RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 BOLA1Q9Y3E2 137 aa20.7■□□□□ 0.9
CHMP4B-201ENST00000217402 TIMM9Q9Y5J7 89 aa20.7■□□□□ 0.9
CHMP4B-201ENST00000217402 IGHV7-4-1A0A0J9YVY3 117 aa20.69■□□□□ 0.9
CHMP4B-201ENST00000217402 COX7A2P2O60397 106 aa20.69■□□□□ 0.9
CHMP4B-201ENST00000217402 PLP1P60201 277 aa20.69■□□□□ 0.9
CHMP4B-201ENST00000217402 GCSAMLQ5JQS6 135 aa20.69■□□□□ 0.9
CHMP4B-201ENST00000217402 PPP1R14BQ96C90 147 aa20.69■□□□□ 0.9
CHMP4B-201ENST00000217402 GNPNAT1Q96EK6 184 aaPredicted RBP20.69■□□□□ 0.9
CHMP4B-201ENST00000217402 CRYBB3P26998 211 aa20.68■□□□□ 0.9
CHMP4B-201ENST00000217402 PATE2Q6UY27 113 aa20.68■□□□□ 0.9
CHMP4B-201ENST00000217402 UHRF2Q96PU4 802 aa20.68■□□□□ 0.9
CHMP4B-201ENST00000217402 SLC25A32Q9H2D1 315 aa20.68■□□□□ 0.9
CHMP4B-201ENST00000217402 MRPL27Q9P0M9 148 aaKnown RBP20.68■□□□□ 0.9
CHMP4B-201ENST00000217402 HIGD1AQ9Y241 93 aa20.68■□□□□ 0.9
CHMP4B-201ENST00000217402 PXDC1Q5TGL8 231 aa20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 PSMG3Q9BT73 122 aaPredicted RBP20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 ARV1Q9H2C2 271 aa20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 SMPXQ9UHP9 88 aa20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 DNHD1Q96M86 4753 aa20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 PRR31Q5SQ13 230 aa20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 TMEM37Q8WXS4 190 aa20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 ST8SIA2Q92186 375 aa20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 MARC2Q969Z3 335 aa20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 NARS2Q96I59 477 aaKnown RBP20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 RHPN1-AS1Q9BWJ2 59 aa20.67■□□□□ 0.9
CHMP4B-201ENST00000217402 TPT1P13693 172 aaKnown RBP20.66■□□□□ 0.9
CHMP4B-201ENST00000217402 IGLL1P15814 213 aa20.66■□□□□ 0.9
CHMP4B-201ENST00000217402 C4BPBP20851 252 aa20.66■□□□□ 0.9
CHMP4B-201ENST00000217402 C10orf113Q5VZT2 155 aa20.66■□□□□ 0.9
CHMP4B-201ENST00000217402 DYNLRB2Q8TF09 96 aa20.66■□□□□ 0.9
CHMP4B-201ENST00000217402 C8orf88P0DMB2 117 aa20.65■□□□□ 0.9
CHMP4B-201ENST00000217402 EIF5AP63241 154 aaKnown RBP20.65■□□□□ 0.9
CHMP4B-201ENST00000217402 OR1L4Q8NGR5 311 aa20.65■□□□□ 0.9
CHMP4B-201ENST00000217402 OR2G3Q8NGZ4 309 aa20.65■□□□□ 0.9
CHMP4B-201ENST00000217402 PFDN5Q99471 154 aa20.65■□□□□ 0.9
CHMP4B-201ENST00000217402 DNAJC4Q9NNZ3 241 aa20.65■□□□□ 0.9
CHMP4B-201ENST00000217402 CHEK1O14757 476 aa20.64■□□□□ 0.9
CHMP4B-201ENST00000217402 SLC51BQ86UW2 128 aa20.64■□□□□ 0.9
CHMP4B-201ENST00000217402 BAP18Q8IXM2 172 aa20.64■□□□□ 0.9
CHMP4B-201ENST00000217402 STOML3Q8TAV4 291 aa20.64■□□□□ 0.9
CHMP4B-201ENST00000217402 MCRIP2Q9BUT9 160 aaKnown RBP20.64■□□□□ 0.9
CHMP4B-201ENST00000217402 SCRT1Q9BWW7 348 aa20.64■□□□□ 0.9
CHMP4B-201ENST00000217402 SLC25A39Q9BZJ4 359 aaPredicted RBP20.64■□□□□ 0.9
CHMP4B-201ENST00000217402 MLXQ9UH92 298 aa20.64■□□□□ 0.9
CHMP4B-201ENST00000217402 U3KQE9 123 aa20.64■□□□□ 0.9
CHMP4B-201ENST00000217402 ELOA3CA0A087WX78 387 aaPredicted RBP20.64■□□□□ 0.89
CHMP4B-201ENST00000217402 LEMD1Q68G75 181 aa20.64■□□□□ 0.89
CHMP4B-201ENST00000217402 LINC00305Q7Z4B0 112 aa20.64■□□□□ 0.89
CHMP4B-201ENST00000217402 RAB2AP61019 212 aa20.63■□□□□ 0.89
CHMP4B-201ENST00000217402 C9orf66Q5T8R8 295 aa20.63■□□□□ 0.89
CHMP4B-201ENST00000217402 VSIRQ9H7M9 311 aa20.63■□□□□ 0.89
CHMP4B-201ENST00000217402 SLC25A22Q9H936 323 aa20.63■□□□□ 0.89
CHMP4B-201ENST00000217402 SIGLEC8Q9NYZ4 499 aa20.63■□□□□ 0.89
CHMP4B-201ENST00000217402 PFDN2Q9UHV9 154 aa20.63■□□□□ 0.89
CHMP4B-201ENST00000217402 A0A1W2PS18 150 aa20.62■□□□□ 0.89
CHMP4B-201ENST00000217402 H3BRN7 92 aa20.62■□□□□ 0.89
CHMP4B-201ENST00000217402 SPP1P10451 314 aa20.62■□□□□ 0.89
CHMP4B-201ENST00000217402 GATAD1Q8WUU5 269 aa20.62■□□□□ 0.89
CHMP4B-201ENST00000217402 RNF2Q99496 336 aa20.62■□□□□ 0.89
CHMP4B-201ENST00000217402 SHANK2-AS3Q9BTD1 123 aa20.62■□□□□ 0.89
CHMP4B-201ENST00000217402 PKD1L1Q8TDX9 2849 aa20.62■□□□□ 0.89
CHMP4B-201ENST00000217402 BUB3O43684 328 aa20.61■□□□□ 0.89
CHMP4B-201ENST00000217402 BMI1P35226 326 aa20.61■□□□□ 0.89
CHMP4B-201ENST00000217402 SERF2P84101 59 aa20.61■□□□□ 0.89
CHMP4B-201ENST00000217402 ACOT6Q3I5F7 207 aaPredicted RBP20.61■□□□□ 0.89
CHMP4B-201ENST00000217402 MORN5Q5VZ52 161 aa20.61■□□□□ 0.89
CHMP4B-201ENST00000217402 GRAMD2BQ96HH9 432 aa20.61■□□□□ 0.89
CHMP4B-201ENST00000217402 TMEM231Q9H6L2 316 aa20.61■□□□□ 0.89
CHMP4B-201ENST00000217402 ZNF98A6NK75 572 aa20.6■□□□□ 0.89
CHMP4B-201ENST00000217402 SEPSECSQ9HD40 501 aaKnown RBP20.6■□□□□ 0.89
CHMP4B-201ENST00000217402 M6PRP20645 277 aa20.6■□□□□ 0.89
CHMP4B-201ENST00000217402 S100A7P31151 101 aa20.6■□□□□ 0.89
CHMP4B-201ENST00000217402 FAM78BQ5VT40 261 aa20.6■□□□□ 0.89
CHMP4B-201ENST00000217402 SPATA31B1PQ5VZV4 182 aa20.6■□□□□ 0.89
CHMP4B-201ENST00000217402 S100A7AQ86SG5 101 aa20.6■□□□□ 0.89
CHMP4B-201ENST00000217402 TMED6Q8WW62 240 aa20.6■□□□□ 0.89
CHMP4B-201ENST00000217402 NOTCH3Q9UM47 2321 aa20.59■□□□□ 0.89
CHMP4B-201ENST00000217402 DEFB114Q30KQ6 69 aa20.59■□□□□ 0.89
CHMP4B-201ENST00000217402 C16orf54Q6UWD8 224 aa20.59■□□□□ 0.89
CHMP4B-201ENST00000217402 SEC11BP0C7V7 166 aa20.58■□□□□ 0.89
CHMP4B-201ENST00000217402 CD300EQ496F6 205 aaPredicted RBP20.58■□□□□ 0.89
CHMP4B-201ENST00000217402 OXLD1Q5BKU9 147 aa20.58■□□□□ 0.89
CHMP4B-201ENST00000217402 OR8I2Q8N0Y5 310 aa20.58■□□□□ 0.89
CHMP4B-201ENST00000217402 OR10G4Q8NGN3 311 aa20.58■□□□□ 0.89
CHMP4B-201ENST00000217402 OR10G9Q8NGN4 311 aa20.58■□□□□ 0.89
CHMP4B-201ENST00000217402 OR10G7Q8NGN6 311 aa20.58■□□□□ 0.89
CHMP4B-201ENST00000217402 TECRQ9NZ01 308 aaKnown RBP20.58■□□□□ 0.89
CHMP4B-201ENST00000217402 TRAV5A0A0B4J249 113 aa20.57■□□□□ 0.88
CHMP4B-201ENST00000217402 IGLV1-51P01701 117 aa20.57■□□□□ 0.88
CHMP4B-201ENST00000217402 INSL3P51460 131 aa20.57■□□□□ 0.88
CHMP4B-201ENST00000217402 AKR1C8PQ5T2L2 129 aa20.57■□□□□ 0.88
CHMP4B-201ENST00000217402 FAM122CQ6P4D5 195 aa20.57■□□□□ 0.88
CHMP4B-201ENST00000217402 GLMPQ8WWB7 406 aa20.57■□□□□ 0.88
CHMP4B-201ENST00000217402 EIF3GO75821 320 aaKnown RBP eCLIP20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 MBP02144 154 aa20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 TMEM41BQ5BJD5 291 aa20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 MIR17HGQ75NE6 70 aa20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 TCF24Q7RTU0 167 aa20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 IGKV3-7A0A075B6H7 116 aa20.56■□□□□ 0.88
CHMP4B-201ENST00000217402 RPL11P62913 178 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 2949.9 ms