RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 STXBP6Q8NFX7 210 aa11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 IMMP2LQ96T52 175 aa11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 NEU1Q99519 415 aa11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 SLC25A39Q9BZJ4 359 aaPredicted RBP11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 RNASE7Q9H1E1 156 aaKnown RBP11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 PRDM13Q9H4Q3 707 aa11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 MRPL27Q9P0M9 148 aaKnown RBP11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 SH2D7A6NKC9 451 aaPredicted RBP11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 F8W735 103 aaPredicted RBP11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 PEX7O00628 323 aa11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 GOSR1O95249 250 aa11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 TYMSP04818 313 aa11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 ERVFC1-1P60608 527 aa11.34□□□□□ -0.59
PRKAB1-201ENST00000229328 ZNF320A2RRD8 509 aa11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 NDUFB8O95169 186 aa11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 IGHV3-23P01764 117 aa11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 BRS3P32247 399 aa11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 BCL6BQ8N143 479 aaPredicted RBP11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 SPOCK3Q9BQ16 436 aa11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 V9GYV3 84 aa11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 PGPA6NDG6 321 aa11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 S100A2P29034 98 aa11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 RAB4BP61018 213 aa11.33□□□□□ -0.6
PRKAB1-201ENST00000229328 ISLRO14498 428 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 TCAPO15273 167 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 OR2J3O76001 311 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 GCGP01275 180 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 HLA-DRB1P01911 266 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 MGST1P10620 155 aaKnown RBP11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 DDTP30046 118 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 CDX1P47902 265 aaPredicted RBP11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 PDZD11Q5EBL8 140 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 CLEC2AQ6UVW9 174 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 BRD3OSQ6XYD6 125 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 ZNF491Q8N8L2 437 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 IL36BQ9NZH7 164 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 C1RLQ9NZP8 487 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 CDC42EP3Q9UKI2 254 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 ACTL10Q5JWF8 245 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 SGK494Q96LW2 274 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 EPDR1Q9UM22 224 aa11.32□□□□□ -0.6
PRKAB1-201ENST00000229328 FAM208BQ5VWN6 2430 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 LINC01548A6NM66 108 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 GNG7O60262 68 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 TOMM40O96008 361 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 IL4P05112 153 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 CNN1P51911 297 aaKnown RBP11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 RPL15P61313 204 aaKnown RBP11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 CYB5R2Q6BCY4 276 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 C2orf88Q9BSF0 95 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 ZNF586Q9NXT0 402 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 RPH3ALQ9UNE2 315 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 UBR5O95071 2799 aaPredicted RBP11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 HIST1H1BP16401 226 aaKnown RBP11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 MFAP4P55083 255 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 SRSF1Q07955 248 aaKnown RBP eCLIP11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 ZNF843Q8N446 348 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 RNF125Q96EQ8 232 aa11.31□□□□□ -0.6
PRKAB1-201ENST00000229328 FBN2P35556 2912 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 NDUFS8O00217 210 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 ATP6V0E1O15342 81 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 Q56UQ5 140 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 TMEM219Q86XT9 240 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 GPR61Q9BZJ8 451 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 Q9H3A6 140 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 C21orf62Q9NYP8 219 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 SOX21Q9Y651 276 aaPredicted RBP11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 TRAV40A0A0B4J280 105 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 FRMD6-AS1P0C7T7 363 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 USF2Q15853 346 aaPredicted RBP11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 ECSCRQ19T08 205 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 LBHQ53QV2 105 aaPredicted RBP11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 HIST3H2BBQ8N257 126 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 SHANK2-AS3Q9BTD1 123 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 GAR1Q9NY12 217 aaKnown RBP11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 LRRK2Q5S007 2527 aa11.3□□□□□ -0.6
PRKAB1-201ENST00000229328 IGHV1-69DA0A0B4J2H0 117 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 WI2-2373I1.2A0A1W2PRP0 233 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 H3BRN7 92 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 IGHV1-69P01742 117 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 OSTCQ9NRP0 149 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 CENPEQ02224 2701 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 OR2T8A6NH00 312 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 IGHV4-38-2P0DP08 117 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 PKIAP61925 76 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 ANKRD39Q53RE8 183 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 BAGE2Q86Y30 109 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 TMEM14CQ9P0S9 112 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 FBXL7Q9UJT9 491 aa11.29□□□□□ -0.6
PRKAB1-201ENST00000229328 TSTD3H0UI37 97 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 YPEL3P61236 119 aaPredicted RBP11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 RPEL1Q2QD12 228 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 IBA57Q5T440 356 aaKnown RBP11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 UNQ5815/PRO19632Q6UWF5 114 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 OR8I2Q8N0Y5 310 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 EXOC3-AS1Q8N2X6 119 aa11.28□□□□□ -0.6
PRKAB1-201ENST00000229328 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms