CCDC85B-201ENST00000312579 STAG3L3P0CL85 134 aa17.06■□□□□ 0.32
CCDC85B-201ENST00000312579 PEA15Q15121 130 aa17.06■□□□□ 0.32
CCDC85B-201ENST00000312579 C10orf113Q5VZT2 155 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms