RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 NAGKQ9UJ70 344 aa13.75□□□□□ -0.21
LRFN3-201ENST00000246529 ITPR1Q14643 2758 aa13.75□□□□□ -0.21
LRFN3-201ENST00000246529 SRIP30626 198 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 TPPP2P59282 170 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 Q0VG73 95 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 GDF5OSQ5U4N7 250 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 FAM231DQ6ZW35 169 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 EXOC3-AS1Q8N2X6 119 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 NUP35Q8NFH5 326 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 ZNF586Q9NXT0 402 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 TRAV8-1A0A0A6YYK1 113 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 ODF3BA8MYP8 253 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 MT-ND6P03923 174 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 ZFP36P26651 326 aaKnown RBP13.74□□□□□ -0.21
LRFN3-201ENST00000246529 SLAQ13239 276 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 REC114Q7Z4M0 266 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 GRAMD2BQ96HH9 432 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 ATG101Q9BSB4 218 aa13.74□□□□□ -0.21
LRFN3-201ENST00000246529 POLR3KQ9Y2Y1 108 aaPredicted RBP13.74□□□□□ -0.21
LRFN3-201ENST00000246529 PRTN3P24158 256 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 KIR3DL3Q8N743 410 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 KLF12Q9Y4X4 402 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 RNF114Q9Y508 228 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 SPTBN1Q01082 2364 aaKnown RBP13.73□□□□□ -0.21
LRFN3-201ENST00000246529 VWC2LB2RUY7 222 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 TCRAP04437 139 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 ESDP10768 282 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 RPL19P84098 196 aaKnown RBP13.73□□□□□ -0.21
LRFN3-201ENST00000246529 USF2Q15853 346 aaPredicted RBP13.73□□□□□ -0.21
LRFN3-201ENST00000246529 VMO1Q7Z5L0 202 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 NEU4Q8WWR8 484 aaPredicted RBP13.73□□□□□ -0.21
LRFN3-201ENST00000246529 C17orf77Q96MU5 243 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 RBM14Q96PK6 669 aaKnown RBP13.73□□□□□ -0.21
LRFN3-201ENST00000246529 NEU1Q99519 415 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 SAMD10Q9BYL1 202 aa13.73□□□□□ -0.21
LRFN3-201ENST00000246529 ZNF331Q9NQX6 463 aaPredicted RBP13.73□□□□□ -0.21
LRFN3-201ENST00000246529 ZNF705FA8MVS1 300 aaPredicted RBP13.72□□□□□ -0.21
LRFN3-201ENST00000246529 M0R1W7 72 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 APCSP02743 223 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 ZNF705DP0CH99 300 aaPredicted RBP13.72□□□□□ -0.21
LRFN3-201ENST00000246529 ZNF705BP0CI00 300 aaPredicted RBP13.72□□□□□ -0.21
LRFN3-201ENST00000246529 CEACAM3P40198 252 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 C5orf17Q8NAS9 161 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 TMEM68Q96MH6 324 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 GPR82Q96P67 336 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 HIGD1CA8MV81 97 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 TCF24Q7RTU0 167 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 BCL6BQ8N143 479 aaPredicted RBP13.72□□□□□ -0.21
LRFN3-201ENST00000246529 TBX15Q96SF7 602 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 ASCL2Q99929 193 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 MED13LQ71F56 2210 aa13.72□□□□□ -0.21
LRFN3-201ENST00000246529 NCBP2LA6PVI3 153 aaKnown RBP13.71□□□□□ -0.21
LRFN3-201ENST00000246529 ZNF253O75346 499 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 NDUFA3O95167 84 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 HLA-DQA1P01909 254 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 PAFAH1B2P68402 229 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 NDPQ00604 133 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 NPBQ8NG41 125 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 MLST8Q9BVC4 326 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 SSBP4Q9BWG4 385 aaPredicted RBP13.71□□□□□ -0.21
LRFN3-201ENST00000246529 MRPL27Q9P0M9 148 aaKnown RBP13.71□□□□□ -0.21
LRFN3-201ENST00000246529 CAMPP49913 170 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 C5orf64Q2M2E5 130 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 TDRG1Q3Y452 100 aa13.71□□□□□ -0.21
LRFN3-201ENST00000246529 NOL4LQ96MY1 436 aaPredicted RBP13.71□□□□□ -0.21
LRFN3-201ENST00000246529 TOMM40O96008 361 aa13.7□□□□□ -0.22
LRFN3-201ENST00000246529 HIST1H1EP10412 219 aaKnown RBP13.7□□□□□ -0.22
LRFN3-201ENST00000246529 GPR6P46095 362 aaPredicted RBP13.7□□□□□ -0.22
LRFN3-201ENST00000246529 TSKUQ8WUA8 353 aa13.7□□□□□ -0.22
LRFN3-201ENST00000246529 LTAP01374 205 aa13.7□□□□□ -0.22
LRFN3-201ENST00000246529 TOMM20LQ6UXN7 152 aa13.7□□□□□ -0.22
LRFN3-201ENST00000246529 SRSF8Q9BRL6 282 aaKnown RBP13.7□□□□□ -0.22
LRFN3-201ENST00000246529 IGHV3-23P01764 117 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 PMCHP20382 165 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 GOLT1AQ6ZVE7 132 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 FMC1Q96HJ9 113 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 UBTD1Q9HAC8 227 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 IL4P05112 153 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 BRS3P32247 399 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 COX19Q49B96 90 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 DTX2Q86UW9 622 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 CIARTQ8N365 385 aaPredicted RBP13.69□□□□□ -0.22
LRFN3-201ENST00000246529 FBXL7Q9UJT9 491 aa13.69□□□□□ -0.22
LRFN3-201ENST00000246529 A0A1W2PS18 150 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 GPX1P07203 203 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 HOXB4P17483 251 aaPredicted RBP13.68□□□□□ -0.22
LRFN3-201ENST00000246529 OR10J3Q5JRS4 329 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 ZNF491Q8N8L2 437 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 FANCD2OSQ96PS1 177 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 OTORQ9NRC9 128 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 PRNTQ86SH4 94 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 SIGLECL1Q8N7X8 197 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 SHANK2-AS3Q9BTD1 123 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 RPP21Q9H633 154 aaKnown RBP13.68□□□□□ -0.22
LRFN3-201ENST00000246529 TMEM14CQ9P0S9 112 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 TBL2Q9Y4P3 447 aaKnown RBP13.68□□□□□ -0.22
LRFN3-201ENST00000246529 HIVEP3Q5T1R4 2406 aa13.68□□□□□ -0.22
LRFN3-201ENST00000246529 FAM19A2Q8N3H0 131 aa13.67□□□□□ -0.22
LRFN3-201ENST00000246529 VN1R17PQ8TDU5 208 aa13.67□□□□□ -0.22
LRFN3-201ENST00000246529 GTSF1Q8WW33 167 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms