RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 C9orf50Q5SZB4 431 aa12.5□□□□□ -0.41
AFF4-201ENST00000265343 RAMP3O60896 148 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 EVI2AP22794 236 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 RASL10AQ92737 203 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 REPIN1Q9BWE0 567 aaKnown RBP12.49□□□□□ -0.41
AFF4-201ENST00000265343 MRAPQ8TCY5 172 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 GAGE12HA6NDE8 117 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 LINC00158P58513 81 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 CCL21O00585 134 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 GREM1O60565 184 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 CDKN1BP46527 198 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 PROB1E7EW31 1015 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 C3orf79P0CE67 100 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 CSRP3P50461 194 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 UBL5Q9BZL1 73 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 CSPG4Q6UVK1 2322 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 LEAP2Q969E1 77 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 CRIM1Q9NZV1 1036 aa12.49□□□□□ -0.41
AFF4-201ENST00000265343 IGHV1-24A0A0C4DH33 117 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.48□□□□□ -0.41
AFF4-201ENST00000265343 GTSCR1Q86UQ5 136 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 NBR2O15453 112 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 K7EP34 96 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 GNG5P63218 68 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 ADARB2-AS1A8MUL3 147 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 PAX4O43316 350 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 CEP192Q8TEP8 1941 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 PCNX3Q9H6A9 2034 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 PRR32B1ATL7 298 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 FCN3O75636 299 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 ZNF784Q8NCA9 323 aaPredicted RBP12.48□□□□□ -0.41
AFF4-201ENST00000265343 SHISA3A0PJX4 238 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 LYL1P12980 280 aa12.48□□□□□ -0.41
AFF4-201ENST00000265343 DUTP33316 252 aaKnown RBP12.48□□□□□ -0.41
AFF4-201ENST00000265343 hDV102S1A0JD36 115 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 TIMM21Q9BVV7 248 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
AFF4-201ENST00000265343 TRGV9Q99603 122 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 TMEM126AQ9H061 195 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 FAM231BA6NCW3 169 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 IGLV3-21P80748 117 aaPredicted RBP12.47□□□□□ -0.41
AFF4-201ENST00000265343 J3QRE1 110 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 OR13A1Q8NGR1 328 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 GAGE12JA6NER3 117 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 GAGE7O76087 117 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 GAGE12FP0CL80 117 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 GAGE12GP0CL81 117 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 GAGE12IP0CL82 117 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 GAGE4Q13068 117 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 THSD7AQ9UPZ6 1657 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 MUC4Q99102 2169 aa12.47□□□□□ -0.41
AFF4-201ENST00000265343 IGKV1D-33P01593 117 aa12.46□□□□□ -0.41
AFF4-201ENST00000265343 IGKV1-33P01594 117 aa12.46□□□□□ -0.41
AFF4-201ENST00000265343 ZNRF1Q8ND25 227 aa12.46□□□□□ -0.41
AFF4-201ENST00000265343 SLAQ13239 276 aa12.46□□□□□ -0.42
AFF4-201ENST00000265343 PDE6HQ13956 83 aa12.46□□□□□ -0.42
AFF4-201ENST00000265343 SMIM10L1P0DMW3 83 aa12.46□□□□□ -0.42
AFF4-201ENST00000265343 SMIM10Q96HG1 83 aa12.46□□□□□ -0.42
AFF4-201ENST00000265343 SPSB2Q99619 263 aa12.46□□□□□ -0.42
AFF4-201ENST00000265343 DPH3P1Q9H4G8 78 aa12.46□□□□□ -0.42
AFF4-201ENST00000265343 C1QL2Q7Z5L3 287 aa12.46□□□□□ -0.42
AFF4-201ENST00000265343 OR11H6Q8NGC7 330 aa12.46□□□□□ -0.42
AFF4-201ENST00000265343 EIF4EBP2Q13542 120 aaPredicted RBP12.45□□□□□ -0.42
AFF4-201ENST00000265343 TRAV8-3A0A0A6YYJ7 113 aa12.45□□□□□ -0.42
AFF4-201ENST00000265343 CENPVQ7Z7K6 275 aaPredicted RBP12.45□□□□□ -0.42
AFF4-201ENST00000265343 IGKV3-20P01619 116 aa12.45□□□□□ -0.42
AFF4-201ENST00000265343 SIGLEC15Q6ZMC9 328 aa12.45□□□□□ -0.42
AFF4-201ENST00000265343 PRR7Q8TB68 274 aa12.45□□□□□ -0.42
AFF4-201ENST00000265343 SLC25A28Q96A46 364 aa12.45□□□□□ -0.42
AFF4-201ENST00000265343 WDR83OSQ9Y284 106 aa12.45□□□□□ -0.42
AFF4-201ENST00000265343 TMEM256Q8N2U0 113 aa12.45□□□□□ -0.42
AFF4-201ENST00000265343 PRRC2AP48634 2157 aaKnown RBP12.45□□□□□ -0.42
AFF4-201ENST00000265343 A0A1B0GWJ7 208 aa12.45□□□□□ -0.42
AFF4-201ENST00000265343 PLA2G2FQ9BZM2 168 aa12.45□□□□□ -0.42
AFF4-201ENST00000265343 H0YIZ8 118 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 PDLIM4P50479 330 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 SPATA31B1PQ5VZV4 182 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 SRXN1Q9BYN0 137 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 CMC4P56277 68 aaPredicted RBP12.44□□□□□ -0.42
AFF4-201ENST00000265343 LINC00114Q6XXX2 140 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 LINC01545Q5VT33 79 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 AZU1P20160 251 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 ITLN2Q8WWU7 325 aaPredicted RBP12.44□□□□□ -0.42
AFF4-201ENST00000265343 A0A1W2PPM0 123 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 SIVA1O15304 175 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 MORN2Q502X0 79 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 TREML4Q6UXN2 200 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 GAGE5Q13069 117 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 GAGE6Q13070 117 aa12.44□□□□□ -0.42
AFF4-201ENST00000265343 VGLL1Q99990 258 aa12.43□□□□□ -0.42
AFF4-201ENST00000265343 ZNF71Q9NQZ8 489 aaPredicted RBP12.43□□□□□ -0.42
AFF4-201ENST00000265343 ACYP1P07311 99 aa12.43□□□□□ -0.42
AFF4-201ENST00000265343 PF4P02776 101 aa12.43□□□□□ -0.42
AFF4-201ENST00000265343 APOBEC3AP31941 199 aaPredicted RBP12.43□□□□□ -0.42
AFF4-201ENST00000265343 MRPS18CQ9Y3D5 142 aaKnown RBP12.43□□□□□ -0.42
AFF4-201ENST00000265343 IGKV3D-20A0A0C4DH25 116 aa12.43□□□□□ -0.42
AFF4-201ENST00000265343 WFDC1Q9HC57 220 aa12.43□□□□□ -0.42
AFF4-201ENST00000265343 POLR3KQ9Y2Y1 108 aaPredicted RBP12.43□□□□□ -0.42
AFF4-201ENST00000265343 PTPN13Q12923 2485 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms