RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 Q8TCH9 128 aa13.25□□□□□ -0.29
GPC1-201ENST00000264039 EYSQ5T1H1 3165 aa13.25□□□□□ -0.29
GPC1-201ENST00000264039 SCRT2Q9NQ03 307 aa13.25□□□□□ -0.29
GPC1-201ENST00000264039 UFC1Q9Y3C8 167 aa13.25□□□□□ -0.29
GPC1-201ENST00000264039 GAGE12HA6NDE8 117 aa13.25□□□□□ -0.29
GPC1-201ENST00000264039 G3V4G9 280 aa13.25□□□□□ -0.29
GPC1-201ENST00000264039 MRPL32Q9BYC8 188 aaKnown RBP13.25□□□□□ -0.29
GPC1-201ENST00000264039 FCGR2BP31994 310 aaPredicted RBP13.24□□□□□ -0.29
GPC1-201ENST00000264039 PRR20EP86478 221 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 PRR20CP86479 221 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 PRR20DP86480 221 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 PRR20BP86481 221 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 PRR20AP86496 221 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 MZT1Q08AG7 82 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 ZNF329Q86UD4 541 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 ZNF479Q96JC4 524 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 IGHV3-35A0A0C4DH35 117 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 A0A1W2PPM0 123 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 H3BRM9 83 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 SRSF9Q13242 221 aaKnown RBP eCLIP13.24□□□□□ -0.29
GPC1-201ENST00000264039 ITLN1Q8WWA0 313 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 IFI27L1Q96BM0 104 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 JMJD8Q96S16 334 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 FOXC2Q99958 501 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 ATG2AQ2TAZ0 1938 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 IGHV3OR16-8A0A075B7F1 116 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 SCGB2A1O75556 95 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 Q8N7P7 452 aa13.24□□□□□ -0.29
GPC1-201ENST00000264039 STXBP6Q8NFX7 210 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 CPAMD8Q8IZJ3 1885 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 EVI2AP22794 236 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 WFDC2Q14508 124 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 PPP1R32Q7Z5V6 425 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 AMN1Q8IY45 258 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 FAM216BQ8N7L0 139 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 ATP6V0BQ99437 205 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 C19orf24Q9BVV8 132 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 LINC00470Q9BZP3 86 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 TRAV26-1A0A087WT03 109 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 H7C2G1 150 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 J3KRW8 73 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 SMAD7O15105 426 aaKnown RBP13.23□□□□□ -0.29
GPC1-201ENST00000264039 IGLV2-8P01709 118 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 FTH1P19P0C7X4 201 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 CCL8P80075 99 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 ATP5G2Q06055 141 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 UTF1Q5T230 341 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 NPFFR1Q9GZQ6 430 aa13.23□□□□□ -0.29
GPC1-201ENST00000264039 MALRD1Q5VYJ5 2156 aa13.22□□□□□ -0.29
GPC1-201ENST00000264039 ATP5L2Q7Z4Y8 100 aa13.22□□□□□ -0.29
GPC1-201ENST00000264039 ZNF503Q96F45 646 aa13.22□□□□□ -0.29
GPC1-201ENST00000264039 CHTOPQ9Y3Y2 248 aaKnown RBP13.22□□□□□ -0.29
GPC1-201ENST00000264039 PROP1O75360 226 aa13.22□□□□□ -0.29
GPC1-201ENST00000264039 C16orf54Q6UWD8 224 aa13.22□□□□□ -0.29
GPC1-201ENST00000264039 TMEM189A5PLL7 270 aa13.22□□□□□ -0.29
GPC1-201ENST00000264039 CCL11P51671 97 aa13.22□□□□□ -0.29
GPC1-201ENST00000264039 RASL11AQ6T310 242 aa13.22□□□□□ -0.29
GPC1-201ENST00000264039 TNFSF15O95150 251 aa13.21□□□□□ -0.29
GPC1-201ENST00000264039 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
GPC1-201ENST00000264039 DEFB104AQ8WTQ1 72 aa13.21□□□□□ -0.29
GPC1-201ENST00000264039 HIGD1AQ9Y241 93 aa13.21□□□□□ -0.29
GPC1-201ENST00000264039 UPK2O00526 184 aa13.21□□□□□ -0.29
GPC1-201ENST00000264039 PRCDQ00LT1 54 aa13.21□□□□□ -0.29
GPC1-201ENST00000264039 Q0VFX4 171 aa13.21□□□□□ -0.29
GPC1-201ENST00000264039 SLC25A2Q9BXI2 301 aa13.21□□□□□ -0.29
GPC1-201ENST00000264039 MRPL20Q9BYC9 149 aaKnown RBP13.21□□□□□ -0.29
GPC1-201ENST00000264039 GEMIN7Q9H840 131 aaKnown RBP13.21□□□□□ -0.29
GPC1-201ENST00000264039 TMEM249Q2WGJ8 235 aa13.21□□□□□ -0.3
GPC1-201ENST00000264039 TMEM213A2RRL7 107 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 K7ESF4 209 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 FAM106CPP0CH98 169 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 FOXE3Q13461 319 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 VMA21Q3ZAQ7 101 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 FAM106AQ4KMX7 169 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 OR4X2Q8NGF9 303 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 CCL17Q92583 94 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 TNFRSF1AP19438 455 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 ERVK11-1P61568 191 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 GTSF1Q8WW33 167 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 AAMDCQ9H7C9 122 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 DKK2Q9UBU2 259 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 CGB1A6NKQ9 187 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 M0R3E3 92 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 NDUFA3O95167 84 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 APOMO95445 188 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 DUX4L9Q6RFH8 374 aaPredicted RBP13.2□□□□□ -0.3
GPC1-201ENST00000264039 LINC00322Q6ZN03 302 aaPredicted RBP13.2□□□□□ -0.3
GPC1-201ENST00000264039 RASL11BQ9BPW5 248 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 ZNF747Q9BV97 191 aa13.2□□□□□ -0.3
GPC1-201ENST00000264039 HES1Q14469 280 aa13.19□□□□□ -0.3
GPC1-201ENST00000264039 C21orf140B9A014 251 aa13.19□□□□□ -0.3
GPC1-201ENST00000264039 IGLV3-19P01714 112 aa13.19□□□□□ -0.3
GPC1-201ENST00000264039 CCL3L1P16619 93 aa13.19□□□□□ -0.3
GPC1-201ENST00000264039 GAGE13Q4V321 117 aa13.19□□□□□ -0.3
GPC1-201ENST00000264039 ATP1A1-AS1Q5TC04 95 aa13.19□□□□□ -0.3
GPC1-201ENST00000264039 ORMDL3Q8N138 153 aa13.19□□□□□ -0.3
GPC1-201ENST00000264039 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
GPC1-201ENST00000264039 HBDP02042 147 aa13.18□□□□□ -0.3
GPC1-201ENST00000264039 TCRAP04437 139 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms