RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 SGK494Q96LW2 274 aa12.96□□□□□ -0.33
TVP23B-201ENST00000307767 HSPB9Q9BQS6 159 aa12.96□□□□□ -0.33
TVP23B-201ENST00000307767 SHANK2-AS3Q9BTD1 123 aa12.96□□□□□ -0.33
TVP23B-201ENST00000307767 MLST8Q9BVC4 326 aa12.96□□□□□ -0.33
TVP23B-201ENST00000307767 Q9H3A6 140 aa12.96□□□□□ -0.33
TVP23B-201ENST00000307767 TP53TG3Q9ULZ0 132 aa12.96□□□□□ -0.33
TVP23B-201ENST00000307767 SPTAN1Q13813 2472 aaKnown RBP12.96□□□□□ -0.34
TVP23B-201ENST00000307767 H3BRN7 92 aa12.95□□□□□ -0.34
TVP23B-201ENST00000307767 NUPR1O60356 82 aa12.95□□□□□ -0.34
TVP23B-201ENST00000307767 NDUFB8O95169 186 aa12.95□□□□□ -0.34
TVP23B-201ENST00000307767 CA1P00915 261 aaPredicted RBP12.95□□□□□ -0.34
TVP23B-201ENST00000307767 SLC25A5P05141 298 aaKnown RBP12.95□□□□□ -0.34
TVP23B-201ENST00000307767 FAM231DQ6ZW35 169 aa12.95□□□□□ -0.34
TVP23B-201ENST00000307767 PACRGQ96M98 296 aaPredicted RBP12.95□□□□□ -0.34
TVP23B-201ENST00000307767 ZNF48Q96MX3 618 aaPredicted RBP12.95□□□□□ -0.34
TVP23B-201ENST00000307767 COL12A1Q99715 3063 aa12.95□□□□□ -0.34
TVP23B-201ENST00000307767 VPS13CQ709C8 3753 aa12.95□□□□□ -0.34
TVP23B-201ENST00000307767 LINC00322Q6ZN03 302 aaPredicted RBP12.94□□□□□ -0.34
TVP23B-201ENST00000307767 Q71RC1 249 aaPredicted RBP12.94□□□□□ -0.34
TVP23B-201ENST00000307767 C17orf77Q96MU5 243 aa12.94□□□□□ -0.34
TVP23B-201ENST00000307767 LPAR2Q9HBW0 351 aa12.94□□□□□ -0.34
TVP23B-201ENST00000307767 ABCA2Q9BZC7 2435 aa12.94□□□□□ -0.34
TVP23B-201ENST00000307767 CENPVL3A0A0U1RRI6 287 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 TCRAP04437 139 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 FABP1P07148 127 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 HIST1H1EP10412 219 aaKnown RBP12.93□□□□□ -0.34
TVP23B-201ENST00000307767 TCL1AP56279 114 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 LINC00310P59036 64 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 USF2Q15853 346 aaPredicted RBP12.93□□□□□ -0.34
TVP23B-201ENST00000307767 TMEM256Q8N2U0 113 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 C5orf17Q8NAS9 161 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 NUDT10Q8NFP7 164 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 NUDT11Q96G61 164 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 HLA-DRB1P01911 266 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 IGLC2P0DOY2 106 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 IER3P46695 156 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 PAX8Q06710 450 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 RNF125Q96EQ8 232 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 ATG101Q9BSB4 218 aa12.93□□□□□ -0.34
TVP23B-201ENST00000307767 MRPL18Q9H0U6 180 aaKnown RBP12.93□□□□□ -0.34
TVP23B-201ENST00000307767 IGHV4-61A0A0C4DH41 118 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 IGLV2-11P01706 119 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 FAM106CPP0CH98 169 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 SLC35B1P78383 322 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 KLK9Q2XQG4 91 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 EXOC3-AS1Q8N2X6 119 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 KLK9Q9UKQ9 250 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 LINC01548A6NM66 108 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 ZNF785A8K8V0 405 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 LINC00587B1AMM8 73 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 VWC2LB2RUY7 222 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 NPFFO15130 113 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 SPINK4O60575 86 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 IL4P05112 153 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 MFAP4P55083 255 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 TMEM136Q6ZRR5 245 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 TMEM68Q96MH6 324 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 GNB1LQ9BYB4 327 aa12.92□□□□□ -0.34
TVP23B-201ENST00000307767 DOPEY1Q5JWR5 2465 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 TRBV19A0A075B6N1 114 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-201ENST00000307767 OR2J3O76001 311 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 LTAP01374 205 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 GBGT1Q8N5D6 347 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 GPR82Q96P67 336 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 PRDM13Q9H4Q3 707 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 OTORQ9NRC9 128 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 C21orf62Q9NYP8 219 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 USP9XQ93008 2570 aaPredicted RBP12.91□□□□□ -0.34
TVP23B-201ENST00000307767 ACACBO00763 2458 aa12.91□□□□□ -0.34
TVP23B-201ENST00000307767 GRIFINA4D1Z8 144 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 IGHV3-23P01764 117 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 CTSGP08311 255 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 C10orf105Q8TEF2 133 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 RPH3ALQ9UNE2 315 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 FLNCQ14315 2725 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 TRAV30A0A087WSZ9 112 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 SNURFLB1AK76 121 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 GNG7O60262 68 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 SIGLEC15Q6ZMC9 328 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 SERTAD4Q9NUC0 356 aa12.9□□□□□ -0.34
TVP23B-201ENST00000307767 TRAV8-1A0A0A6YYK1 113 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 C19orf71A6NCJ1 209 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 SH2D7A6NKC9 451 aaPredicted RBP12.89□□□□□ -0.35
TVP23B-201ENST00000307767 UBE2G1P62253 170 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 DNLZQ5SXM8 178 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 PIFOQ8TCI5 191 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 SMIM12Q96EX1 92 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 CHRDL1Q9BU40 450 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 PRSS22Q9GZN4 317 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 TRBV9A0A0B4J1U6 114 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 IZUMO1RA6ND01 250 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 F2Z2F3 143 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 GATCO43716 136 aaKnown RBP12.89□□□□□ -0.35
TVP23B-201ENST00000307767 FCGR2BP31994 310 aaPredicted RBP12.89□□□□□ -0.35
TVP23B-201ENST00000307767 JOSD1Q15040 202 aaPredicted RBP12.89□□□□□ -0.35
TVP23B-201ENST00000307767 GDF5OSQ5U4N7 250 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 GRAMD2BQ96HH9 432 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 FMC1Q96HJ9 113 aa12.89□□□□□ -0.35
TVP23B-201ENST00000307767 C1RLQ9NZP8 487 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms