RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 TMEM249Q2WGJ8 235 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 HEATR1Q9H583 2144 aaKnown RBP8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 IGKV2-40A0A087WW87 121 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 IGHV2OR16-5A0A0B4J2B6 119 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 E9PLN8 166 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 IGKV2D-40P01614 121 aaPredicted RBP8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 ETDBQ3ZM63 59 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 ZC2HC1BQ5TFG8 222 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 C2orf82Q6UX34 121 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 TMEM14EPQ6UXP3 125 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 RNF182Q8N6D2 247 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 ATP6V0BQ99437 205 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 SLC25A15Q9Y619 301 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 IGLV3-32A0A0A0MS00 114 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 H3BRM9 83 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 M0R2P5 195 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 IGKV1D-33P01593 117 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 IGKV1-33P01594 117 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 RPRMLQ8N4K4 120 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 TNFRSF14Q92956 283 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 NTF4P34130 210 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 LAGE3Q14657 143 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 ATXN8Q156A1 80 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 CLEC19AQ6UXS0 136 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 NCOR1P1Q9H4R4 102 aa8.04□□□□□ -1.12
CTDSPL2-201ENST00000260327 IGLV3-19P01714 112 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 IGLL1P15814 213 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 TMPRSS3P57727 454 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 Q0VG73 95 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 C9JAW5 83 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 GLRXP35754 106 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 LTBRP36941 435 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 SPTBN1Q01082 2364 aaKnown RBP8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 C10orf55Q5SWW7 151 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 CLEC2AQ6UVW9 174 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 Q6ZRM9 215 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 DOCK7Q96N67 2140 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 DUX5Q96PT3 197 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 MBNL3Q9NUK0 354 aaKnown RBP8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 C9orf118A6NHY6 69 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 RASL11AQ6T310 242 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 C18orf32Q8TCD1 76 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 WISP1O95388 367 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 PPBPP02775 128 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 PRCDQ00LT1 54 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 ASCL4Q6XD76 172 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 SLC25A48Q6ZT89 311 aaKnown RBP8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 PLNP26678 52 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 RNF125Q96EQ8 232 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 CYYR1Q96J86 154 aa8.03□□□□□ -1.12
CTDSPL2-201ENST00000260327 FAM106AQ4KMX7 169 aa8.02□□□□□ -1.12
CTDSPL2-201ENST00000260327 ORMDL2Q53FV1 153 aa8.02□□□□□ -1.12
CTDSPL2-201ENST00000260327 ASPHD1Q5U4P2 390 aa8.02□□□□□ -1.12
CTDSPL2-201ENST00000260327 ZCCHC24Q8N2G6 241 aaKnown RBP8.02□□□□□ -1.12
CTDSPL2-201ENST00000260327 ZNF48Q96MX3 618 aaPredicted RBP8.02□□□□□ -1.12
CTDSPL2-201ENST00000260327 CNOT1A5YKK6 2376 aaKnown RBP8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 YPEL1O60688 119 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 TMEM158Q8WZ71 300 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 YPEL2Q96QA6 119 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 SMPXQ9UHP9 88 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 PSPNO60542 156 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 DOCK8Q8NF50 2099 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 PMS2P5A8MQ11 134 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 CCL25O15444 150 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 TRGV3P03979 118 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 AMN1Q8IY45 258 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 PRDM6Q9NQX0 595 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 SPTBN2O15020 2390 aa8.02□□□□□ -1.13
CTDSPL2-201ENST00000260327 TRAV8-3A0A0A6YYJ7 113 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 CD7P09564 240 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 TMEM30BQ3MIR4 351 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 SS18L2Q9UHA2 77 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 H7C1H1 209 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 C9orf153Q5TBE3 101 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 KLF12Q9Y4X4 402 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 KLF2Q9Y5W3 355 aaPredicted RBP8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 F2Z2F3 143 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 SNRPD3P62318 126 aaKnown RBP8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 ZNF562Q6V9R5 426 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 TMEM101Q96IK0 257 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 RBMY1BA6NDE4 496 aaKnown RBP8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 GAGE12HA6NDE8 117 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 RBMY1EA6NEQ0 496 aaKnown RBP8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 K7EP34 96 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 RBMY1DP0C7P1 496 aaKnown RBP8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 RBMY1A1P0DJD3 496 aaKnown RBP8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 RBMY1CP0DJD4 496 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 CDKN1BP46527 198 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 ZNF726P1Q15940 193 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 C20orf204Q6ZNR8 217 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 GGNQ86UU5 652 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 C9orf106Q8NAJ2 232 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 CD28P10747 220 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 FOXF2Q12947 444 aa8.01□□□□□ -1.13
CTDSPL2-201ENST00000260327 TRAV40A0A0B4J280 105 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 LOC102723996A0A087X1L8 192 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 C8orf46Q8TAG6 207 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 ARPC1AQ92747 370 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 TM4SF5O14894 197 aa8□□□□□ -1.13
CTDSPL2-201ENST00000260327 ZNF524Q96C55 264 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms