RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 NPIPB5A8MRT5 1133 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 OCIAD2Q56VL3 154 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 LINC01560Q8TB33 94 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 CACNA1EQ15878 2313 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 CNOT1A5YKK6 2376 aaKnown RBP13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 TRAV3A0A0B4J244 114 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 NCR2O95944 276 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 BSPH1Q075Z2 132 aa13.53□□□□□ -0.24
SNAPC4-201ENST00000298532 CD300EQ496F6 205 aaPredicted RBP13.52□□□□□ -0.24
SNAPC4-201ENST00000298532 LYZL1Q6UWQ5 148 aa13.52□□□□□ -0.24
SNAPC4-201ENST00000298532 CST9LQ9H4G1 147 aa13.52□□□□□ -0.24
SNAPC4-201ENST00000298532 ANK1P16157 1881 aa13.52□□□□□ -0.24
SNAPC4-201ENST00000298532 TANC1Q9C0D5 1861 aa13.52□□□□□ -0.24
SNAPC4-201ENST00000298532 LILRA1O75019 489 aa13.52□□□□□ -0.24
SNAPC4-201ENST00000298532 TRGV9Q99603 122 aa13.52□□□□□ -0.24
SNAPC4-201ENST00000298532 PMS2P5A8MQ11 134 aa13.52□□□□□ -0.25
SNAPC4-201ENST00000298532 FOXG1P55316 489 aaPredicted RBP13.52□□□□□ -0.25
SNAPC4-201ENST00000298532 LY6DQ14210 128 aa13.52□□□□□ -0.25
SNAPC4-201ENST00000298532 C10orf55Q5SWW7 151 aa13.52□□□□□ -0.25
SNAPC4-201ENST00000298532 LINC00473A8K010 186 aa13.52□□□□□ -0.25
SNAPC4-201ENST00000298532 NPSP0C0P6 89 aa13.52□□□□□ -0.25
SNAPC4-201ENST00000298532 EXOC3-AS1Q8N2X6 119 aa13.52□□□□□ -0.25
SNAPC4-201ENST00000298532 A0A1B0GUS0 222 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 FNDC10F2Z333 226 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 IGLC2P0DOY2 106 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 IGLC3P0DOY3 106 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 GAGE1Q13065 139 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 PRR31Q5SQ13 230 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 DLX4Q92988 240 aaPredicted RBP13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 SIP14410 1827 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 LRRK1Q38SD2 2015 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 Q6P435 159 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 TNFRSF14Q92956 283 aa13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 SLC25A39Q9BZJ4 359 aaPredicted RBP13.51□□□□□ -0.25
SNAPC4-201ENST00000298532 SMAD7O15105 426 aaKnown RBP13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 CD7P09564 240 aa13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 PRSS33Q8NF86 280 aa13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 NUP37Q8NFH4 326 aa13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 SCRT1Q9BWW7 348 aa13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 RBMY1BA6NDE4 496 aaKnown RBP13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 RBMY1EA6NEQ0 496 aaKnown RBP13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 RBMY1DP0C7P1 496 aaKnown RBP13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 RBMY1A1P0DJD3 496 aaKnown RBP13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 RBMY1CP0DJD4 496 aa13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 FOXL2NBQ6ZUU3 175 aa13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 TMEM167AQ8TBQ9 72 aa13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 C18orf32Q8TCD1 76 aa13.5□□□□□ -0.25
SNAPC4-201ENST00000298532 TRAV12-3A0A0B4J271 114 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 KLF2Q9Y5W3 355 aaPredicted RBP13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 IGHV1-18A0A0C4DH31 117 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 PINLYPA6NC86 204 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 TDGF1P13385 188 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 ZNF138P52744 262 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 YPEL3P61236 119 aaPredicted RBP13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 ITGB1BP1O14713 200 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 ATXN8Q156A1 80 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 K7ENP7 123 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 DSCR9P59020 149 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 DUX3Q96PT4 197 aa13.49□□□□□ -0.25
SNAPC4-201ENST00000298532 TMEM238C9JI98 176 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 TOMM40O96008 361 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 ZC2HC1BQ5TFG8 222 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 TOMM7Q9P0U1 55 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 LHFPL4Q7Z7J7 247 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 GFRA4Q9GZZ7 299 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 RIF1Q5UIP0 2472 aaKnown RBP13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 A0A1B0GWJ7 208 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 PSG3Q16557 428 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 Q6ZWC4 215 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 C1orf147Q96MC9 270 aaPredicted RBP13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 MAJINQ3KP22 176 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 ADAMTSL5Q6ZMM2 481 aa13.48□□□□□ -0.25
SNAPC4-201ENST00000298532 IGHV3OR16-10A0A075B7F0 116 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 IGKV2-40A0A087WW87 121 aaPredicted RBP13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 IGKV2D-40P01614 121 aaPredicted RBP13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 SRSF6Q13247 344 aaKnown RBP13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 PRTN3P24158 256 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 PAX9P55771 341 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 CHAC1Q9BUX1 264 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 CD177Q8N6Q3 437 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 SLC25A15Q9Y619 301 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 FXYD7P58549 80 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 RHOGP84095 191 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 ZNF329Q86UD4 541 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 FAM168AQ92567 244 aa13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 RSPO3Q9BXY4 272 aaPredicted RBP13.47□□□□□ -0.25
SNAPC4-201ENST00000298532 Q6ZS92 163 aa13.46□□□□□ -0.25
SNAPC4-201ENST00000298532 MCRIP2Q9BUT9 160 aaKnown RBP13.46□□□□□ -0.25
SNAPC4-201ENST00000298532 MBNL3Q9NUK0 354 aaKnown RBP13.46□□□□□ -0.25
SNAPC4-201ENST00000298532 C20orf204Q6ZNR8 217 aa13.46□□□□□ -0.25
SNAPC4-201ENST00000298532 LYPD1Q8N2G4 141 aa13.46□□□□□ -0.25
SNAPC4-201ENST00000298532 LIME1Q9H400 295 aa13.46□□□□□ -0.25
SNAPC4-201ENST00000298532 M0R2P5 195 aa13.46□□□□□ -0.26
SNAPC4-201ENST00000298532 MMP23AO75900 390 aa13.46□□□□□ -0.26
SNAPC4-201ENST00000298532 SELLP14151 372 aa13.46□□□□□ -0.26
SNAPC4-201ENST00000298532 FAM231BA6NCW3 169 aa13.46□□□□□ -0.26
SNAPC4-201ENST00000298532 TIMM23O14925 209 aa13.46□□□□□ -0.26
SNAPC4-201ENST00000298532 IGHV1-46P01743 117 aa13.46□□□□□ -0.26
SNAPC4-201ENST00000298532 IGKV1-6A0A0C4DH72 117 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms