RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZNF479Q96JC4 524 aa10.06□□□□□ -0.8
PCF11-201ENST00000298281 CRYBA2P53672 197 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 SPSB3Q6PJ21 355 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 OTORQ9NRC9 128 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 NBR2O15453 112 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 NBL1P41271 181 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 C1QTNF5Q9BXJ0 243 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 NPIPB5A8MRT5 1133 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 GNG5P63218 68 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.05□□□□□ -0.8
PCF11-201ENST00000298281 A0A1W2PR77 199 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 VCYO14598 125 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 PVRIGQ6DKI7 326 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 SCRT1Q9BWW7 348 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 PFN2P35080 140 aa10.05□□□□□ -0.8
PCF11-201ENST00000298281 SBF1O95248 1867 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 F2Z2F3 143 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 RBM3P98179 157 aaKnown RBP10.04□□□□□ -0.8
PCF11-201ENST00000298281 FOXL1Q12952 345 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 RNASE6Q93091 150 aaKnown RBP10.04□□□□□ -0.8
PCF11-201ENST00000298281 CHCHD2Q9Y6H1 151 aaPredicted RBP10.04□□□□□ -0.8
PCF11-201ENST00000298281 A0A087WWC5 75 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 PPBPP02775 128 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 WDYHV1Q96HA8 205 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 UBL5Q9BZL1 73 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 C17orf100A8MU93 164 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 TMEM144Q7Z5S9 345 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
PCF11-201ENST00000298281 IQCF6A8MYZ5 107 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 OR10W1Q8NGF6 305 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 SPXQ9BT56 116 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 SCRT2Q9NQ03 307 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 IGHV2OR16-5A0A0B4J2B6 119 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 C15orf61A6NNL5 157 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 PSPNO60542 156 aa10.04□□□□□ -0.8
PCF11-201ENST00000298281 SBF2Q86WG5 1849 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 LY75O60449 1722 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 FAM201AQ5SY85 155 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 RSPO3Q9BXY4 272 aaPredicted RBP10.03□□□□□ -0.8
PCF11-201ENST00000298281 IZUMO1RA6ND01 250 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 YPEL1O60688 119 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 CRLF1O75462 422 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 LINC01559Q495D7 138 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 PMVKQ15126 192 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 PSME4Q14997 1843 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 IGHG4P01861 327 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 ANKRD39Q53RE8 183 aa10.03□□□□□ -0.8
PCF11-201ENST00000298281 SRRM4A7MD48 611 aaKnown RBP10.02□□□□□ -0.81
PCF11-201ENST00000298281 RNF166Q96A37 237 aaPredicted RBP10.02□□□□□ -0.81
PCF11-201ENST00000298281 MYMXA0A1B0GTQ4 84 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 GREM1O60565 184 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 TRACP01848 142 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 CTSBP07858 339 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 CLPSL2Q6UWE3 100 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 WFDC9Q8NEX5 89 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 CD5P06127 495 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 TEX38Q6PEX7 206 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 PQLC2LA1A4F0 135 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 OVOL1O14753 267 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 APOC4P55056 127 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 SCN10AQ9Y5Y9 1956 aa10.02□□□□□ -0.81
PCF11-201ENST00000298281 PRRC2AP48634 2157 aaKnown RBP10.01□□□□□ -0.81
PCF11-201ENST00000298281 TFF3Q07654 80 aa10.01□□□□□ -0.81
PCF11-201ENST00000298281 PIP4P2Q8N4L2 257 aa10.01□□□□□ -0.81
PCF11-201ENST00000298281 CARHSP1Q9Y2V2 147 aaKnown RBP10.01□□□□□ -0.81
PCF11-201ENST00000298281 RBBP6Q7Z6E9 1792 aaKnown RBP10.01□□□□□ -0.81
PCF11-201ENST00000298281 TAF1LQ8IZX4 1826 aa10.01□□□□□ -0.81
PCF11-201ENST00000298281 IGKV2-40A0A087WW87 121 aaPredicted RBP10.01□□□□□ -0.81
PCF11-201ENST00000298281 IGKV2D-40P01614 121 aaPredicted RBP10.01□□□□□ -0.81
PCF11-201ENST00000298281 GATA2P23769 480 aaPredicted RBP10.01□□□□□ -0.81
PCF11-201ENST00000298281 PRCDQ00LT1 54 aa10.01□□□□□ -0.81
PCF11-201ENST00000298281 RPL18AQ02543 176 aaKnown RBP10.01□□□□□ -0.81
PCF11-201ENST00000298281 TEX22C9J3V5 150 aa10.01□□□□□ -0.81
PCF11-201ENST00000298281 USF3Q68DE3 2245 aa10.01□□□□□ -0.81
PCF11-201ENST00000298281 PSG7Q13046 419 aa10.01□□□□□ -0.81
PCF11-201ENST00000298281 CHAC1Q9BUX1 264 aa10.01□□□□□ -0.81
PCF11-201ENST00000298281 COL24A1Q17RW2 1714 aa10□□□□□ -0.81
PCF11-201ENST00000298281 Q9HAA7 133 aa10□□□□□ -0.81
PCF11-201ENST00000298281 SLC25A16P16260 332 aa10□□□□□ -0.81
PCF11-201ENST00000298281 DSCR9P59020 149 aa10□□□□□ -0.81
PCF11-201ENST00000298281 RIF1Q5UIP0 2472 aaKnown RBP10□□□□□ -0.81
PCF11-201ENST00000298281 RNF125Q96EQ8 232 aa10□□□□□ -0.81
PCF11-201ENST00000298281 C17orf98A8MV24 154 aa10□□□□□ -0.81
PCF11-201ENST00000298281 LINC00271P0C7V0 271 aa10□□□□□ -0.81
PCF11-201ENST00000298281 MPV17L2Q567V2 206 aa10□□□□□ -0.81
PCF11-201ENST00000298281 MIR17HGQ75NE6 70 aa10□□□□□ -0.81
PCF11-201ENST00000298281 GAGE12JA6NER3 117 aa10□□□□□ -0.81
PCF11-201ENST00000298281 TNFSF13O75888 250 aa10□□□□□ -0.81
PCF11-201ENST00000298281 PTPRFP10586 1907 aa10□□□□□ -0.81
PCF11-201ENST00000298281 RPL15P61313 204 aaKnown RBP10□□□□□ -0.81
PCF11-201ENST00000298281 CCL20P78556 96 aa10□□□□□ -0.81
PCF11-201ENST00000298281 NDPQ00604 133 aa10□□□□□ -0.81
PCF11-201ENST00000298281 GAGE1Q13065 139 aa10□□□□□ -0.81
PCF11-201ENST00000298281 GAGE4Q13068 117 aa10□□□□□ -0.81
PCF11-201ENST00000298281 GAGE5Q13069 117 aa10□□□□□ -0.81
PCF11-201ENST00000298281 GAGE6Q13070 117 aa10□□□□□ -0.81
PCF11-201ENST00000298281 ZNF236Q9UL36 1845 aa10□□□□□ -0.81
PCF11-201ENST00000298281 IGLV3-19P01714 112 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms