RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ZNF524Q96C55 264 aa12.58□□□□□ -0.4
SHROOM4-201ENST00000289292 SYS1-DBNDD2H3BUS1 97 aa12.58□□□□□ -0.4
SHROOM4-201ENST00000289292 SVILO95425 2214 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 WDR81Q562E7 1941 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 ZFAND6Q6FIF0 208 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 CDPF1Q6NVV7 123 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 TMEM101Q96IK0 257 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 TRBV7-9A0A0J9YWB2 115 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 RLFQ13129 1914 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 E9PQ18 207 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 KLF17Q5JT82 389 aaPredicted RBP12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 COX6B1P14854 86 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 CYYR1Q96J86 154 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 CYSLTR1Q9Y271 337 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 SMAD7O15105 426 aaKnown RBP12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 COLCA1Q6ZS62 124 aa12.57□□□□□ -0.4
SHROOM4-201ENST00000289292 SH2D1AO60880 128 aa12.56□□□□□ -0.4
SHROOM4-201ENST00000289292 ZNF329Q86UD4 541 aa12.56□□□□□ -0.4
SHROOM4-201ENST00000289292 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
SHROOM4-201ENST00000289292 IGKV1-6A0A0C4DH72 117 aa12.56□□□□□ -0.4
SHROOM4-201ENST00000289292 TMEM42Q69YG0 159 aa12.56□□□□□ -0.4
SHROOM4-201ENST00000289292 H7C1H1 209 aa12.56□□□□□ -0.4
SHROOM4-201ENST00000289292 ZNF726P1Q15940 193 aa12.56□□□□□ -0.4
SHROOM4-201ENST00000289292 MBNL3Q9NUK0 354 aaKnown RBP12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 IGHV3-73A0A0B4J1V6 119 aa12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 LAGE3Q14657 143 aa12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 LIME1Q9H400 295 aa12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 ZFP36L1Q07352 338 aaKnown RBP12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 ADAMTSL5Q6ZMM2 481 aa12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 PHF3Q92576 2039 aaKnown RBP12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 GFRA3O60609 400 aa12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 OR9G4Q8NGQ1 327 aa12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 CST9LQ9H4G1 147 aa12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 PSG3Q16557 428 aa12.55□□□□□ -0.4
SHROOM4-201ENST00000289292 IGHV2-26A0A0B4J1V2 119 aa12.54□□□□□ -0.4
SHROOM4-201ENST00000289292 PAX1P15863 534 aa12.54□□□□□ -0.4
SHROOM4-201ENST00000289292 IFI27P40305 119 aaPredicted RBP12.54□□□□□ -0.4
SHROOM4-201ENST00000289292 H3BRM9 83 aa12.54□□□□□ -0.4
SHROOM4-201ENST00000289292 TCF20Q9UGU0 1960 aaKnown RBP12.54□□□□□ -0.4
SHROOM4-201ENST00000289292 NDPQ00604 133 aa12.54□□□□□ -0.4
SHROOM4-201ENST00000289292 SRRM5B3KS81 715 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 GAGE2BQ13066 116 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 GAGE2EQ4V326 116 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 OCIAD2Q56VL3 154 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 GAGE2DQ9UEU5 116 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 CD28P10747 220 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 ZNF474Q6S9Z5 364 aaPredicted RBP12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 HELZP42694 1942 aaKnown RBP12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 H0YJW9 148 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 SLC50A1Q9BRV3 221 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 MED12Q93074 2177 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 IGHV2-5P01817 119 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 B3GALT5-AS1P59052 145 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 STPG4Q8N801 248 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 UCNP55089 124 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 SIGLEC15Q6ZMC9 328 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 SLC25A2Q9BXI2 301 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 PGPEP1Q9NXJ5 209 aa12.53□□□□□ -0.4
SHROOM4-201ENST00000289292 IGKV1D-17A0A075B6S4 117 aa12.52□□□□□ -0.4
SHROOM4-201ENST00000289292 FAM231BA6NCW3 169 aa12.52□□□□□ -0.4
SHROOM4-201ENST00000289292 AMN1Q8IY45 258 aa12.52□□□□□ -0.4
SHROOM4-201ENST00000289292 NPFFR1Q9GZQ6 430 aa12.52□□□□□ -0.4
SHROOM4-201ENST00000289292 TRAV21A0A0B4J279 112 aa12.52□□□□□ -0.4
SHROOM4-201ENST00000289292 CNTFRP26992 372 aa12.52□□□□□ -0.4
SHROOM4-201ENST00000289292 PAX9P55771 341 aa12.52□□□□□ -0.4
SHROOM4-201ENST00000289292 PSMG4Q5JS54 123 aa12.52□□□□□ -0.4
SHROOM4-201ENST00000289292 WNT2P09544 360 aa12.52□□□□□ -0.41
SHROOM4-201ENST00000289292 SLC25A48Q6ZT89 311 aaKnown RBP12.52□□□□□ -0.41
SHROOM4-201ENST00000289292 MRPL52Q86TS9 123 aaKnown RBP12.52□□□□□ -0.41
SHROOM4-201ENST00000289292 TMEM219Q86XT9 240 aa12.52□□□□□ -0.41
SHROOM4-201ENST00000289292 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
SHROOM4-201ENST00000289292 Q6ZWC4 215 aa12.52□□□□□ -0.41
SHROOM4-201ENST00000289292 GAFA1Q96PS6 74 aa12.52□□□□□ -0.41
SHROOM4-201ENST00000289292 C11orf68Q9H3H3 251 aaKnown RBP12.52□□□□□ -0.41
SHROOM4-201ENST00000289292 IGHV1-3A0A0C4DH29 117 aa12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 C7orf69Q9H7B7 122 aa12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 ERCC8Q13216 396 aa12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 ERG28Q9UKR5 140 aa12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 SPINK8P0C7L1 97 aa12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 ORMDL2Q53FV1 153 aa12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 C10orf91Q5T1B1 145 aa12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 NEU4Q8WWR8 484 aaPredicted RBP12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 IGHV1-8P0DP01 117 aa12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 SRSF6Q13247 344 aaKnown RBP12.51□□□□□ -0.41
SHROOM4-201ENST00000289292 RASL11AQ6T310 242 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 RNF182Q8N6D2 247 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 TMEM158Q8WZ71 300 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 NTN3O00634 580 aaPredicted RBP12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 CD5LO43866 347 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 PPBPP02775 128 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 MRPL27Q9P0M9 148 aaKnown RBP12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 NLRC5Q86WI3 1866 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 SDK2Q58EX2 2172 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 PFN1P07737 140 aaKnown RBP12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 TDGF1P13385 188 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 PRSS57Q6UWY2 283 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 TRBV6-6A0A0A6YYG2 114 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 F2Z2F3 143 aa12.5□□□□□ -0.41
SHROOM4-201ENST00000289292 FNDC1Q4ZHG4 1894 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms