RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 PPOXP50336 477 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 PRR20EP86478 221 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 PRR20CP86479 221 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 PRR20DP86480 221 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 PRR20BP86481 221 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 PRR20AP86496 221 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 SPANXN5Q5MJ07 72 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 Q6AWC8 147 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 FAM122CQ6P4D5 195 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 FAM24BQ8N5W8 94 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 KIR3DL3Q8N743 410 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 OR4X2Q8NGF9 303 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 OR4C13Q8NGP0 309 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 OR9G1Q8NH87 305 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 PPP1R1CQ8WVI7 109 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 MMP24Q9Y5R2 645 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 TRAV9-1A0A075B6T8 112 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 SSSCA1O60232 199 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 SLC25A5P05141 298 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 MFAP4P55083 255 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 SNRPD3P62318 126 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 C10orf113Q5VZT2 155 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 OR8G2PQ6IF36 304 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 TEX261Q6UWH6 196 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 ZNF645Q8N7E2 425 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 SFT2D1Q8WV19 159 aa4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 LSM10Q969L4 123 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 CISD1Q9NZ45 108 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-201ENST00000260810 I3L2K1 104 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 GAS8-AS1O95177 125 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TRGC1P0CF51 173 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 SLC25A16P16260 332 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 LEPP41159 167 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 RPS10P46783 165 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 ATP5G2Q06055 141 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 PHLDA2Q53GA4 152 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 DGAT2L7PQ6IED9 249 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 LYG1Q8N1E2 194 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 WNT10AQ9GZT5 417 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 ZFAND3Q9H8U3 227 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TP53TG3Q9ULZ0 132 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 UFC1Q9Y3C8 167 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 HAX1O00165 279 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 YPEL1O60688 119 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 DUSP14O95147 198 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 NDUFB4O95168 129 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 SCGB1D1O95968 90 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 GUK1Q16774 197 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TMEM177Q53S58 311 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 SPATA31B1PQ5VZV4 182 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 LINC00311Q8N616 119 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 YPEL2Q96QA6 119 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 P2RX4Q99571 388 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 SMIM7Q9BQ49 75 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 MRPL20Q9BYC9 149 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 RPH3ALQ9UNE2 315 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 SOCS3O14543 225 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 PRM2P04554 102 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 IGF1P05019 195 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 RPL7P18124 248 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 SULT1A1P50225 295 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 CRIP2P52943 208 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 SUMO1P63165 101 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 FABP9Q0Z7S8 132 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 LTC4SQ16873 150 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 LEMD1Q68G75 181 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TMEM70Q9BUB7 260 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 MCRIP2Q9BUT9 160 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 OR2C1O95371 312 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 CLDN14O95500 239 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 AMBPP02760 352 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 FAM71F2Q6NXP2 309 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 GSX2Q9BZM3 304 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 IGHV2-26A0A0B4J1V2 119 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 UBE2L6O14933 153 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 NMUP48645 174 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TMEM33P57088 247 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 RUNX1Q01196 453 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TNXAQ16473 311 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TMEM241Q24JQ0 296 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TEPPQ6URK8 271 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 SRSF8Q9BRL6 282 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 CLEC7AQ9BXN2 247 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 QTRT1Q9BXR0 403 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TMEM191AQ9H0A3 160 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 VCX2Q9H322 139 aa4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 TMA7Q9Y2S6 64 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-201ENST00000260810 IGHV3-48P01763 117 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 ASIPP42127 132 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 JOSD1Q15040 202 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 SAPCD1Q5SSQ6 148 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 NPFFR1Q9GZQ6 430 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 OR2D2Q9H210 308 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 BIRC6Q9NR09 4857 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 LOC105371242A0A075B767 164 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 CTXND1A0A1B0GTU2 59 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 HYPMO75409 117 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 HTR1DP28221 377 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 FFAR4Q5NUL3 377 aa4.3□□□□□ -1.72
TOPBP1-201ENST00000260810 IL17RELQ6ZVW7 336 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms