RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 NUP35Q8NFH5 326 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 KCNS1Q96KK3 526 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 TBX15Q96SF7 602 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 LOC105371242A0A075B767 164 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 TRAV30A0A087WSZ9 112 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 A8MWL6 223 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 OOSP1A8MZH6 123 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 TCRAP04437 139 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 GPR6P46095 362 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-201ENST00000221554 GNG5P63218 68 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 RUSC1-AS1Q66K80 236 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 CCDC144NLQ6NUI1 221 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 FAM168AQ92567 244 aa16.72■□□□□ 0.27
CCDC130-201ENST00000221554 SLC25A39Q9BZJ4 359 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-201ENST00000221554 POLR3KQ9Y2Y1 108 aaPredicted RBP16.72■□□□□ 0.27
CCDC130-201ENST00000221554 FAM231BA6NCW3 169 aa16.71■□□□□ 0.27
CCDC130-201ENST00000221554 GRNP28799 593 aaKnown RBP16.71■□□□□ 0.27
CCDC130-201ENST00000221554 SRIP30626 198 aa16.71■□□□□ 0.27
CCDC130-201ENST00000221554 LYZP61626 148 aa16.71■□□□□ 0.27
CCDC130-201ENST00000221554 SLC35B1P78383 322 aa16.71■□□□□ 0.27
CCDC130-201ENST00000221554 ADORA2A-AS1P86434 159 aa16.71■□□□□ 0.27
CCDC130-201ENST00000221554 TEX43Q6ZNM6 134 aa16.71■□□□□ 0.27
CCDC130-201ENST00000221554 SSBP3Q9BWW4 388 aaPredicted RBP16.71■□□□□ 0.27
CCDC130-201ENST00000221554 GFRA4Q9GZZ7 299 aa16.71■□□□□ 0.27
CCDC130-201ENST00000221554 APELAP0DMC3 54 aa16.7■□□□□ 0.26
CCDC130-201ENST00000221554 DLX1P56177 255 aa16.7■□□□□ 0.26
CCDC130-201ENST00000221554 FAM162BQ5T6X4 162 aa16.7■□□□□ 0.26
CCDC130-201ENST00000221554 C11orf71Q6IPW1 123 aa16.7■□□□□ 0.26
CCDC130-201ENST00000221554 LYPD1Q8N2G4 141 aa16.7■□□□□ 0.26
CCDC130-201ENST00000221554 KIR3DL3Q8N743 410 aa16.7■□□□□ 0.26
CCDC130-201ENST00000221554 LINC00469Q8N7U9 141 aa16.7■□□□□ 0.26
CCDC130-201ENST00000221554 DAZAP1Q96EP5 407 aaKnown RBP16.7■□□□□ 0.26
CCDC130-201ENST00000221554 PRSS22Q9GZN4 317 aa16.7■□□□□ 0.26
CCDC130-201ENST00000221554 RPP21Q9H633 154 aaKnown RBP16.7■□□□□ 0.26
CCDC130-201ENST00000221554 ODF3BA8MYP8 253 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 OR2J3O76001 311 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 PRR27Q6MZM9 219 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 MRPL52Q86TS9 123 aaKnown RBP16.69■□□□□ 0.26
CCDC130-201ENST00000221554 CFHR4Q92496 578 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 IGHV3-21A0A0B4J1V1 117 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 CA1P00915 261 aaPredicted RBP16.69■□□□□ 0.26
CCDC130-201ENST00000221554 ARF6P62330 175 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 KLF5Q13887 457 aaPredicted RBP16.69■□□□□ 0.26
CCDC130-201ENST00000221554 TOMM20LQ6UXN7 152 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 BPIFA4PQ86YQ2 179 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 NEU1Q99519 415 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 C20orf144Q9BQM9 153 aa16.69■□□□□ 0.26
CCDC130-201ENST00000221554 P01737 135 aa16.68■□□□□ 0.26
CCDC130-201ENST00000221554 C19orf35Q6ZS72 473 aa16.68■□□□□ 0.26
CCDC130-201ENST00000221554 OR4B1Q8NGF8 309 aa16.68■□□□□ 0.26
CCDC130-201ENST00000221554 ZNF48Q96MX3 618 aaPredicted RBP16.68■□□□□ 0.26
CCDC130-201ENST00000221554 SHANK2-AS3Q9BTD1 123 aa16.68■□□□□ 0.26
CCDC130-201ENST00000221554 ROS1P08922 2347 aa16.67■□□□□ 0.26
CCDC130-201ENST00000221554 PCNX1Q96RV3 2341 aa16.67■□□□□ 0.26
CCDC130-201ENST00000221554 A0A1W2PS18 150 aa16.67■□□□□ 0.26
CCDC130-201ENST00000221554 HIGD1CA8MV81 97 aa16.67■□□□□ 0.26
CCDC130-201ENST00000221554 K7EIM0 57 aa16.67■□□□□ 0.26
CCDC130-201ENST00000221554 ZNF324O75467 553 aaPredicted RBP16.67■□□□□ 0.26
CCDC130-201ENST00000221554 AMTP48728 403 aa16.67■□□□□ 0.26
CCDC130-201ENST00000221554 KIAA1644Q3SXP7 199 aa16.67■□□□□ 0.26
CCDC130-201ENST00000221554 OR4F17Q8NGA8 305 aa16.67■□□□□ 0.26
CCDC130-201ENST00000221554 C19orf71A6NCJ1 209 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 NPIPB5A8MRT5 1133 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 IGKV1-17P01599 117 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 MINOS1Q5TGZ0 78 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 MINOS1-NBL1R4GNA1 71 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 PKDREJQ9NTG1 2253 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 MALRD1Q5VYJ5 2156 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 A0A1B0GXF2 115 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 F2Z2F3 143 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 K7EQM0 130 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 SCGB2A1O75556 95 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 PRB3Q04118 309 aaPredicted RBP16.66■□□□□ 0.26
CCDC130-201ENST00000221554 C5orf64Q2M2E5 130 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 NRN1Q9NPD7 142 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 RPH3ALQ9UNE2 315 aa16.66■□□□□ 0.26
CCDC130-201ENST00000221554 TBL2Q9Y4P3 447 aaKnown RBP16.66■□□□□ 0.26
CCDC130-201ENST00000221554 NAV3Q8IVL0 2385 aa16.65■□□□□ 0.26
CCDC130-201ENST00000221554 H3BRN7 92 aa16.65■□□□□ 0.26
CCDC130-201ENST00000221554 SSTP61278 116 aa16.65■□□□□ 0.26
CCDC130-201ENST00000221554 ZNF562Q6V9R5 426 aa16.65■□□□□ 0.26
CCDC130-201ENST00000221554 DTX2Q86UW9 622 aa16.65■□□□□ 0.26
CCDC130-201ENST00000221554 GSX1Q9H4S2 264 aaPredicted RBP16.65■□□□□ 0.26
CCDC130-201ENST00000221554 HILPDAQ9Y5L2 63 aa16.65■□□□□ 0.26
CCDC130-201ENST00000221554 HOXB4P17483 251 aaPredicted RBP16.64■□□□□ 0.25
CCDC130-201ENST00000221554 HBBP68871 147 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 SLAQ13239 276 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 C18orf32Q8TCD1 76 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 BBC3Q96PG8 261 aaPredicted RBP16.64■□□□□ 0.25
CCDC130-201ENST00000221554 VAMP8Q9BV40 100 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 ZFP30Q9Y2G7 519 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 POLEQ07864 2286 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 NPIPB6E9PJ23 425 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 MFAP4P55083 255 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 LDLRAD2Q5SZI1 272 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 LEMD1Q68G75 181 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 CYB5R2Q6BCY4 276 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 THYN1Q9P016 225 aa16.64■□□□□ 0.25
CCDC130-201ENST00000221554 TRBV19A0A075B6N1 114 aa16.63■□□□□ 0.25
CCDC130-201ENST00000221554 WI2-2373I1.2A0A1W2PRP0 233 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms