RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MS4A6AQ9H2W1 248 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 PRDM13Q9H4Q3 707 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 D6R8Y8 96 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 HIST1H4AP62805 103 aaKnown RBP10.85□□□□□ -0.67
COL1A1-201ENST00000225964 Q8TAT8 98 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 WFDC1Q9HC57 220 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 DNAJC13O75165 2243 aa10.85□□□□□ -0.67
COL1A1-201ENST00000225964 SAA4P35542 130 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 LYZL1Q6UWQ5 148 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 LINC00587B1AMM8 73 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 CRYGSP22914 178 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 LCN12Q6JVE5 192 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 TMEM170AQ8WVE7 144 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 LCTP09848 1927 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 TRAV3A0A0B4J244 114 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 TBX6O95947 436 aaPredicted RBP10.84□□□□□ -0.67
COL1A1-201ENST00000225964 LINC00477Q96M19 166 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 MSRB2Q9Y3D2 182 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 F5H768 121 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 TMEM155Q4W5P6 130 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 CSTL1Q9H114 145 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 RPL32P62910 135 aaKnown RBP10.84□□□□□ -0.67
COL1A1-201ENST00000225964 C9orf139Q6ZV77 190 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 GNB1LQ9BYB4 327 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 TRAV13-1A0A0B4J241 112 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 IFITM2Q01629 132 aa10.84□□□□□ -0.67
COL1A1-201ENST00000225964 SVILO95425 2214 aa10.83□□□□□ -0.67
COL1A1-201ENST00000225964 A0A087WWL8 130 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 TREML4Q6UXN2 200 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 TRGV9Q99603 122 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 MGST2Q99735 147 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 DAD1P61803 113 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 SNRNP200O75643 2136 aaKnown RBP10.83□□□□□ -0.68
COL1A1-201ENST00000225964 IGKV1D-8A0A087WSZ0 117 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 RHPN1-AS1Q9BWJ2 59 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 IGKV1-12A0A0C4DH73 117 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 IGKV1D-12P01611 117 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 CSRP3P50461 194 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 EREGO14944 169 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 SBF1O95248 1867 aa10.83□□□□□ -0.68
COL1A1-201ENST00000225964 LINC01619G3V211 115 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 SRSF4Q08170 494 aaKnown RBP10.82□□□□□ -0.68
COL1A1-201ENST00000225964 PRR30Q53SZ7 412 aaPredicted RBP10.82□□□□□ -0.68
COL1A1-201ENST00000225964 ARID1AO14497 2285 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 DEFB131AP59861 70 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 LINC00518Q8N0U6 118 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 NABP1Q96AH0 204 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 LYPD3O95274 346 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 SRSF3P84103 164 aaKnown RBP10.82□□□□□ -0.68
COL1A1-201ENST00000225964 MDS2Q8NDY4 140 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 RNF5Q99942 180 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 GGTLC1Q9BX51 225 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 ABCA7Q8IZY2 2146 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 ITGB1BP1O14713 200 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 LEPROTO15243 131 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 PLEKHB2Q96CS7 222 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 E9PQ18 207 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 MSMBP08118 114 aa10.82□□□□□ -0.68
COL1A1-201ENST00000225964 DMRTC2Q8IXT2 367 aaPredicted RBP10.82□□□□□ -0.68
COL1A1-201ENST00000225964 C14orf178Q8N769 122 aaPredicted RBP10.82□□□□□ -0.68
COL1A1-201ENST00000225964 PSPNO60542 156 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 PSG3Q16557 428 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 LGALS1P09382 135 aaKnown RBP10.81□□□□□ -0.68
COL1A1-201ENST00000225964 IGKV1-27A0A075B6S5 117 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 MST1P26927 711 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 E7EQL1 145 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 VCYO14598 125 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 EFNA2O43921 213 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 LURAP1LQ8IV03 231 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 ORAOV1Q8WV07 137 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 MEGF9Q9H1U4 602 aa10.81□□□□□ -0.68
COL1A1-201ENST00000225964 A8MWV9 139 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
COL1A1-201ENST00000225964 NEUROG3Q9Y4Z2 214 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 ASXL3Q9C0F0 2248 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 TNFSF13O75888 250 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 SIGLEC9Q9Y336 463 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 CGB7P0DN87 165 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 TRAV9-2A0A087WT02 112 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 MBD3L4A6NDZ8 208 aaPredicted RBP10.8□□□□□ -0.68
COL1A1-201ENST00000225964 MBD3L3A6NE82 208 aaPredicted RBP10.8□□□□□ -0.68
COL1A1-201ENST00000225964 MBD3L5A6NJ08 208 aaPredicted RBP10.8□□□□□ -0.68
COL1A1-201ENST00000225964 ZNF561-AS1K7EIQ3 104 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 MBD3L2Q8NHZ7 208 aaPredicted RBP10.8□□□□□ -0.68
COL1A1-201ENST00000225964 ANAPC10Q9UM13 185 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 WDR83OSQ9Y284 106 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 LINC01549A6NIU2 74 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 VWC2LB2RUY7 222 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 NDUFS8O00217 210 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 EDA2RQ9HAV5 297 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 LAMTOR2Q9Y2Q5 125 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 RP1L1Q8IWN7 2480 aaPredicted RBP10.8□□□□□ -0.68
COL1A1-201ENST00000225964 OVOL3O00110 214 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 ZNF562Q6V9R5 426 aa10.8□□□□□ -0.68
COL1A1-201ENST00000225964 ZNF48Q96MX3 618 aaPredicted RBP10.8□□□□□ -0.68
COL1A1-201ENST00000225964 ARHGEF17Q96PE2 2063 aaPredicted RBP10.79□□□□□ -0.68
COL1A1-201ENST00000225964 A8MXK9 166 aa10.79□□□□□ -0.68
COL1A1-201ENST00000225964 SUPT4H1P63272 117 aaKnown RBP10.79□□□□□ -0.68
COL1A1-201ENST00000225964 XCL2Q9UBD3 114 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms