RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 NDUFS7O75251 213 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 FAM106CPP0CH98 169 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 FAM106AQ4KMX7 169 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 DYNLRB1Q9NP97 96 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 TP73-AS1Q9UF72 201 aa10.53□□□□□ -0.72
VAMP4-201ENST00000236192 C21orf140B9A014 251 aa10.52□□□□□ -0.72
VAMP4-201ENST00000236192 SHISA2Q6UWI4 295 aa10.52□□□□□ -0.72
VAMP4-201ENST00000236192 SMRP1Q8NCR6 262 aa10.52□□□□□ -0.72
VAMP4-201ENST00000236192 TDRD6O60522 2096 aaKnown RBP10.52□□□□□ -0.73
VAMP4-201ENST00000236192 FAM53AQ6NSI3 398 aaPredicted RBP10.52□□□□□ -0.73
VAMP4-201ENST00000236192 NTN5Q8WTR8 489 aaPredicted RBP10.52□□□□□ -0.73
VAMP4-201ENST00000236192 SHISA9B4DS77 424 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 CFHR2P36980 270 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 ID1P41134 155 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 FGFBP3Q8TAT2 258 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 SRXN1Q9BYN0 137 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 IGHV3OR15-7A0A075B7D8 119 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 E9PLN8 166 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 LMO7DNF2Z398 122 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 CRXO43186 299 aaPredicted RBP10.52□□□□□ -0.73
VAMP4-201ENST00000236192 FAM104BQ5XKR9 115 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 ZNF441Q8N8Z8 693 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 NUP37Q8NFH4 326 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 FLVCR1-AS1Q8TAF5 88 aa10.52□□□□□ -0.73
VAMP4-201ENST00000236192 TNFRSF1AP19438 455 aa10.51□□□□□ -0.73
VAMP4-201ENST00000236192 M0R2P5 195 aa10.51□□□□□ -0.73
VAMP4-201ENST00000236192 LGALS1P09382 135 aaKnown RBP10.51□□□□□ -0.73
VAMP4-201ENST00000236192 GTSF1Q8WW33 167 aa10.51□□□□□ -0.73
VAMP4-201ENST00000236192 IGHV1OR21-1A0A087WYE8 117 aa10.51□□□□□ -0.73
VAMP4-201ENST00000236192 IGKV3D-11A0A0A0MRZ8 115 aa10.51□□□□□ -0.73
VAMP4-201ENST00000236192 MRPL23Q16540 153 aaKnown RBP10.51□□□□□ -0.73
VAMP4-201ENST00000236192 C8orf46Q8TAG6 207 aa10.51□□□□□ -0.73
VAMP4-201ENST00000236192 ZNF837Q96EG3 531 aaPredicted RBP10.51□□□□□ -0.73
VAMP4-201ENST00000236192 Q86TA4 180 aa10.51□□□□□ -0.73
VAMP4-201ENST00000236192 M0QXV9 152 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 CRYGCP07315 174 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 HLA-DMBP28068 263 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 COLCA1Q6ZS62 124 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 LEAP2Q969E1 77 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 PHLDA3Q9Y5J5 127 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 TMEM30BQ3MIR4 351 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 PEAR1Q5VY43 1037 aaPredicted RBP10.5□□□□□ -0.73
VAMP4-201ENST00000236192 C20orf204Q6ZNR8 217 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 PRO1854Q9UHT4 67 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 TNRC6AQ8NDV7 1962 aaKnown RBP10.5□□□□□ -0.73
VAMP4-201ENST00000236192 TRAV12-3A0A0B4J271 114 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 E9PLD3 99 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 ZNF415Q09FC8 603 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 NEU4Q8WWR8 484 aaPredicted RBP10.5□□□□□ -0.73
VAMP4-201ENST00000236192 BADQ92934 168 aa10.5□□□□□ -0.73
VAMP4-201ENST00000236192 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 FOXC1Q12948 553 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 ANKRD29Q8N6D5 301 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 MGAMO43451 1857 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 FRMPD3Q5JV73 1810 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 M0R1B8 84 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 CCL5P13501 91 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 TCF15Q12870 199 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 ACP7Q6ZNF0 438 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 UBALD2Q8IYN6 164 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 DEFB127Q9H1M4 99 aa10.49□□□□□ -0.73
VAMP4-201ENST00000236192 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.48□□□□□ -0.73
VAMP4-201ENST00000236192 FOXF2Q12947 444 aa10.48□□□□□ -0.73
VAMP4-201ENST00000236192 ODF3L1Q8IXM7 274 aa10.48□□□□□ -0.73
VAMP4-201ENST00000236192 PROCRQ9UNN8 238 aa10.48□□□□□ -0.73
VAMP4-201ENST00000236192 KLF13Q9Y2Y9 288 aaPredicted RBP10.48□□□□□ -0.73
VAMP4-201ENST00000236192 DOCK9Q9BZ29 2069 aa10.48□□□□□ -0.73
VAMP4-201ENST00000236192 LINC00473A8K010 186 aa10.48□□□□□ -0.73
VAMP4-201ENST00000236192 IGHG4P01861 327 aa10.48□□□□□ -0.73
VAMP4-201ENST00000236192 DGAT2L7PQ6IED9 249 aa10.48□□□□□ -0.73
VAMP4-201ENST00000236192 RNF7Q9UBF6 113 aa10.48□□□□□ -0.73
VAMP4-201ENST00000236192 TRAV3A0A0B4J244 114 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 CLPSP04118 112 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 LINC00310P59036 64 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 C3orf56Q8N813 242 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 IGF2BP2-AS1Q96M15 143 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 COL9A1P20849 921 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 PRDM6Q9NQX0 595 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 WNT9BO14905 357 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 FGF6P10767 208 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 ASPHD1Q5U4P2 390 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 FSCN3Q9NQT6 498 aa10.47□□□□□ -0.73
VAMP4-201ENST00000236192 LYZL6O75951 148 aa10.46□□□□□ -0.73
VAMP4-201ENST00000236192 TNFAIP6P98066 277 aaPredicted RBP10.46□□□□□ -0.73
VAMP4-201ENST00000236192 MRPL35Q9NZE8 188 aaKnown RBP10.46□□□□□ -0.73
VAMP4-201ENST00000236192 PRSS46E5RG02 174 aa10.46□□□□□ -0.73
VAMP4-201ENST00000236192 ASCC3Q8N3C0 2202 aaKnown RBP10.46□□□□□ -0.73
VAMP4-201ENST00000236192 ACYP1P07311 99 aa10.46□□□□□ -0.74
VAMP4-201ENST00000236192 MRPL51Q4U2R6 128 aaKnown RBP10.46□□□□□ -0.74
VAMP4-201ENST00000236192 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.46□□□□□ -0.74
VAMP4-201ENST00000236192 PRADC1Q9BSG0 188 aa10.46□□□□□ -0.74
VAMP4-201ENST00000236192 DOCK3Q8IZD9 2030 aa10.46□□□□□ -0.74
VAMP4-201ENST00000236192 SAA1P0DJI8 122 aaPredicted RBP10.46□□□□□ -0.74
VAMP4-201ENST00000236192 TRAV8-3A0A0A6YYJ7 113 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 FAM236AA0A1B0GUQ0 79 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 FAM236BA0A1B0GV22 79 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 CCDC179H3BU77 68 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 UTF1Q5T230 341 aa10.45□□□□□ -0.74
VAMP4-201ENST00000236192 Q8N8P6 123 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms