RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 DKK4Q9UBT3 224 aa13.19□□□□□ -0.3
UBR3-201ENST00000272793 IRF3Q14653 427 aa13.19□□□□□ -0.3
UBR3-201ENST00000272793 C4orf48Q5BLP8 95 aa13.19□□□□□ -0.3
UBR3-201ENST00000272793 SMPXQ9UHP9 88 aa13.19□□□□□ -0.3
UBR3-201ENST00000272793 PRR31Q5SQ13 230 aa13.19□□□□□ -0.3
UBR3-201ENST00000272793 UCNP55089 124 aa13.19□□□□□ -0.3
UBR3-201ENST00000272793 PLA2G2FQ9BZM2 168 aa13.19□□□□□ -0.3
UBR3-201ENST00000272793 LRP6O75581 1613 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 U3KQE9 123 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 A0A1B0GWJ7 208 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 ACYP1P07311 99 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 CFHR3Q02985 330 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 PLXNB3Q9ULL4 1909 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 PROP1O75360 226 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 RPP25Q9BUL9 199 aaKnown RBP13.18□□□□□ -0.3
UBR3-201ENST00000272793 EFEMP2O95967 443 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 PAX8Q06710 450 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 NBASA2RRP1 2371 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 A0A087WWC5 75 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 TM4SF4P48230 202 aa13.18□□□□□ -0.3
UBR3-201ENST00000272793 C8orf82Q6P1X6 216 aaPredicted RBP13.17□□□□□ -0.3
UBR3-201ENST00000272793 A0A1W2PQD3 144 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
UBR3-201ENST00000272793 SPAARA0A1B0GVQ0 90 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 LINC01549A6NIU2 74 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 B9A039 149 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 TIMM17AQ99595 171 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 WFDC6Q9BQY6 131 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 DTX4Q9Y2E6 619 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 C1QL4Q86Z23 238 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 AQP3Q92482 292 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 DEFB130BP0DP73 79 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 DEFB130AP0DP74 79 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 NOVP48745 357 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 FGF11Q92914 225 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 SPG11Q96JI7 2443 aa13.17□□□□□ -0.3
UBR3-201ENST00000272793 IGHV4-4A0A075B6R2 117 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 UPK2O00526 184 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 TMEM187Q14656 261 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 TMEM243Q9BU79 118 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 SRRM4A7MD48 611 aaKnown RBP13.16□□□□□ -0.3
UBR3-201ENST00000272793 FGF6P10767 208 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 RHOGP84095 191 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 PRR19A6NJB7 356 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 UTF1Q5T230 341 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 FAM27BQ5VT28 67 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 NEU4Q8WWR8 484 aaPredicted RBP13.16□□□□□ -0.3
UBR3-201ENST00000272793 SLC25A28Q96A46 364 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 CEACAM1P13688 526 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
UBR3-201ENST00000272793 PSG8Q9UQ74 426 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 CRYBA2P53672 197 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 DUSP15Q9H1R2 295 aaPredicted RBP13.16□□□□□ -0.3
UBR3-201ENST00000272793 LCTP09848 1927 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 FAM104BQ5XKR9 115 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 LINC01559Q495D7 138 aa13.16□□□□□ -0.3
UBR3-201ENST00000272793 RREB1Q92766 1687 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 F5H768 121 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 RSPO4Q2I0M5 234 aaPredicted RBP13.15□□□□□ -0.3
UBR3-201ENST00000272793 CD160O95971 181 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 AMELYQ99218 206 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 TM4SF5O14894 197 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 YBX2Q9Y2T7 364 aaKnown RBP13.15□□□□□ -0.3
UBR3-201ENST00000272793 IGLV3-16A0A075B6K0 115 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 DLEU1O43261 78 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 IL18BPO95998 194 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 C1QAP02745 245 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 RNF125Q96EQ8 232 aa13.15□□□□□ -0.3
UBR3-201ENST00000272793 MP68P56378 58 aa13.15□□□□□ -0.31
UBR3-201ENST00000272793 C9orf40Q8IXQ3 194 aa13.15□□□□□ -0.31
UBR3-201ENST00000272793 METRNQ9UJH8 293 aa13.15□□□□□ -0.31
UBR3-201ENST00000272793 CD55P08174 381 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 SRP19P09132 144 aaKnown RBP13.14□□□□□ -0.31
UBR3-201ENST00000272793 TMEM30BQ3MIR4 351 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 TMEM92Q6UXU6 159 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 LIMS2Q7Z4I7 341 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 C1QL2Q7Z5L3 287 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 IGHV1OR15-9A0A0B4J2B8 117 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 RPL15P61313 204 aaKnown RBP13.14□□□□□ -0.31
UBR3-201ENST00000272793 CLPSL2Q6UWE3 100 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 SYNJ2BPP57105 145 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 OR11H6Q8NGC7 330 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 C15orf61A6NNL5 157 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 TIMM23O14925 209 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 MUSTN1Q8IVN3 82 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 PCNX3Q9H6A9 2034 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 CSPG4Q6UVK1 2322 aa13.14□□□□□ -0.31
UBR3-201ENST00000272793 A0A087WWL8 130 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 ZNF708P17019 499 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 CCL20P78556 96 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 SPSB3Q6PJ21 355 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 CASC2Q6XLA1 102 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 SPANXDQ9BXN6 97 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 B5MCH6 92 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 PRR4Q16378 134 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 ZNF319Q9P2F9 582 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 PYYP10082 97 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 DEPPQ9NTK1 212 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 NXPH4O95158 308 aa13.13□□□□□ -0.31
UBR3-201ENST00000272793 CELA2AP08217 269 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms