RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 Q6P435 159 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 ZNF329Q86UD4 541 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 GFRA4Q9GZZ7 299 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 PGPEP1Q9NXJ5 209 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 TRAV8-1A0A0A6YYK1 113 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 RPL15P61313 204 aaKnown RBP11.34□□□□□ -0.59
HCFC2-201ENST00000229330 CFHR1Q03591 330 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 EXOC3-AS1Q8N2X6 119 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 LINC00479Q96M42 142 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 SPTBN2O15020 2390 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 IGHV3-49A0A0A0MS15 119 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 PLNP26678 52 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 SCRT1Q9BWW7 348 aa11.34□□□□□ -0.59
HCFC2-201ENST00000229330 CSRP1P21291 193 aaKnown RBP11.33□□□□□ -0.6
HCFC2-201ENST00000229330 IFI27P40305 119 aaPredicted RBP11.33□□□□□ -0.6
HCFC2-201ENST00000229330 CEP250Q9BV73 2442 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 COX8AP10176 69 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 PYGO2Q9BRQ0 406 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 DOCK11Q5JSL3 2073 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 IGLC7A0M8Q6 106 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 H7C1H1 209 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 CEACAM4O75871 244 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 TOMM40O96008 361 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 SLAQ13239 276 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 FNDC10F2Z333 226 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 PDLIM4P50479 330 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 Q6ZVH6 145 aa11.33□□□□□ -0.6
HCFC2-201ENST00000229330 NPIPB5A8MRT5 1133 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 CCL3L1P16619 93 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 SLC25A39Q9BZJ4 359 aaPredicted RBP11.32□□□□□ -0.6
HCFC2-201ENST00000229330 NCOR1O75376 2440 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 WDR81Q562E7 1941 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 LOC102723996A0A087X1L8 192 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 TNFRSF14Q92956 283 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 FNDC1Q4ZHG4 1894 aaPredicted RBP11.32□□□□□ -0.6
HCFC2-201ENST00000229330 IGHV3OR16-8A0A075B7F1 116 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 NPFFO15130 113 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 FOXL2NBQ6ZUU3 175 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 OR13C6PQ8NH95 151 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
HCFC2-201ENST00000229330 LRRK1Q38SD2 2015 aa11.32□□□□□ -0.6
HCFC2-201ENST00000229330 IGHV2-70DA0A0C4DH43 119 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 TMEM238C9JI98 176 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 F8W1H4 67 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 SLC50A1Q9BRV3 221 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 RTTNQ86VV8 2226 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 TRAV12-3A0A0B4J271 114 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 ARPC1AQ92747 370 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 GAGE12HA6NDE8 117 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 PMS2P5A8MQ11 134 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 MLNRO43193 412 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 AZU1P20160 251 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 HAPLN4Q86UW8 402 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 RCHY1Q96PM5 261 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 SMIM27A0A1W2PRY6 76 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 PRR19A6NJB7 356 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 LINC00205P59089 165 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 ZFP36L1Q07352 338 aaKnown RBP11.31□□□□□ -0.6
HCFC2-201ENST00000229330 DDB2Q92466 427 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 DPM3Q9P2X0 92 aa11.31□□□□□ -0.6
HCFC2-201ENST00000229330 IGHV1-24A0A0C4DH33 117 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 A0A1W2PPM0 123 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 TNFRSF18Q9Y5U5 241 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 ETDBQ3ZM63 59 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 TRGV9Q99603 122 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 YAE1D1Q9NRH1 226 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 MGAMO43451 1857 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 C9orf172C9J069 976 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 FOXG1P55316 489 aaPredicted RBP11.3□□□□□ -0.6
HCFC2-201ENST00000229330 FAM106AQ4KMX7 169 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 C10orf55Q5SWW7 151 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 SPANXA1Q9NS26 97 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 PSMB11A5LHX3 300 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
HCFC2-201ENST00000229330 MYOD1P15172 320 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 GGNQ86UU5 652 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 DYNLRB2Q8TF09 96 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 TMEM158Q8WZ71 300 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 ZNF48Q96MX3 618 aaPredicted RBP11.3□□□□□ -0.6
HCFC2-201ENST00000229330 TSC2P49815 1807 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.3□□□□□ -0.6
HCFC2-201ENST00000229330 PAX1P15863 534 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 ATXN8Q156A1 80 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 AMN1Q8IY45 258 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
HCFC2-201ENST00000229330 RNASE4P34096 147 aaKnown RBP11.29□□□□□ -0.6
HCFC2-201ENST00000229330 LINC01549A6NIU2 74 aa11.29□□□□□ -0.6
HCFC2-201ENST00000229330 MOB4Q9Y3A3 225 aa11.29□□□□□ -0.6
HCFC2-201ENST00000229330 PLXNA3P51805 1871 aa11.29□□□□□ -0.6
HCFC2-201ENST00000229330 C17orf82Q86X59 251 aaPredicted RBP11.29□□□□□ -0.6
HCFC2-201ENST00000229330 IGKV1-39P01597 117 aa11.29□□□□□ -0.6
HCFC2-201ENST00000229330 IGKV1D-39P04432 117 aa11.29□□□□□ -0.6
HCFC2-201ENST00000229330 VDAC2P45880 294 aaPredicted RBP11.29□□□□□ -0.6
HCFC2-201ENST00000229330 CSTL1Q9H114 145 aa11.29□□□□□ -0.6
HCFC2-201ENST00000229330 ZNF492Q9P255 531 aa11.29□□□□□ -0.6
HCFC2-201ENST00000229330 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
HCFC2-201ENST00000229330 IGKV2-40A0A087WW87 121 aaPredicted RBP11.28□□□□□ -0.6
HCFC2-201ENST00000229330 IGKV2D-40P01614 121 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms