RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 C1orf229Q6ZS94 237 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 TMEM105Q8N8V8 129 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 DEFB104AQ8WTQ1 72 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 SLC25A2Q9BXI2 301 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 CHODLQ9H9P2 273 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 ASPMQ8IZT6 3477 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 A0A1B0GUT8 65 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 CKS2P33552 79 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 DLX1P56177 255 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 BCL6BQ8N143 479 aaPredicted RBP12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 VSTM2AQ8TAG5 236 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 C1orf159Q96HA4 380 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 JMJD8Q96S16 334 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 SIGMAR1Q99720 223 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 MRPL20Q9BYC9 149 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 CNIH1O95406 144 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 CECR9P0C854 216 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 SMIM13P0DJ93 91 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 CCL3L1P16619 93 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 RIGQ13278 110 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 MBNL2Q5VZF2 373 aaKnown RBP12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 SH2D6Q7Z4S9 175 aa12.92□□□□□ -0.34
PRPF40B-201ENST00000261897 IGKV1D-17A0A075B6S4 117 aa12.91□□□□□ -0.34
PRPF40B-201ENST00000261897 ZADH2Q8N4Q0 377 aa12.91□□□□□ -0.34
PRPF40B-201ENST00000261897 D6R8Y8 96 aa12.91□□□□□ -0.34
PRPF40B-201ENST00000261897 KIR2DS2P43631 304 aa12.91□□□□□ -0.34
PRPF40B-201ENST00000261897 ADAMTSL5Q6ZMM2 481 aa12.91□□□□□ -0.34
PRPF40B-201ENST00000261897 TMEM160Q9NX00 188 aa12.91□□□□□ -0.34
PRPF40B-201ENST00000261897 DLL1O00548 723 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 SEC11AP67812 179 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 TRIP6Q15654 476 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 GTSF1Q8WW33 167 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 PRSS47A8MTI9 375 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 TWIST1Q15672 202 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 WDR31Q8NA23 367 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 SCRT2Q9NQ03 307 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 A0A1B0GV72 72 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 J3QW42 95 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 EVI2AP22794 236 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 RHOGP84095 191 aa12.9□□□□□ -0.34
PRPF40B-201ENST00000261897 TMEM265A0A087WTH1 108 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 LOXL1Q08397 574 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 SPRNQ5BIV9 151 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 AMN1Q8IY45 258 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 IGF2BP2-AS1Q96M15 143 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 PRELID3AQ96N28 172 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 LOC107984156A0A0G2JMH3 177 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 C9orf118A6NHY6 69 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 UPK2O00526 184 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 COX8AP10176 69 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 GTSCR1Q86UQ5 136 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 ARL17AQ8IVW1 177 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 EXPH5Q8NEV8 1989 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 IGKV3D-15A0A087WSY6 115 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 IQCF6A8MYZ5 107 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 J3KRW8 73 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 K7EQM0 130 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 M0R3E3 92 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 TNFSF15O95150 251 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 PRCDQ00LT1 54 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 Q71RC1 249 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 CCL17Q92583 94 aa12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 CHCHD1Q96BP2 118 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 SRSF8Q9BRL6 282 aaKnown RBP12.89□□□□□ -0.35
PRPF40B-201ENST00000261897 A0A1B0GWB2 263 aa12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 TMEM213A2RRL7 107 aa12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 URB1-AS1Q96HZ7 61 aa12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 C21orf140B9A014 251 aa12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 H3BVH4 76 aa12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 ORM1P02763 201 aa12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 FCGR2BP31994 310 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 C15orf65H3BRN8 121 aa12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 RNASE2P10153 161 aaKnown RBP12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 NRN1LQ496H8 165 aa12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 ZNF418Q8TF45 676 aaPredicted RBP12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 LTBP2Q14767 1821 aa12.88□□□□□ -0.35
PRPF40B-201ENST00000261897 ARPC1AQ92747 370 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 MRPL32Q9BYC8 188 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 LRP4O75096 1905 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 E7EUB6 86 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 K7EP34 96 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 HSD52Q0P140 79 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 ZNF766Q5HY98 468 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 HIF1ANQ9NWT6 349 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 RPUSD1Q9UJJ7 312 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 H3BMG7 143 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 TNFAIP6P98066 277 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 TMEM249Q2WGJ8 235 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 TMEM14BQ9NUH8 114 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 MRPL36Q9P0J6 103 aaKnown RBP12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 DKK2Q9UBU2 259 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 FOXA2Q9Y261 457 aaPredicted RBP12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 CFAP47Q6ZTR5 3102 aa12.87□□□□□ -0.35
PRPF40B-201ENST00000261897 CGB1A6NKQ9 187 aa12.86□□□□□ -0.35
PRPF40B-201ENST00000261897 TNFRSF1AP19438 455 aa12.86□□□□□ -0.35
PRPF40B-201ENST00000261897 C11orf53Q8IXP5 236 aa12.86□□□□□ -0.35
PRPF40B-201ENST00000261897 HIST1H4GQ99525 98 aa12.86□□□□□ -0.35
PRPF40B-201ENST00000261897 MS4A6AQ9H2W1 248 aa12.86□□□□□ -0.35
PRPF40B-201ENST00000261897 CKS1BP61024 79 aa12.86□□□□□ -0.35
PRPF40B-201ENST00000261897 GCSAMQ8N6F7 178 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms