RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 C10orf105Q8TEF2 133 aa14.13□□□□□ -0.15
CAPN1-201ENST00000279247 MS4A10Q96PG2 267 aa14.13□□□□□ -0.15
CAPN1-201ENST00000279247 CA1P00915 261 aaPredicted RBP14.13□□□□□ -0.15
CAPN1-201ENST00000279247 IGHV4-38-2P0DP08 117 aa14.12□□□□□ -0.15
CAPN1-201ENST00000279247 PVRIGQ6DKI7 326 aa14.12□□□□□ -0.15
CAPN1-201ENST00000279247 Q8N6K4 173 aa14.12□□□□□ -0.15
CAPN1-201ENST00000279247 SLC25A39Q9BZJ4 359 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-201ENST00000279247 ATP6V0E1O15342 81 aa14.12□□□□□ -0.15
CAPN1-201ENST00000279247 FCGR2BP31994 310 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-201ENST00000279247 ZNF600Q6ZNG1 722 aa14.12□□□□□ -0.15
CAPN1-201ENST00000279247 ZNF329Q86UD4 541 aa14.12□□□□□ -0.15
CAPN1-201ENST00000279247 ASCL2Q99929 193 aa14.12□□□□□ -0.15
CAPN1-201ENST00000279247 TBL2Q9Y4P3 447 aaKnown RBP14.12□□□□□ -0.15
CAPN1-201ENST00000279247 UBE2CO00762 179 aa14.12□□□□□ -0.15
CAPN1-201ENST00000279247 ISLRO14498 428 aa14.12□□□□□ -0.15
CAPN1-201ENST00000279247 CREBBPQ92793 2442 aa14.11□□□□□ -0.15
CAPN1-201ENST00000279247 OOSP1A8MZH6 123 aa14.11□□□□□ -0.15
CAPN1-201ENST00000279247 FRMD6-AS1P0C7T7 363 aa14.11□□□□□ -0.15
CAPN1-201ENST00000279247 EXOC3-AS1Q8N2X6 119 aa14.11□□□□□ -0.15
CAPN1-201ENST00000279247 C17orf77Q96MU5 243 aa14.11□□□□□ -0.15
CAPN1-201ENST00000279247 C7orf69Q9H7B7 122 aa14.11□□□□□ -0.15
CAPN1-201ENST00000279247 C1RLQ9NZP8 487 aa14.11□□□□□ -0.15
CAPN1-201ENST00000279247 PEX7O00628 323 aa14.11□□□□□ -0.15
CAPN1-201ENST00000279247 SRD5A3Q9H8P0 318 aa14.11□□□□□ -0.15
CAPN1-201ENST00000279247 ITPR2Q14571 2701 aa14.1□□□□□ -0.15
CAPN1-201ENST00000279247 CNN1P51911 297 aaKnown RBP14.1□□□□□ -0.15
CAPN1-201ENST00000279247 GPR61Q9BZJ8 451 aa14.1□□□□□ -0.15
CAPN1-201ENST00000279247 FBXL7Q9UJT9 491 aa14.1□□□□□ -0.15
CAPN1-201ENST00000279247 IGLV11-55A0A075B6I3 123 aa14.1□□□□□ -0.15
CAPN1-201ENST00000279247 EGR2P11161 476 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-201ENST00000279247 COX6B1P14854 86 aa14.1□□□□□ -0.15
CAPN1-201ENST00000279247 C21orf62Q9NYP8 219 aa14.1□□□□□ -0.15
CAPN1-201ENST00000279247 SRP14P37108 136 aaKnown RBP14.09□□□□□ -0.15
CAPN1-201ENST00000279247 BAGE2Q86Y30 109 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 RNF125Q96EQ8 232 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 OR8I2Q8N0Y5 310 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 NOTCH2Q04721 2471 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 TRAV8-1A0A0A6YYK1 113 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 ZNF98A6NK75 572 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 C9JCJ5 164 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 GP9P14770 177 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 MFAP4P55083 255 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 UBE2G1P62253 170 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 Q9H3A6 140 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 GNB4Q9HAV0 340 aa14.09□□□□□ -0.15
CAPN1-201ENST00000279247 PPP1R2P9O14990 202 aa14.08□□□□□ -0.16
CAPN1-201ENST00000279247 GGCTO75223 188 aaKnown RBP14.08□□□□□ -0.16
CAPN1-201ENST00000279247 EBI3Q14213 229 aa14.08□□□□□ -0.16
CAPN1-201ENST00000279247 USF2Q15853 346 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-201ENST00000279247 ZNF491Q8N8L2 437 aa14.08□□□□□ -0.16
CAPN1-201ENST00000279247 IMMP2LQ96T52 175 aa14.08□□□□□ -0.16
CAPN1-201ENST00000279247 KLF2Q9Y5W3 355 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-201ENST00000279247 SONP18583 2426 aaKnown RBP14.08□□□□□ -0.16
CAPN1-201ENST00000279247 HIST1H1BP16401 226 aaKnown RBP14.08□□□□□ -0.16
CAPN1-201ENST00000279247 PRR31Q5SQ13 230 aa14.08□□□□□ -0.16
CAPN1-201ENST00000279247 SRSF8Q9BRL6 282 aaKnown RBP14.08□□□□□ -0.16
CAPN1-201ENST00000279247 HIF1ANQ9NWT6 349 aa14.08□□□□□ -0.16
CAPN1-201ENST00000279247 ZNF586Q9NXT0 402 aa14.08□□□□□ -0.16
CAPN1-201ENST00000279247 GPR183P32249 361 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 PAX8Q06710 450 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 STXBP6Q8NFX7 210 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 PYGO2Q9BRQ0 406 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 IGHV3OR16-13A0A075B7E8 117 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 IGHV3-74A0A0B4J1X5 117 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 IGHV1-69DA0A0B4J2H0 117 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 NPIPB5A8MRT5 1133 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 IGHV1-69P01742 117 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 CD99P14209 185 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 CBLN1P23435 193 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 MEOX2P50222 304 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 C15orf32Q32M92 178 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 IBA57Q5T440 356 aaKnown RBP14.07□□□□□ -0.16
CAPN1-201ENST00000279247 CHRDL1Q9BU40 450 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 TRAPPC1Q9Y5R8 145 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 ARL2-SNX15V9GYD0 113 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 ZNF705GA8MUZ8 300 aaPredicted RBP14.07□□□□□ -0.16
CAPN1-201ENST00000279247 NDUFS6O75380 124 aaKnown RBP14.07□□□□□ -0.16
CAPN1-201ENST00000279247 IGLV2-8P01709 118 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 TTC9CQ8N5M4 171 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 THYN1Q9P016 225 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 EPDR1Q9UM22 224 aa14.07□□□□□ -0.16
CAPN1-201ENST00000279247 IFITM10A6NMD0 228 aa14.06□□□□□ -0.16
CAPN1-201ENST00000279247 S100A9P06702 114 aaKnown RBP14.06□□□□□ -0.16
CAPN1-201ENST00000279247 Q71RC1 249 aaPredicted RBP14.06□□□□□ -0.16
CAPN1-201ENST00000279247 SPOCK3Q9BQ16 436 aa14.06□□□□□ -0.16
CAPN1-201ENST00000279247 A0A1B0GUS0 222 aa14.06□□□□□ -0.16
CAPN1-201ENST00000279247 HOXA5P20719 270 aa14.06□□□□□ -0.16
CAPN1-201ENST00000279247 RHOGP84095 191 aa14.06□□□□□ -0.16
CAPN1-201ENST00000279247 OR1L6Q8NGR2 347 aa14.06□□□□□ -0.16
CAPN1-201ENST00000279247 IGF2BP2-AS1Q96M15 143 aa14.06□□□□□ -0.16
CAPN1-201ENST00000279247 V9GYV3 84 aa14.06□□□□□ -0.16
CAPN1-201ENST00000279247 F8W735 103 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-201ENST00000279247 FABP4P15090 132 aa14.05□□□□□ -0.16
CAPN1-201ENST00000279247 IL36BQ9NZH7 164 aa14.05□□□□□ -0.16
CAPN1-201ENST00000279247 IGHV3-66A0A0C4DH42 116 aa14.05□□□□□ -0.16
CAPN1-201ENST00000279247 MSMBP08118 114 aa14.05□□□□□ -0.16
CAPN1-201ENST00000279247 RAB4BP61018 213 aa14.05□□□□□ -0.16
CAPN1-201ENST00000279247 RPEL1Q2QD12 228 aa14.05□□□□□ -0.16
CAPN1-201ENST00000279247 MRPL54Q6P161 138 aaKnown RBP14.05□□□□□ -0.16
CAPN1-201ENST00000279247 MRPL27Q9P0M9 148 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms