RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 BRI3O95415 125 aa17.19■□□□□ 0.34
CCDC7-201ENST00000277657 ADMP35318 185 aa17.19■□□□□ 0.34
CCDC7-201ENST00000277657 FOXC2Q99958 501 aa17.19■□□□□ 0.34
CCDC7-201ENST00000277657 SHANK2-AS3Q9BTD1 123 aa17.19■□□□□ 0.34
CCDC7-201ENST00000277657 PPIFP30405 207 aaKnown RBP17.18■□□□□ 0.34
CCDC7-201ENST00000277657 RPL23P62829 140 aaKnown RBP17.18■□□□□ 0.34
CCDC7-201ENST00000277657 LEMD1Q68G75 181 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 Q6ZS46 218 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 CHRDL1Q9BU40 450 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 TMEM14CQ9P0S9 112 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 MXRA5Q9NR99 2828 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 H3BRN7 92 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 Q6YL49 198 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 CCDC140Q96MF4 163 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 MS4A10Q96PG2 267 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 PRDM13Q9H4Q3 707 aa17.18■□□□□ 0.34
CCDC7-201ENST00000277657 GAR1Q9NY12 217 aaKnown RBP17.18■□□□□ 0.34
CCDC7-201ENST00000277657 CCDC168Q8NDH2 2452 aa17.17■□□□□ 0.34
CCDC7-201ENST00000277657 FAM223BA6NKX1 122 aa17.17■□□□□ 0.34
CCDC7-201ENST00000277657 COLCA2A8K830 154 aa17.17■□□□□ 0.34
CCDC7-201ENST00000277657 SUMO1P63165 101 aaKnown RBP17.17■□□□□ 0.34
CCDC7-201ENST00000277657 USF2Q15853 346 aaPredicted RBP17.17■□□□□ 0.34
CCDC7-201ENST00000277657 FAM223AQ8IWN6 122 aa17.17■□□□□ 0.34
CCDC7-201ENST00000277657 C15orf54Q8N8G6 183 aa17.17■□□□□ 0.34
CCDC7-201ENST00000277657 EEF1AKMT3Q96AZ1 226 aa17.17■□□□□ 0.34
CCDC7-201ENST00000277657 ZNF580Q9UK33 172 aa17.17■□□□□ 0.34
CCDC7-201ENST00000277657 TRBV7-1A0A0A6YYK4 115 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 AP4M1O00189 453 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 ADIRFQ15847 76 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 ZNF414Q96IQ9 312 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 ATP6V0BQ99437 205 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 TRBV20OR9-2A0A075B6H5 130 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 H3BUA1 57 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 CLEC3BP05452 202 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 GPR183P32249 361 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 ISOC2Q96AB3 205 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 NOL4LQ96MY1 436 aaPredicted RBP17.16■□□□□ 0.34
CCDC7-201ENST00000277657 TMEM242Q9NWH2 141 aa17.16■□□□□ 0.34
CCDC7-201ENST00000277657 NBEAP1P0C6P0 100 aa17.15■□□□□ 0.34
CCDC7-201ENST00000277657 CRYBB3P26998 211 aa17.15■□□□□ 0.34
CCDC7-201ENST00000277657 MYCNOSP40205 109 aa17.15■□□□□ 0.34
CCDC7-201ENST00000277657 ATP5G2Q06055 141 aa17.15■□□□□ 0.34
CCDC7-201ENST00000277657 ZNF600Q6ZNG1 722 aa17.15■□□□□ 0.34
CCDC7-201ENST00000277657 S100A7AQ86SG5 101 aa17.15■□□□□ 0.34
CCDC7-201ENST00000277657 ELOVL1Q9BW60 279 aa17.15■□□□□ 0.34
CCDC7-201ENST00000277657 VPREB3Q9UKI3 123 aa17.15■□□□□ 0.34
CCDC7-201ENST00000277657 AKAP9Q99996 3911 aa17.15■□□□□ 0.34
CCDC7-201ENST00000277657 LINC01551Q86U37 167 aa17.14■□□□□ 0.33
CCDC7-201ENST00000277657 C2CD4CQ8TF44 421 aa17.14■□□□□ 0.33
CCDC7-201ENST00000277657 YPEL4Q96NS1 127 aa17.14■□□□□ 0.33
CCDC7-201ENST00000277657 CXorf65A6NEN9 183 aa17.14■□□□□ 0.33
CCDC7-201ENST00000277657 ZNF329Q86UD4 541 aa17.14■□□□□ 0.33
CCDC7-201ENST00000277657 TRGV3P03979 118 aa17.13■□□□□ 0.33
CCDC7-201ENST00000277657 RPL35P42766 123 aaKnown RBP17.13■□□□□ 0.33
CCDC7-201ENST00000277657 RNF212Q495C1 297 aa17.13■□□□□ 0.33
CCDC7-201ENST00000277657 TCEAL7Q9BRU2 100 aa17.13■□□□□ 0.33
CCDC7-201ENST00000277657 PRELID1Q9Y255 219 aa17.13■□□□□ 0.33
CCDC7-201ENST00000277657 ZNF98A6NK75 572 aa17.12■□□□□ 0.33
CCDC7-201ENST00000277657 C9JCJ5 164 aa17.12■□□□□ 0.33
CCDC7-201ENST00000277657 SMAD7O15105 426 aaKnown RBP17.12■□□□□ 0.33
CCDC7-201ENST00000277657 HIST1H1EP10412 219 aaKnown RBP17.12■□□□□ 0.33
CCDC7-201ENST00000277657 CFHR3Q02985 330 aa17.12■□□□□ 0.33
CCDC7-201ENST00000277657 CLEC19AQ6UXS0 136 aa17.12■□□□□ 0.33
CCDC7-201ENST00000277657 BLNKQ8WV28 456 aa17.12■□□□□ 0.33
CCDC7-201ENST00000277657 CTDSP1Q9GZU7 261 aa17.12■□□□□ 0.33
CCDC7-201ENST00000277657 FLNAP21333 2647 aaKnown RBP17.12■□□□□ 0.33
CCDC7-201ENST00000277657 TGOLN2O43493 480 aa17.12■□□□□ 0.33
CCDC7-201ENST00000277657 IGLV1-40P01703 118 aa17.12■□□□□ 0.33
CCDC7-201ENST00000277657 SNRPCP09234 159 aaKnown RBP17.12■□□□□ 0.33
CCDC7-201ENST00000277657 BPIFA4PQ86YQ2 179 aa17.12■□□□□ 0.33
CCDC7-201ENST00000277657 MRPS12O15235 138 aaKnown RBP17.11■□□□□ 0.33
CCDC7-201ENST00000277657 MT-ND4LP03901 98 aa17.11■□□□□ 0.33
CCDC7-201ENST00000277657 RANP62826 216 aaKnown RBP17.11■□□□□ 0.33
CCDC7-201ENST00000277657 TEX29Q8N6K0 151 aa17.11■□□□□ 0.33
CCDC7-201ENST00000277657 HIST1H2BAQ96A08 127 aa17.11■□□□□ 0.33
CCDC7-201ENST00000277657 TOMM20LQ6UXN7 152 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 USMG5Q96IX5 58 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 ZFAND3Q9H8U3 227 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 ZNF586Q9NXT0 402 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 LY96Q9Y6Y9 160 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 HELTA6NFD8 242 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 PGPEP1LA6NFU8 196 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 IGLC2P0DOY2 106 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 TPPP2P59282 170 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 FAM24BQ8N5W8 94 aa17.1■□□□□ 0.33
CCDC7-201ENST00000277657 CLDN34H7C241 214 aa17.09■□□□□ 0.33
CCDC7-201ENST00000277657 BMPR1BO00238 502 aa17.09■□□□□ 0.33
CCDC7-201ENST00000277657 HOXA3O43365 443 aaPredicted RBP17.09■□□□□ 0.33
CCDC7-201ENST00000277657 OCC1Q8TAD7 63 aa17.09■□□□□ 0.33
CCDC7-201ENST00000277657 RABAC1Q9UI14 185 aa17.09■□□□□ 0.33
CCDC7-201ENST00000277657 RNF24Q9Y225 148 aa17.09■□□□□ 0.33
CCDC7-201ENST00000277657 KRTAP1-1Q07627 177 aa17.08■□□□□ 0.33
CCDC7-201ENST00000277657 OR4F17Q8NGA8 305 aa17.07■□□□□ 0.32
CCDC7-201ENST00000277657 ANAPC16Q96DE5 110 aa17.07■□□□□ 0.32
CCDC7-201ENST00000277657 KLK15Q9H2R5 256 aa17.07■□□□□ 0.32
CCDC7-201ENST00000277657 Q9H3A6 140 aa17.07■□□□□ 0.32
CCDC7-201ENST00000277657 AURKAIP1Q9NWT8 199 aaPredicted RBP17.07■□□□□ 0.32
CCDC7-201ENST00000277657 IGHV3-35A0A0C4DH35 117 aa17.07■□□□□ 0.32
CCDC7-201ENST00000277657 PGPA6NDG6 321 aa17.07■□□□□ 0.32
CCDC7-201ENST00000277657 H3BTX0 84 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms