RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 PRB2P02812 416 aaPredicted RBP12.2□□□□□ -0.46
SPTLC2-201ENST00000216484 NEU4Q8WWR8 484 aaPredicted RBP12.2□□□□□ -0.46
SPTLC2-201ENST00000216484 MYMXA0A1B0GTQ4 84 aa12.2□□□□□ -0.46
SPTLC2-201ENST00000216484 HAPLN4Q86UW8 402 aa12.2□□□□□ -0.46
SPTLC2-201ENST00000216484 LOC101059948A0A1B0GTJ6 334 aa12.2□□□□□ -0.46
SPTLC2-201ENST00000216484 LOC105371267A0A1B0GV96 52 aa12.2□□□□□ -0.46
SPTLC2-201ENST00000216484 ZNF561-AS1K7EIQ3 104 aa12.2□□□□□ -0.46
SPTLC2-201ENST00000216484 NABP1Q96AH0 204 aa12.2□□□□□ -0.46
SPTLC2-201ENST00000216484 CSTL1Q9H114 145 aa12.2□□□□□ -0.46
SPTLC2-201ENST00000216484 RSPO4Q2I0M5 234 aaPredicted RBP12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 C8orf82Q6P1X6 216 aaPredicted RBP12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 LINC01559Q495D7 138 aa12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 LINC01549A6NIU2 74 aa12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 FOXS1O43638 330 aa12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 Q6ZT83 130 aa12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 CLPSP04118 112 aa12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 RPL15P61313 204 aaKnown RBP12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 NGFRP08138 427 aa12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 C1orf100Q5SVJ3 147 aa12.19□□□□□ -0.46
SPTLC2-201ENST00000216484 PVRIGQ6DKI7 326 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 BAALCQ8WXS3 180 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 SAA2-SAA4A0A096LPE2 208 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 SAA2P0DJI9 122 aaPredicted RBP12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 HIST1H2BLQ99880 126 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 CHAC1Q9BUX1 264 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 YBX2Q9Y2T7 364 aaKnown RBP12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 TNFSF13O75888 250 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 CD5P06127 495 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 OCC1Q8TAD7 63 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 SRRM4A7MD48 611 aaKnown RBP12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 TCF15Q12870 199 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 OSTCQ9NRP0 149 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 F8VVB4 439 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 F8VWA3 439 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 EXOC3-AS1Q8N2X6 119 aa12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 ZNF501Q96CX3 271 aaPredicted RBP12.18□□□□□ -0.46
SPTLC2-201ENST00000216484 TRBV5-7A0A0A0MS05 114 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 TSKUQ8WUA8 353 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 OTOGLQ3ZCN5 2332 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 IGHG4P01861 327 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 LIMS2Q7Z4I7 341 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 C15orf61A6NNL5 157 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 VCYO14598 125 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 KLF17Q5JT82 389 aaPredicted RBP12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 SPG11Q96JI7 2443 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 UBE2CO00762 179 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 CT83Q5H943 113 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 COL22A1Q8NFW1 1626 aaPredicted RBP12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 ZNF319Q9P2F9 582 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 UBE2V1Q13404 147 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 EFNB3Q15768 340 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 MDS2Q8NDY4 140 aa12.17□□□□□ -0.46
SPTLC2-201ENST00000216484 IGLV1-36A0A0B4J1U3 117 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 PMS2P5A8MQ11 134 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 C12orf77C9JDV5 145 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 PLPPR1Q8TBJ4 325 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 SLC25A28Q96A46 364 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 OVOL1O14753 267 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 RASL11AQ6T310 242 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 BHLHA9Q7RTU4 235 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 PRR31Q5SQ13 230 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 PAPPAQ13219 1627 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 SPSB2Q99619 263 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 FAM216BQ8N7L0 139 aa12.16□□□□□ -0.46
SPTLC2-201ENST00000216484 A0A1W2PPI3 338 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 IQCF6A8MYZ5 107 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 IFITM2Q01629 132 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 ATP1A1-AS1Q5TC04 95 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 PILRAQ9UKJ1 303 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 LOC102723996A0A087X1L8 192 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 ATRAIDQ6UW56 229 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 LINC00312Q9Y6C7 94 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 C1QL2Q7Z5L3 287 aa12.15□□□□□ -0.46
SPTLC2-201ENST00000216484 FAM27E3Q08E93 113 aa12.15□□□□□ -0.47
SPTLC2-201ENST00000216484 UBE2E2Q96LR5 201 aa12.15□□□□□ -0.47
SPTLC2-201ENST00000216484 C1QCP02747 245 aa12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 MORN5Q5VZ52 161 aa12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 FOXD3Q9UJU5 478 aaPredicted RBP12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 COX5BP10606 129 aa12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 IGHMP01871 453 aa12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 SLC22A18ASQ8N1D0 253 aa12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 A0A0G2JK05 382 aa12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 DENND4CQ5VZ89 1909 aa12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 PFN2P35080 140 aa12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 SRSF3P84103 164 aaKnown RBP12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 RTBDNQ9BSG5 229 aaPredicted RBP12.14□□□□□ -0.47
SPTLC2-201ENST00000216484 FCN3O75636 299 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 ZNF525Q8N782 197 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 TMEM158Q8WZ71 300 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 CECR9P0C854 216 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 PMVKQ15126 192 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 RPRMLQ8N4K4 120 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 NBL1P41271 181 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 C15orf32Q32M92 178 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 LCN12Q6JVE5 192 aa12.13□□□□□ -0.47
SPTLC2-201ENST00000216484 KIF26AQ9ULI4 1882 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms