RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 KIR2DL5BA0A0G2JN68 375 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 KIR2DL5BA0A0G2JPC4 375 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 FNDC10F2Z333 226 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 DEDDO75618 318 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 CST7O76096 145 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 KIR2DL5AQ8N109 375 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 OR1B1Q8NGR6 318 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 KIR2DL5BQ8NHK3 375 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 OVOL2Q9BRP0 275 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 DOK5Q9P104 306 aa13.24□□□□□ -0.29
SNRPA1-201ENST00000254193 NBEAL2Q6ZNJ1 2754 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 KNCNA6PVL3 124 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 UBE2CO00762 179 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 SLC38A11Q08AI6 406 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 DEFB135Q30KP9 77 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 PSMG4Q5JS54 123 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 C1orf194Q5T5A4 169 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 TMEM217Q8N7C4 229 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 MUC7Q8TAX7 377 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 GGACTQ9BVM4 153 aa13.23□□□□□ -0.29
SNRPA1-201ENST00000254193 IGSF23A1L1A6 192 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 SSNA1O43805 119 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 LINC00869P0C866 280 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 TEPPQ6URK8 271 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 Q6ZWC4 215 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 OR8I2Q8N0Y5 310 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 TMEM147Q9BVK8 224 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 CSTL1Q9H114 145 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 SLC25A22Q9H936 323 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 LYRM2Q9NU23 88 aaPredicted RBP13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 SLC45A2Q9UMX9 530 aa13.22□□□□□ -0.29
SNRPA1-201ENST00000254193 ZNF98A6NK75 572 aa13.21□□□□□ -0.29
SNRPA1-201ENST00000254193 SPRY2O43597 315 aa13.21□□□□□ -0.29
SNRPA1-201ENST00000254193 SELENOTP62341 195 aa13.21□□□□□ -0.29
SNRPA1-201ENST00000254193 LRRC37A5PQ49AS3 106 aa13.21□□□□□ -0.29
SNRPA1-201ENST00000254193 TMEM252Q8N6L7 170 aa13.21□□□□□ -0.29
SNRPA1-201ENST00000254193 NMES1Q9C002 83 aa13.21□□□□□ -0.29
SNRPA1-201ENST00000254193 FBXL17Q9UF56 701 aa13.21□□□□□ -0.29
SNRPA1-201ENST00000254193 HYPMO75409 117 aa13.2□□□□□ -0.3
SNRPA1-201ENST00000254193 SULT1A1P50225 295 aa13.2□□□□□ -0.3
SNRPA1-201ENST00000254193 H2BFSP57053 126 aa13.2□□□□□ -0.3
SNRPA1-201ENST00000254193 SNRPD3P62318 126 aaKnown RBP13.2□□□□□ -0.3
SNRPA1-201ENST00000254193 ACTL10Q5JWF8 245 aa13.2□□□□□ -0.3
SNRPA1-201ENST00000254193 STHQ8IWL8 128 aa13.2□□□□□ -0.3
SNRPA1-201ENST00000254193 SCRT1Q9BWW7 348 aa13.2□□□□□ -0.3
SNRPA1-201ENST00000254193 SLC25A32Q9H2D1 315 aa13.2□□□□□ -0.3
SNRPA1-201ENST00000254193 C3orf84H3BNL1 204 aa13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 AGPAT2O15120 278 aa13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 OR5G3P0C626 314 aa13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 RAP2BP61225 183 aa13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 STX12Q86Y82 276 aa13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 RNF183Q96D59 192 aa13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 MGST2Q99735 147 aa13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 SLC25A39Q9BZJ4 359 aaPredicted RBP13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 HIGD1AQ9Y241 93 aa13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 TP53TG1Q9Y2A0 90 aa13.19□□□□□ -0.3
SNRPA1-201ENST00000254193 H0YIZ8 118 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 RLN2P04090 185 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 LYL1P12980 280 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 PLP1P60201 277 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 CYCSP99999 105 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 PATE2Q6UY27 113 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 TRPT1Q86TN4 253 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 UHRF2Q96PU4 802 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 SHANK2-AS3Q9BTD1 123 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 RSG1Q9BU20 258 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 ARL6Q9H0F7 186 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 SEPSECSQ9HD40 501 aaKnown RBP13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 UQCC1Q9NVA1 299 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 OR5AC2Q9NZP5 309 aa13.18□□□□□ -0.3
SNRPA1-201ENST00000254193 H3BRN7 92 aa13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 SOCS3O14543 225 aa13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 PTTG1O95997 202 aa13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 CA1P00915 261 aaPredicted RBP13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 S100A11P31949 105 aa13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 GALR1P47211 349 aa13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 ZFAND6Q6FIF0 208 aa13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 C17orf77Q96MU5 243 aa13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 LINC00052Q96N35 136 aa13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 ALG5Q9Y673 324 aa13.17□□□□□ -0.3
SNRPA1-201ENST00000254193 E5RGE8 158 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 S100A7P31151 101 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 ID1P41134 155 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 CAMLGP49069 296 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 DEFB1P60022 68 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 HBG1P69891 147 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 HBG2P69892 147 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 VWC2Q2TAL6 325 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 PPP1R1CQ8WVI7 109 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 WDR83OSQ9Y284 106 aa13.16□□□□□ -0.3
SNRPA1-201ENST00000254193 UBE2L5PA0A1B0GUS4 154 aa13.15□□□□□ -0.3
SNRPA1-201ENST00000254193 GIG44P09565 113 aaPredicted RBP13.15□□□□□ -0.3
SNRPA1-201ENST00000254193 PSMB3P49720 205 aa13.15□□□□□ -0.3
SNRPA1-201ENST00000254193 NHLH2Q02577 135 aa13.15□□□□□ -0.3
SNRPA1-201ENST00000254193 RAB31Q13636 194 aa13.15□□□□□ -0.3
SNRPA1-201ENST00000254193 CASC10Q5T4H9 136 aa13.15□□□□□ -0.3
SNRPA1-201ENST00000254193 GPR82Q96P67 336 aa13.15□□□□□ -0.3
SNRPA1-201ENST00000254193 ARV1Q9H2C2 271 aa13.15□□□□□ -0.3
SNRPA1-201ENST00000254193 EWSR1Q01844 656 aaKnown RBP eCLIP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms