RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 TANC2Q9HCD6 1990 aa12.69□□□□□ -0.38
CTDSP1-201ENST00000273062 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
CTDSP1-201ENST00000273062 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
CTDSP1-201ENST00000273062 TM2D2Q9BX73 214 aa12.69□□□□□ -0.38
CTDSP1-201ENST00000273062 HIF1ANQ9NWT6 349 aa12.69□□□□□ -0.38
CTDSP1-201ENST00000273062 UFC1Q9Y3C8 167 aa12.69□□□□□ -0.38
CTDSP1-201ENST00000273062 AMMECR1Q9Y4X0 333 aaPredicted RBP12.69□□□□□ -0.38
CTDSP1-201ENST00000273062 AP5S1Q9NUS5 200 aa12.69□□□□□ -0.38
CTDSP1-201ENST00000273062 WT1P19544 449 aaPredicted RBP12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 TTC9CQ8N5M4 171 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 HINT2Q9BX68 163 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 TEX50A0A1B0GTY4 177 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 C12orf77C9JDV5 145 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 PYYP10082 97 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 ZNF766Q5HY98 468 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 Q6ZUT4 128 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 ANAPC13Q9BS18 74 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 PRDM14Q9GZV8 571 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 HCFC1P51610 2035 aa12.68□□□□□ -0.38
CTDSP1-201ENST00000273062 E9PLD3 99 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 TFF1P04155 84 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 MYOD1P15172 320 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 RPL32P62910 135 aaKnown RBP12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 GAGE5Q13069 117 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 GAGE6Q13070 117 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 DSPP15924 2871 aaKnown RBP12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 IGKV2D-26A0A0A0MRZ7 120 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 A0A1B0GW15 77 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 FAM90A27PA6NNH2 459 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 ODF1Q14990 250 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 MOB1BQ7L9L4 216 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 PIP4P1Q86T03 277 aa12.67□□□□□ -0.38
CTDSP1-201ENST00000273062 DYSFO75923 2080 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 FCGR3BO75015 233 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 CCL11P51671 97 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 UBE2L3P68036 154 aaKnown RBP12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 DPF1Q92782 380 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 TCRBV4S1A1TA0A5B7 111 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 VSTM5A8MXK1 200 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 IGLL5B9A064 214 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 APOMO95445 188 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 CT45A6P0DMU7 189 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 CT45A5P0DMU8 189 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 CT45A7P0DMV0 189 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 GAGE13Q4V321 117 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 CT45A1Q5HYN5 189 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 Q71RC1 249 aaPredicted RBP12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 LINC00596Q86U02 117 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 NFE4Q86UQ8 179 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 CT45A3Q8NHU0 189 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 SIGLEC8Q9NYZ4 499 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 CYSLTR1Q9Y271 337 aa12.66□□□□□ -0.38
CTDSP1-201ENST00000273062 A0A1B0GWB2 263 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 PEX7O00628 323 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 PRRG2O14669 202 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 C1QTNF4Q9BXJ3 329 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 TRGV5A0A0B4J1U4 118 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 NPIPB6E9PJ23 425 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 PROP1O75360 226 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 GPR12P47775 334 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 MLANAQ16655 118 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 FDCSPQ8NFU4 85 aa12.65□□□□□ -0.38
CTDSP1-201ENST00000273062 ZNF318Q5VUA4 2279 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 PSPNO60542 156 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 WFDC3Q8IUB2 231 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 TMEM178AQ8NBL3 297 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 ZBTB34Q8NCN2 500 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 RFESDQ8TAC1 157 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 COL25A1Q9BXS0 654 aaPredicted RBP12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 RPP21Q9H633 154 aaKnown RBP12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 TCF19Q9Y242 345 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 FOXF2Q12947 444 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 FOXI1Q12951 378 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 LCNL1Q6ZST4 164 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 ZNF329Q86UD4 541 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 FAM167A-AS1Q96KT0 104 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 SLC25A2Q9BXI2 301 aa12.64□□□□□ -0.39
CTDSP1-201ENST00000273062 NHLRC4P0CG21 123 aaPredicted RBP12.63□□□□□ -0.39
CTDSP1-201ENST00000273062 DUTP33316 252 aaKnown RBP12.63□□□□□ -0.39
CTDSP1-201ENST00000273062 IFI27P40305 119 aaPredicted RBP12.63□□□□□ -0.39
CTDSP1-201ENST00000273062 SLC25A33Q9BSK2 321 aa12.63□□□□□ -0.39
CTDSP1-201ENST00000273062 CHAC1Q9BUX1 264 aa12.63□□□□□ -0.39
CTDSP1-201ENST00000273062 DKK2Q9UBU2 259 aa12.63□□□□□ -0.39
CTDSP1-201ENST00000273062 ZNF146Q15072 292 aa12.63□□□□□ -0.39
CTDSP1-201ENST00000273062 RALYQ9UKM9 306 aaKnown RBP12.63□□□□□ -0.39
CTDSP1-201ENST00000273062 LOC389332A0A1B0GUA5 103 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 PRSS29PA6NIE9 313 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 LINC01548A6NM66 108 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 IGHV3-13P01766 116 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 ID1P41134 155 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 MDP1Q86V88 176 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 OR9G1Q8NH87 305 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 ZFHX2Q9C0A1 2572 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 CLEC3BP05452 202 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 CSN1S1P47710 185 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 KLRD1Q13241 179 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 ZNF292O60281 2723 aa12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 RIF1Q5UIP0 2472 aaKnown RBP12.62□□□□□ -0.39
CTDSP1-201ENST00000273062 SS18L1O75177 396 aaPredicted RBP12.61□□□□□ -0.39
CTDSP1-201ENST00000273062 C8orf88P0DMB2 117 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms